Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20993 LG5 29154848 29157727 PREDICTED: growth-regulating factor 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated, transcription, DNA-templated, leaf development, transcription, DNA-templated, regulation of transcription, DNA-templated, leaf development, transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   protein binding, ATP binding, protein binding, protein binding, protein binding, ATP binding
SNP Position Effect Amino acid change
G/A 29155302 missense_variant p.Gly80Arg
A/G 29155305 missense_variant p.Thr81Ala
C/T 29155556 downstream_gene_variant
T/C 29155572 downstream_gene_variant
A/G 29155655 downstream_gene_variant
G/A 29155687 downstream_gene_variant
C/T 29155717 downstream_gene_variant
C/T 29155814 downstream_gene_variant
G/A 29155909 downstream_gene_variant
T/A 29156018 downstream_gene_variant
A/G 29156173 missense_variant p.Thr164Ala
G/A 29156292 synonymous_variant p.Arg203Arg
C/T 29156294 missense_variant p.Thr204Ile
T/G 29156295 synonymous_variant p.Thr204Thr
C/T 29156342 missense_variant p.Ser220Phe
A/T 29157024 downstream_gene_variant
C/G 29157589 missense_variant p.Pro334Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20993.1
MDLHLKQWRNQHESEEQHSTKMPKLLPESHQQPQTQSSASALPLFVPEPNSKVSTLSDSTLPATNRFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKSLLHSPHYFLHHPLQHYQPALLQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPSSANCGGSGGGGGTLGLGASSSISSPPLATASLKSPFDLLHLSERSSGTKNEDKSLFENEDNVGGDGRAGGHMLRHFFDDWPRSMQHSDNVENNAAPARINSSTCLSISMPGNASSDVSLKLSTGPTNENVNLQSDQLQLNWAGGWAGGSQVASMGGPLAEALRSSTSTSSPTSVLHHLPPASGSETSFVTT*


CDS Sequence:
>Vu_20993.1
ATGGACTTGCATCTGAAGCAATGGAGAAACCAGCATGAGTCAGAGGAACAACATTCTACAAAGATGCCAAAACTTCTCCCTGAATCCCATCAACAGCCACAAACACAATCATCTGCCTCTGCACTCCCTTTGTTTGTACCTGAACCCAACAGCAAAGTCAGCACCCTGTCAGATTCAACATTACCAGCTACTAACAGATTTCCCAGGATGGGGAGCTACTTCAGCTTGTCTCAGTGGCAGGAACTTGAGTTGCAGGCTTTGATCTTCAGGTACATGTTAGCTGGTGCTGCTGTTCCTCCTGAACTCCTTCAACCAATCAAGAAAAGCCTTCTTCATTCCCCTCACTATTTCCTCCATCACCCTCTCCAACATTACCAACCTGCTTTGCTGCAATCTGGGTATTGGGGTAGAGGAGCGATGGATCCAGAGCCAGGGCGGTGCCGGAGAACTGACGGGAAAAAGTGGCGGTGCTCGAGGGACGTGGTGGCTGGACAAAAGTACTGTGAGCGCCACATGCATCGTGGAAGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAGTAGTGCTAATTGCGGTGGTAGTGGTGGTGGTGGTGGAACTCTAGGACTAGGTGCTTCATCTTCCATTTCTTCACCTCCGCTAGCTACTGCTTCTCTGAAATCCCCTTTTGATCTTCTTCATCTTAGTGAACGCTCTTCTGGGACCAAGAATGAAGACAAGAGCTTGTTTGAAAATGAAGATAATGTGGGTGGGGATGGCAGAGCAGGTGGGCATATGCTGAGGCATTTTTTCGATGATTGGCCAAGATCAATGCAACACTCTGACAACGTTGAAAACAATGCTGCCCCTGCCCGGATAAACTCTTCCACATGTCTTTCTATTTCTATGCCCGGAAATGCTTCCTCAGATGTCTCTTTGAAATTGTCCACTGGCCCAACAAATGAGAATGTCAATCTCCAGTCGGACCAACTGCAGTTGAATTGGGCCGGAGGATGGGCCGGAGGTAGTCAAGTGGCTTCAATGGGTGGGCCACTTGCTGAGGCACTCAGATCATCTACTTCAACTTCATCTCCTACTAGCGTTTTGCATCACTTGCCTCCTGCTTCTGGATCTGAGACCAGCTTCGTTACCACCTGA


Promoter Sequence:
>Vu_20993::LG5:29152848-29154848(+)
AAAAAGGAAATGACTTTGTGTATTCTAATTTTCTAATTAAATATGAAACTATTGTTATGTTAAGAAGTAAACTTTAAGCTTAACTCAATCGACAAAATCGGTTTGTAAAGTGAGGTTTGCACCTACTTATATGTTATAAATTGACCTTATCTCAAGTCAAGGTAGAATTTTCAACACACTCCCTCACACTGAGGTATATACATATCGAACATGAAATTATATATTAATAGATGGTCTGATAACTGTCCGATAACGAGTGGAGTAATGTGTCAAACAAATAATAAATATCGTTAAGATGGACTGTAAAATGATTCTAATACTATGTTAAGTGTTAAGAAGTGAACTTTAAGTCTAATTAAACACTTTCAACATGTTTAAAAAAAAAAAATATATCAGCGGATGTAATGGAAAAAATGTCTTCATGAATTTTAGTAATTTCAAAACAAAATAAAACGAAATGTACATTATTATACTTTGAAATTATGCGTGAAGATAAGAAATAAAAAGAAATGTCCAGTGGTACATTTGTTCACAGTTTTTTTTGTTGAATATAATTTGGACATAATTTCCAACATCATTAATTATTTGAGTATAAGCGAACTCCTCCTTGCAAATCTGGAACCTTGTCTTTCTCTGAGTACAAATTTAACATTCTAATATTCATAAATATGTCAGAGAAAAATCAAATACCTACATGCAACCAATTAATCTCCTGAATTTCCACAGCAATAAAAACATTTTTGGATGTGTAAAAGAAACTAATGTATATCATTAAATATATCATCATTATTTTTTTAATGTTTAAGAATTGAAATAAATGCCAAAAAGACGAGTTAATAAATATACATTTGAACTGAAGCATCCTTGCTTAAATTTCTAACAACTGAAGCATCCTTGTTTTTGTTACTTTAACAAACACTTATATTTTAATAATATTGTTAAAACCAAATGTTGGTAATGCAATATTCTTTTTCCGTACTTTAATTAATAGTAAAATTAGATCTTAAATTTACTCGTAAAACACGACAACAGTTTTTAAATAAAACTAAGAACTGATAACTTAAAAAAAGCAGTTTTTATATAAAATGTGATGTAGGGCATGATAGAAAAGAGAGAAAGAGATTAGATTAGAAGTGAAAATCCCTCGAGATGCTACATGCAAAGACCTATGTGATTAGACGTAAATCGAGATGTTAGTTCCTAAATATGCCGAGTTTACAATAAACCTTGATGTTTAGTGGTTATGGTGAGTTCCTTCAGAGGCTCAAGAAAAAGTGAATAACGAAAACTCATCATCTCATGCAGCTGCAATAGAACTGCACTGTCGGATCAAACCTCCCTATGTCAGTCTTCATTGAAGTGTGTGTTTATCTCTCTCTCTCTCTCTTCTCTCTTTGCAATGGTTCAAACACCGCATTGGTCCAAAACCAACTCATAAAAAATGCATAAAGCAGATGAATATAGTATGATTGTATGCCACTCTACTGTTATAGAGTCCAAGTAGGTGATGATAATAAAATATAGTAAAAAGCTTGTTTTTCCACTTACAAGCCAAGCCCTATGCTATGCTGCTACTGCTTCTTCCCTCGAGTGGTATTTCCAAAGCAAAGCAGAAAGACAAAAACCGCAGGTTCTTTCTTTCATCTCTCTACATATCCATTATTTTATTATTTTCAGCTCTTCTTTTTCCTCTCAACTGTCTTGTCTCACTGTCTTTTTCTCAAGTGCTCTAACCCTTCCCCACTGTCTTCAAAACAAACTTTGCAGGCTTGTTGTCAGAGAGAGCCTTCTCTCTCTCTCTATCTCTCTCTCTCTCTCACACACAGGTATATCTGCCAAAGATATAAAGGAAGCAGGAGAGGACACTGCAAAAGCTTTTTTAAAAACTTGGTCTTTACACATCCATCACACCTAACGAAGTTAATTAGCCACATAGTGGTCACACGCTAATATTAAGCCAGAATTAATAGTGGTGGGTTCTTTCTTTATCTCTCTCTCCA


Gene Sequence:
>Vu_20993(+)
ATGGACTTGCATCTGAAGCAATGGAGAAACCAGCATGAGTCAGAGGAACAACATTCTACAAAGATGCCAAAACTTCTCCCTGAATCCCATCAACAGCCACAAACACAATCATCTGCCTCTGCACTCCCTTTGTTTGTACCTGAACCCAACAGCAAAGTCAGCACCCTGTCAGATTCAACATTACCAGCTACTAACAGATTTCCCAGTAAGATTTTTATTATCTCTTTTCTTCCTTTTGGCAGAAAGAAAGTTTGATTAGCTTCAGGCATTAGTTGCTGCTTACTTTTCACATTTGCTTCTTCCACTACAACCTTACCCACCTTTCTTTTCTTCACCCCACTCCCCCCTTCTTTGGCTCTTACGTTTTCTCTCTTTTTTTTCCCTTTCTGGGGTGGTCTCCTCTTTATTACACCTGTTCAGGGATGGGGAGCTACTTCAGCTTGTCTCAGTGGCAGGAACTTGAGTTGCAGGCTTTGATCTTCAGGTACATGTTAGCTGGTGCTGCTGTTCCTCCTGAACTCCTTCAACCAATCAAGAAAAGCCTTCTTCATTCCCCTCACTATTTCCTCCATCACCCTCTCCAACATTACCAACCTGCTTGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCATCTTTATTACCTCTCTCTTTTTATATTCTCTACTGTCATACACCGTTCTCCAATACATTACGACATTTTTCTCGTGCTTTGTGACCATTCAACTTCCCCAAAGACCTTCTTTTTAGTTTGTTTTTAAATCAACTTCCCCCAAGACATTGATTTACTTGATTAAAGGAAAAAATAGTTTACATTTTGGACAAGACATACTTGTTGCATCGGTGGTGGTTTCATAGCCGACCTCTCGTGTGGAATAAGGAAGATGGTTGTGTTACAGCGACCTTGGAAACCCAATAGGAAGTAAAGAATGATGTAAGACAACCAAAAGCTATAACTAGGAACCTGTTCAAAACACATCCAAGACCTAAAATACAATGACACTGATAAGCCCAACAGTAAATTTCAAAATCTTTAAATGTATAGAATGTGGATCACTTGAGACAAAGGCCAATGACATCACCTAATCTGTATGGTTATCTTATGAGCGGAATAAGGTTTTTTTTATGTTATAACTTATTGCATCATCGTCAGTGTTAACTATTGGTTTAAAAGTGAAGGGAAGAGTTGTGTGAACATGTTTTGTTTGTTGGATCAGTGCTGCAATCTGGGTATTGGGGTAGAGGAGCGATGGATCCAGAGCCAGGGCGGTGCCGGAGAACTGACGGGAAAAAGTGGCGGTGCTCGAGGGACGTGGTGGCTGGACAAAAGTACTGTGAGCGCCACATGCATCGTGGAAGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAGTAGTGCTAATTGCGGTGGTAGTGGTGGTGGTGGTGGAACTCTAGGACTAGGTGCTTCATCTTCCATTTCTTCACCTCCGCTAGCTACTGCTTCTCTGAAATCCCCTTTTGATCTTCTTCATCTTAGTGAACGGTAATCTTAATTCCTTAATGGCTTGGTATGTCTTTGTTTATGTATGTGGTTTGTTAACAAGATGACAGCCTAAGGGTTGTGTTAAGATTTTAGTTTGGACTTAATAATTATGATATGAGTGTGTAATAATAAAAGGCAACTAGCGAGTGAGGTTTGTTTTGGAAAAAGGTTAGTTGTATGTGAGCTTTTGATCTGAAATATGGTGGGGTACACTTTACTTGTGTGGTTTATTTTATTTCCTTTTCTGTCAGTGTCGTTTCTGAGATGAATTCATTGACGTTGAAAAAGTAAGTTTGAATTTGATGCATTCGGATTTGAACAAGTAATCTAAGGAAGGAGATATATGCTTGTGACTTATTGTACTACTGCCTAACTCGGATAGGGACCCCAGTGAGGGTATGGCCACAATGTCTCGTACTTGGGAAATAAAGCAGGTTATTAGAACAAGATGCCAAGTGGGATCTATATGCTATTTAATGTATCTCCAATGTAAAACACATCAGGAAACAAAGGAAAAAAGGTCATACATTTTGTTTCTATTACTGTCTTGAAAACGGGTGTCTCTAAAACTCAATGATTAGGGTAATAAATAACTAACCAACTTTTTATTGAAAATAATGAAGGAAACAGAACACTAGTTTTCGATTTTGTTCCTTAACTGGTATGCATCTAATTTGGCTTTTTAAAAGAGTGAAAGGACAAAAGATGTTATAATTCATTAAGTGCATGCCAAAGACACTAGTTTAGATTTGGCAGAAATAATCCCCAACCGTTCTTTTCTAAACTAAATTTAGTAATGTTTGTGTAGCTGTGTTGGACGACCACAATTTATAATTTTGTGACCGTTTTGATAGAAAGGCTCAAGTTGATATTTTTGCTGTCTTGTTACTGGGCCACATGTAGCTCTTCTGGGACCAAGAATGAAGACAAGAGCTTGTTTGAAAATGAAGATAATGTGGGTGGGGATGGCAGAGCAGGTGGGCATATGCTGAGGCATTTTTTCGATGATTGGCCAAGATCAATGCAACACTCTGACAACGTTGAAAACAATGCTGCCCCTGCCCGGATAAACTCTTCCACATGTCTTTCTATTTCTATGCCCGGAAATGCTTCCTCAGATGTCTCTTTGAAATTGTCCACTGGCCCAACAAATGAGAATGTCAATCTCCAGTCGGACCAACTGCAGTTGAATTGGGCCGGAGGATGGGCCGGAGGTAGTCAAGTGGCTTCAATGGGTGGGCCACTTGCTGAGGCACTCAGATCATCTACTTCAACTTCATCTCCTACTAGCGTTTTGCATCACTTGCCTCCTGCTTCTGGATCTGAGACCAGCTTCGTTACCACCTGA