Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20987 LG5 29086841 29087419 PREDICTED: ethylene-responsive transcription factor ERF024
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G 29086849 synonymous_variant p.Ser3Ser
C/T 29086894 synonymous_variant p.Asn18Asn
A/G 29086901 missense_variant p.Thr21Ala
C/G 29086902 missense_variant p.Thr21Arg
G/A 29086906 synonymous_variant p.Gly22Gly
C/T 29086907 missense_variant p.Arg23Cys
G/A 29086908 missense_variant p.Arg23His
C/G 29086909 synonymous_variant p.Arg23Arg
A/G 29086911 missense_variant p.His24Arg
C/A 29086913 missense_variant p.Pro25Thr
C/T,A 29086922 missense_variant p.Arg28Ser
G/A 29086923 missense_variant p.Arg28His
G/A 29086928 missense_variant p.Val30Met
G/A 29086935 missense_variant p.Arg32His
C/G 29086966 missense_variant p.Ile42Met
A/T 29086988 missense_variant p.Arg50Trp
C/T 29087028 missense_variant p.Ala63Val
C/T 29087041 synonymous_variant p.Asp67Asp
G/T,A 29087050 synonymous_variant p.Ala70Ala
G/T 29087054 missense_variant p.Ala72Ser
G/A 29087075 missense_variant p.Glu79Lys
G/A,* 29087090 missense_variant p.Asp84Asn
C/T,* 29087105 missense_variant p.Leu89Phe
C/T,* 29087127 missense_variant p.Ala96Val
C/T,* 29087132 missense_variant p.Arg98Cys
C/T,* 29087141 stop_gained p.Gln101*
T/A 29087145 missense_variant p.Met102Lys
C/T 29087148 missense_variant p.Ala103Val
T/G 29087152 synonymous_variant p.Ala104Ala
G/A 29087153 missense_variant p.Ala105Thr
G/A 29087157 missense_variant p.Ser106Asn
C/T 29087160 missense_variant p.Ala107Val
G/A 29087174 missense_variant p.Gly112Arg
G/A 29087177 missense_variant p.Ala113Thr
A/G 29087200 synonymous_variant p.Glu120Glu
C/G 29087207 missense_variant p.Arg123Gly
G/T 29087210 stop_gained p.Gly124*
A/T 29087212 synonymous_variant p.Gly124Gly
G/A 29087230 synonymous_variant p.Ser130Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20987.1
MRSSNGTTCAASSTGASNGNTGRHPVYRGVRRRSSGKWVSEIREPRKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPDSASSLPVPASSAARDIQMAAASAAAAVGAANDALSEGSRGGNVSVSMAQEFPGGNLNHFVDDDLIFDMPNILVNMAEGMLLSPPRFDNFSATDYDYMDENPNLWGFPY*


CDS Sequence:
>Vu_20987.1
ATGCGTTCCAGCAACGGTACCACATGTGCTGCATCAAGCACCGGAGCCTCTAACGGTAACACAGGGCGCCACCCTGTGTACCGCGGAGTGAGGCGTAGGAGCAGTGGAAAATGGGTTTCTGAAATCCGTGAGCCCAGAAAACCTAACAGGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGCGGCTATTGCCTATGACGTGGCAGCGCTTGCTCTTAAGGGGAAGGATGCCGAACTCAACTTCCCTGATTCCGCCTCTTCTCTTCCCGTTCCTGCTTCATCCGCTGCTCGTGACATTCAGATGGCTGCTGCCAGTGCTGCAGCCGCCGTCGGAGCAGCTAATGATGCACTGAGTGAAGGAAGCCGAGGAGGGAATGTTTCGGTTTCGATGGCACAAGAGTTTCCAGGGGGAAACTTAAACCACTTCGTGGATGATGACTTGATCTTTGACATGCCGAATATTCTGGTCAACATGGCTGAAGGAATGCTACTCAGCCCTCCTCGTTTTGACAATTTTTCTGCTACAGATTATGACTACATGGATGAAAATCCTAATCTCTGGGGCTTCCCTTACTAG


Promoter Sequence:
>Vu_20987::LG5:29084841-29086841(+)
TAACACTTACTAGTAAACTTGATTTATGTTATATAGGATTTGGGATCATCCATCCACCTTGATCTGGCTCCGCAGTCTCTCATTCGCCCATGCAAGCCTCTCATTCACCCATACAAGCATAATATACAATGAGTGTTAGAAAATTCAAATACGAATGTAAGTAGAGATAAAAAAATTACTTCAATCATATTATTTTAAAGTTTTTAGATTGAGATAATTTCTATTCTTTACATAAATTTAACTCATCTTTCATTATTACTGAGTCTTTCATCGTGCCAAAGTGATTAATTTATCTTAATTACCAACTTAAATGAGTATAATATATAAAGATTCTAGTTGAGCAAATAATTTCAATAAGATTTGAAGAGGTAAGGATATAATAAAATGCTTTTGGATGTTCTCTTTGCTCCATTAATGAGTGTTTAAGAAATATATCCAAATGTTTTTATTCAAAACCATTAGTTTTGTATTTTTATTTTATAAACCCCAAAATAGAACATATAGATATTGTGAATTTGTACTATATTCCATCTAAATTAATTATCAAGACAATCATTCAACCTTAATTAAATATGAGTCTTACAAAGAATTGACAACATTTTAAACCCAAAATCTTAAAATAATAAATTATGAATTTTATTTTTTATATGGTGTTCAATATTTTATCATCTTTACACAATATAAGACTTAATCTTATACTTAAATTTTCAAATTATATATATATATTCTCAATCAATTCATTGGTAGTTGCTATGTCTCAAGTTAACTTCTGTTTGAATCTTCAACTTTCAGCGTTGAATGAATATAATGAAAGATGATAGTTGTCAAAACTAGTGATTAAACAGGAAAAATAGACAAGAGCTTAATTATTTTTTTTAAGCAGCTCATCAATTGACCAAACTACATATATAGGCAGAAGCTTAAGAATATTCATTTGCAATATCAATTAAATGATATTTTATTAAGCTACTTTTGATGAAATCTGACAATTTTATCATTTGCTATGAAACTTTGCTAAATATTATGTGTGAGAATAATATGTTACGGGCTTCAACCTGACTTATAACGAAAAAAACAATTGTGATAATAAAAGCCTTGTTGGATTTCTAACGCTGTGAATTAATAAAGTGGAGAGTATTTTCATTTCTCCTTCTTGACTGAAAGTTTCAACTTTCTGATAGGAAAGAGATAAGTGTATTAATATTTTTTATATATCAGCTACTTCCTTTAGATGTATCCCTAAAAGAAGAGATAAGTGATTTCACGAGTCTATATGATCCAGTCTGATAGCTCTTTCATGCGTCTGGAACCTTTTTAATAACCTACAAATGGCAGCATACATATAGCATAGTAAAATGGTAAAACATGTTCGGAAAACATGTGCTGAGGAAGAAATAGTTCGTAAAGCCTTCCAAATTCTCATAGCAATGCAGCAGCAGGAGGAGAAACCCTACCTAATTGGTGGGACAAAATAAACGAAGGGTAACTAAGAAAACCATAACCTCGGCTGATAAAATTTAGCCACTGAAAAATCCATGTCAGCACTCTTATATTGCGTTATAGATAATAGTAATAAGATGGAATTTTACGTTCTCTCCAACATATCAAAATCCCTGTTGAAAAAAACGAAGAATGGTGGTTAGTGATGTGCATATATATCGATTGACAGACAAAGTGCATTATCACTGTTGATAATTTTGACGTGGTTTTAAGGGGAGCTGCAAGCAGCTAATACCTTGATTTTTTGATTTTTATTTTATAATTTTGCTAAAACGCTCTCCAACTCCAACCCAGTTATCCAACATCACCAAGCTGGCTTACACCCTAATCCTTCACACACCGTAGTTCATCAACAACTGGTTTGCACTCCCATCTCAGAACTCCTTCTCCAGCCATCGCAATTCTAACCCCAATAAATGGCTCCCCTCAACTGCCAACTGCCATCATCCAAGTTCTTCCACCTTCACCTCAGATATCCCTTAGCCTTCACATCACCACCA


Gene Sequence:
>Vu_20987(+)
ATGCGTTCCAGCAACGGTACCACATGTGCTGCATCAAGCACCGGAGCCTCTAACGGTAACACAGGGCGCCACCCTGTGTACCGCGGAGTGAGGCGTAGGAGCAGTGGAAAATGGGTTTCTGAAATCCGTGAGCCCAGAAAACCTAACAGGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGCGGCTATTGCCTATGACGTGGCAGCGCTTGCTCTTAAGGGGAAGGATGCCGAACTCAACTTCCCTGATTCCGCCTCTTCTCTTCCCGTTCCTGCTTCATCCGCTGCTCGTGACATTCAGATGGCTGCTGCCAGTGCTGCAGCCGCCGTCGGAGCAGCTAATGATGCACTGAGTGAAGGAAGCCGAGGAGGGAATGTTTCGGTTTCGATGGCACAAGAGTTTCCAGGGGGAAACTTAAACCACTTCGTGGATGATGACTTGATCTTTGACATGCCGAATATTCTGGTCAACATGGCTGAAGGAATGCTACTCAGCCCTCCTCGTTTTGACAATTTTTCTGCTACAGATTATGACTACATGGATGAAAATCCTAATCTCTGGGGCTTCCCTTACTAG