Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_21050 LG5 29678379 29679655 PREDICTED: B3 domain-containing protein At2g36080-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
A/G 29678519 missense_variant p.Leu264Pro
T/A 29678932 intron_variant
C/A 29678942 intron_variant
G/T 29678985 intron_variant
T/A 29679015 missense_variant p.Gln214Leu
G/T 29679019 missense_variant p.Pro213Thr
A/T 29679248 missense_variant p.Ser136Arg
C/T 29679483 missense_variant p.Gly58Asp
G/C 29679572 missense_variant p.His28Gln
G/A 29679611 synonymous_variant p.Thr15Thr
T/A 29679620 synonymous_variant p.Leu12Leu
A/T 29679621 missense_variant p.Leu12Gln
T/G 29679623 missense_variant p.Arg11Ser
C/G 29679624 missense_variant p.Arg11Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_21050.1
MSINHYSPEARLYWTDQHQASTWLGNSHTPRFNLNDNQEEVDEEDEEVMEKATAAGAGGEAAAEEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAEKHFPLESSSSSSCGDSAKGVLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLHAGDVVFFHRHRTHPQRFFINSSRRQANPPAHVTTTATPSFYSAHPYPAHQLPFPYQPQSLHAPPGGGSQGQNQTTPGGNSSGGRVLRLFGVNMECQPDKDSQNSTPLSSYTLSSTTTTTTLSHHHLLHPHTTTSFSSSSSSSNPHHHHMLRQQP*


CDS Sequence:
>Vu_21050.1
ATGTCGATAAACCACTACTCACCAGAAGCCAGACTATACTGGACCGACCAACATCAAGCCTCAACGTGGCTCGGAAACTCTCACACTCCTCGTTTCAACCTGAATGACAACCAGGAGGAGGTGGACGAGGAGGACGAGGAGGTGATGGAGAAAGCTACTGCTGCTGGTGCTGGTGGGGAGGCGGCGGCGGAAGAGGAGGAGAAGGAAGCGATGTTCGAGAAGCCGCTGACGCCGAGCGACGTGGGAAAGCTGAACCGGTTGGTGATCCCAAAACAACACGCGGAGAAGCACTTCCCGCTGGAGTCGTCGTCATCGTCGTCGTGCGGTGACAGCGCGAAGGGCGTGTTACTGAGTTTCGAGGACGAGTCCGGGAAGTGCTGGCGTTTCCGTTACTCTTATTGGAACAGTAGCCAGAGTTACGTTTTGACCAAAGGATGGAGCCGTTACGTGAAGGACAAACGCCTCCACGCTGGCGACGTTGTTTTCTTCCACAGACACCGTACCCATCCTCAACGCTTCTTCATCAACTCCTCCCGCCGCCAAGCCAACCCCCCCGCTCACGTTACCACCACCGCAACACCCTCCTTCTACTCTGCGCACCCTTATCCTGCGCATCAGCTCCCTTTCCCATACCAACCTCAGTCCCTTCATGCACCACCAGGTGGAGGGTCCCAAGGACAGAACCAAACGACACCGGGAGGGAACAGTTCAGGTGGCAGGGTGCTGAGGCTGTTTGGGGTGAACATGGAATGCCAACCTGATAAGGATTCCCAAAACTCCACGCCACTATCCTCTTACACTCTCTCCTCAACAACAACAACAACAACACTTTCCCACCACCACCTCTTACACCCTCATACTACTACCTCTTTTTCTTCTTCTTCCTCCTCCTCCAACCCTCACCATCACCACATGCTACGTCAACAACCGTAA


Promoter Sequence:
>Vu_21050::LG5:29679655-29681655(-)
ATATTTTTTTCTCTCTTCTTATTTCTCAGTCAATTCCGAAGATAATTATATATCATACTTCTCTCTTTTTCTGTCTTTTTTTATTGCTGTAAAATTAATTATGCAAGTAGTTGAAGAAATAGTATTTTTGAGAAAACAAGGAAATTTGTTATTTACTTCCATGTAAGCATGTATCATCATTTTACAGGACCCGCCATTTTGATGGTCCCTTCTGTGAATTAATTGCACTCGCCAAGCATTTCTGGTTTATGGGACCGTCGCATCCAAGGTTTCGTGACATGACAGTGAGCATTAACAAGTGTGCATTATTTTCTGATAGAATAAAGCCTCATTGACATCTAATCCTGAAAATGTGCAATATTTCTAATTTCTGATGAATATAATAACTAAAACACACACTGGCCATAGATATTTCTCTGATGACGCCAAGATGATTATTTAATTTGAAAATTCAAATAAAATAAAAAAGAAAAAGAACACCGAACAACTTTTTTATCATATAGATGTGTCCCCAACATATATTTATATATACTTAAACTAAAGAAATGAGTTAAACCTTTTGTAGGGCAAAAAAGGGTGTCTGAATCTACCTGGAAACTGAGGTGGGTTTTGTCTCCAACTCATAGAAAAGACATAATCTAAGTAAAGAAATTATTATATATAGAAGTATGTATAAAAAAATAAAGATGAGTAGACAGCAATAGGACCATATAATAAGTAGAGAGAGAGAGAGAGTGTGATTATGTGTAGCAGAGACATGCGAGGTGGGGATTGAAACACGAATATGATGCAGGATTTGTGTGTTCTGTAATTGGAGAAATGAAATCTGATTACTCTTTGCTAAGTGGAAAGAAGATAGGAGAAAGTTTATGTGTGGAAATAAATTTTTACTCCTCCCATGCCTTTGTTTGTTTGTGCTGTTTTCTTCTCTTGGCTGTCTCCATGACGCATTCAATTTCATGTATAGCTTCCTTAATTTGAAAACCAGGAATGGCCAAACACCAATAATGAAGTCATGCACGTGACACAACACTATTCTTTCATTATCTTCACCATAATACATTTTCAGAAGACTTCAAATGAATCAGACCTATATTCATTTACATTCATATTCAACACACAACTTGTGGAGGACGTACGTGGACCACTCTAAGTTAGTTTTTCCCTCCATCCATGCCACCATTATTCAAATTCACACTATTTTCTCCATTACTAAACATGAGAAAAATATATTTAATATCACCAAAAACAACATATTTAAAGCAGAAAACAGTAGCAATAGTGGTAAGAAGGAGAAATGAAAAATGGTGTGGAGTTAAAGTGTTGAGAATGAAAGAAAGAAAGAAATTATGATGAGTGGTGAGGGTTGGGAGAAAGGGTCCCATCACTTGATTTGTAAGCCAAATTACTAACATGGGATGTCCCTAATTACACCAAATTATTCACCTGTACTCTGCAATCTCTCTCTCTCTCTCTCTCATCCTCACAAACATACATGTTCGGTCCAATTCAGTAATTATTTCATTTTAAAAATCTCACCGTGTCTCACTTACAACACATACAATACAACTCTGCGATCTCATCACACACACACACACACTTTCATTATCATTCCATTTAACAGAACAGAAAAAGCAACCATCCTAATAATACCACCAAGTTCACACGGAAACAAATAAAATAAAAAAACGTTAATTTAAAAAGAAACCGAAAAAAACATCGAAATTCGAAACACCCAAAATAAGACTTTGTCTTTTTATTATTTTTCTTCTTCTTCATATAGTAACGCACTTGGCACATTACATAACCTTAAAGTACTCTGTACTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCATTGTCATATCTTTGCTAGGTCCATCAAACAGGCAGTGATTCCCCCAGCTTCCACATCAAATGAACCCATAATCATTATCATCATCACACGCCCCTTCTCTTCTCTTCTTCCTTCTTTCTCTCTCTATTTACAGCAGCTCTCA


Gene Sequence:
>Vu_21050(-)
ATGTCGATAAACCACTACTCACCAGAAGCCAGACTATACTGGACCGACCAACATCAAGCCTCAACGTGGCTCGGAAACTCTCACACTCCTCGTTTCAACCTGAATGACAACCAGGAGGAGGTGGACGAGGAGGACGAGGAGGTGATGGAGAAAGCTACTGCTGCTGGTGCTGGTGGGGAGGCGGCGGCGGAAGAGGAGGAGAAGGAAGCGATGTTCGAGAAGCCGCTGACGCCGAGCGACGTGGGAAAGCTGAACCGGTTGGTGATCCCAAAACAACACGCGGAGAAGCACTTCCCGCTGGAGTCGTCGTCATCGTCGTCGTGCGGTGACAGCGCGAAGGGCGTGTTACTGAGTTTCGAGGACGAGTCCGGGAAGTGCTGGCGTTTCCGTTACTCTTATTGGAACAGTAGCCAGAGTTACGTTTTGACCAAAGGATGGAGCCGTTACGTGAAGGACAAACGCCTCCACGCTGGCGACGTTGTTTTCTTCCACAGACACCGTACCCATCCTCAACGCTTCTTCATCAACTCCTCCCGCCGCCAAGCCAACCCCCCCGCTCACGTTACCACCACCGCAACACCCTCCTTCTACTCTGCGCACCCTTATCCTGCGCATCAGCTCCCTTTCCCATACCAACCTCAGTCCCTTCATGCACCACCAGGTACGTTATCTTCTGTATATTTATTATTTACACAGTGTTTGGTTTAGTTTTGGATTGGGAAGAAATGTGGGTTAGGAATTGAGTGAGATTGCGTAGAGAAGAGGGAGTGTGCCGCGTGAGGAGCACGCTCGAGATATGGTTGAAGTAAAGGTGGTGAAAAATAGGAATGAGATTTTGAAGATAGGAGGAGGGGTGTTGATAATTTGCAGATGTTTTTGTTGGGTTGGTGGGGTGGAATTTGAAAATGGTATTGTAGTATATGGTTAAAAGAATTGATTGGAACATGAAATGTGTATGATTAAAGCGCGGGCATTTGCACGTGTTGTAATGTTTTTTGCTTACAGGTGGAGGGTCCCAAGGACAGAACCAAACGACACCGGGAGGGAACAGTTCAGGTGGCAGGGTGCTGAGGCTGTTTGGGGTGAACATGGAATGCCAACCTGATAAGGATTCCCAAAACTCCACGCCACTATCCTCTTACACTCTCTCCTCAACAACAACAACAACAACACTTTCCCACCACCACCTCTTACACCCTCATACTACTACCTCTTTTTCTTCTTCTTCCTCCTCCTCCAACCCTCACCATCACCACATGCTACGTCAACAACCGTAA