Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20986 LG5 29064800 29068357 PREDICTED: trihelix transcription factor PTL isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 29064925 3_prime_UTR_variant
A/C 29064933 3_prime_UTR_variant
C/A 29065513 missense_variant p.Arg505Met
C/T 29065554 synonymous_variant p.Leu491Leu
A/G 29065827 synonymous_variant p.Ala400Ala
C/G 29065893 missense_variant p.Gln378His
C/A 29066115 synonymous_variant p.Thr304Thr
T/G 29066117 missense_variant p.Thr304Pro
A/C 29066889 intron_variant
G/T 29066914 intron_variant
G/C 29067003 intron_variant
G/T 29067020 intron_variant
T/C 29067183 intron_variant
C/A 29067193 intron_variant
C/A 29067262 intron_variant
C/T 29067574 synonymous_variant p.Glu88Glu
A/T 29067579 missense_variant p.Leu87Ile
T/A 29067586 synonymous_variant p.Leu84Leu
C/T 29067640 synonymous_variant p.Thr66Thr
G/T 29067811 missense_variant p.Phe9Leu
G/A 29068229 5_prime_UTR_variant
T/G 29068232 5_prime_UTR_variant
C/A,* 29068251 5_prime_UTR_variant
C/A 29068253 5_prime_UTR_variant
C/T 29068269 5_prime_UTR_variant
T/C 29068282 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20986.1
MNGPRSTHFPSMPPQPKAELFPGGHPNLAASQHFEMMMFGRQVADIMPRCLHDFASTDSATNNNNTSIAAATPTTTTSASTPPLSCLEGETAGCIGGDASTGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNQTSVPETNFGSGSLRFHSNSHNPSQTNQEMFHSQKHCDSLSLTNTTDLDTSSSDDNDQNSTGGLKDNDSTEKRRKRLSGRSWKVKIKDFIDSQMRKLVDKQEEWLEKLTKTLEQKEKERVLREEEWRRQEAVRLEREHKFWAKERAWIEARDAALMEALQKLTGNEMIKSTQSPEGVMVTGIQNHSENLNEDGSEILNSTTARGAESWPESEITRLQQLRAEMETRYIQSGCSEEFMWEEIATKMACFGYERSALVFKEKWESTSNYARNAKDGNKKRKEDSRGCFYFDNSEQSSLYNQGGAYCDINDQRHERRLQNDGSSPSNSNVGNAVAGDHCFPFLMTESANLWENYSLKVSKASQNQ*


CDS Sequence:
>Vu_20986.1
ATGAACGGCCCGAGGTCCACCCATTTCCCCTCCATGCCGCCGCAGCCCAAGGCGGAGCTGTTCCCCGGCGGCCACCCCAACCTGGCCGCCTCGCAGCACTTCGAGATGATGATGTTTGGTCGTCAAGTGGCCGACATAATGCCTCGGTGTCTTCATGACTTTGCATCTACCGATTCCGCCACGAATAATAACAACACGAGCATCGCTGCTGCCACTCCCACCACCACCACTAGTGCCTCCACTCCTCCGCTAAGTTGCTTAGAGGGTGAGACCGCAGGATGCATCGGTGGAGATGCCTCCACTGGAAGATGGCCCAGACAAGAGACACTCACTCTTCTTGAGATCAGATCTCGCCTCGACTCTAAATTCAAAGAGGCTAATCAAAAGGGTCCCCTATGGGATGAAGTTTCTAGGATCATGTCTGAAGAACATGGATATCAAAGGAGCGGGAAGAAGTGCCGGGAGAAGTTTGAGAACCTCTACAAATATTACAAGAAGACAAAGGAGGGAAAAGCTGGAAGACAGGATGGGAAACATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGTGAAAACAGTAACCAAACCTCGGTACCAGAAACCAATTTTGGTAGTGGCAGCCTTCGTTTCCACTCAAACAGCCACAACCCTTCTCAAACAAATCAAGAAATGTTTCACTCCCAGAAGCATTGCGATAGCCTAAGTCTCACCAACACCACTGATTTGGACACGTCATCATCGGATGACAACGATCAGAATAGCACTGGGGGACTCAAGGACAACGACTCCACGGAGAAGAGGAGAAAGAGGTTGAGCGGAAGAAGCTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAGGAAGCTGGTGGACAAGCAAGAGGAGTGGTTGGAAAAACTCACGAAGACACTGGAACAGAAAGAAAAGGAGAGGGTGCTAAGAGAAGAAGAGTGGAGGAGACAAGAAGCTGTAAGGTTGGAGAGGGAACACAAATTTTGGGCTAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTTTAATGGAGGCTTTACAAAAACTAACAGGAAATGAGATGATAAAGAGTACTCAATCTCCTGAGGGTGTAATGGTAACTGGAATTCAGAACCACAGTGAAAACCTGAATGAAGATGGGAGTGAAATACTAAATAGTACCACTGCCAGAGGTGCTGAAAGCTGGCCAGAATCTGAGATTACTAGGCTTCAGCAGTTGAGAGCTGAGATGGAGACAAGGTATATACAAAGTGGGTGTTCAGAAGAGTTTATGTGGGAGGAAATAGCAACCAAAATGGCTTGTTTTGGTTACGAAAGGAGTGCTTTAGTGTTCAAAGAGAAATGGGAAAGTACCAGCAACTACGCAAGGAATGCTAAAGATGGAAACAAGAAGCGCAAGGAAGACTCTAGAGGTTGTTTCTACTTCGATAACAGCGAACAGTCTTCCCTGTATAACCAAGGAGGAGCCTATTGTGATATTAATGATCAAAGGCACGAGAGGAGGCTGCAAAATGATGGTTCTTCGCCTTCAAATTCAAATGTTGGAAATGCAGTTGCTGGTGATCACTGCTTTCCCTTCTTGATGACTGAGAGTGCAAATTTGTGGGAGAACTATAGCTTAAAGGTTAGTAAAGCAAGTCAAAACCAGTGA


Promoter Sequence:
>Vu_20986::LG5:29068357-29070357(-)
TAGTCAATCTTGACTAGTTCGAGTTTAACCATTCTTGGTATACAATTCTCAAATCCTTTTGCTTATAGACAGTTGTCTAGAACATTTGACTCAACCGAGCTAAACAATATAAGTATTTTAATTCATTTTTGAATATCCAAGCATAATCAATGTTTGATTACAAGTGCAAATTTGAGTAACTCTGAGAGAGAGGATAAATACAATACAACACAATCTTGTGACTTGATAGAATTTCTTTTGTTCCAAGAACAGACTTAGACAATGTAAGCTTTCAGAGATAATAACATCGTAATGATACAATGTTAGAAAAAAGTTCTTCTATTCTGTTGTGAGTCCTCCTTTTATAGATTTCTTCGAGAGATGATTGTTACTCGGAGAGAGTTAACCTTTTTTAGAGTAAGTGGCTTCCCATATGAAGATATGTACTTTTCTACGCCTTGGGAAGTCATAACGCTTTAGGAAACATTTCAGGAATGTCTTCCTATTTCACAACGTCTTTGTAATTCAAGTGTAGTGCTTTTGAGTAAATCTTGGTATTGTCAATATCTACAAAGATAAAGAGAGAAAAAGTAAAGCAAACAGAGTGTTGTACGTTCATGCATTTAATGTTTTATACTTTGATAAACTATTGAGGCATGATTTATAATATAAGCTTTTAGCGTCTAAGATATTTCAAAGTAGTTTATAATATATATATATATATATATATATATATATATATATATATATATATATTCTGCACAAAACATTCCTTCAATTTTTTCTCAAAGTTAGCTTAGGTTATTCTTTCAACTTAGTTAAGATTCTTCCTTGTCCATGCTCCAAACCGTCTGGGTGTACCTGTCAAAGACACTTTGACGCTGAAGTTATTAAATCAATCCGATCGAATCACAATAAATTCTTAAATTCGTAATAAATATAATCATCTATCTTTTTATCTTTGACCTCTATTTACCCTAAACCCTCCTAATCACAACCCAATTATAGTCCAATTTCCAATAAATAACTCTTTCAAGTAATCTTGATTAGGGGCAATGTTTAGGGGTTTTTATTGCTAGAGACCATTCAACCTTTCGATCTCCCATTTCCATGATCGTGCGGTCAACTAATAAATCGTTTATTAACGATCTTAATTGAATGATACGTGATGATATTGACCATAAAATGTTTGGACTGGGTATCCCTTCTCGTGGTCTTATACGACTGGCTACTCTATATGTTCGTATAGCCATACACTACACAAATGTTTGTTTTCTTGTAAATGATATTATAACATTCAAGTTAGTAAGTGAATAGTATAATATAATTGTAATGTAAATTTATGAGACCGAATATGAATTGAATTGAGTCTCTTCATACAAGTATTCTTATTATAATATTAAGTTGTAAAATATAGATGTAATGAGATATCACAATATATCATAAAAAAAACAAAATTATTAAGTATTATCTTTAAATAGTAATAAACCGATAACTTATTGAGATCATATCTTATTAAGCAATTTTATGTTAATCTCTTATGCTACCGGTTTATCTCTAATATAAAAATACTATAAGAACTACATTTTTTTGTAACTTTTATTTGTATATCAAATTTATACTACTTAAATATTTCTCAAAGTCAAGTCTAAAATCTAAGACTTCTTTTGCTATACGACATAGCATAATGCAATAAAATTTAGAAAAATTTATGGATTTTATCCTTAACACTACAAATGACATAAGATATAATTATTTAACAAAAAAGAGAAGGGAACACGTTAATGTTGTTGTATGGAATCATTACCAAAAGTCAAAAAGGTAGCATCGAAGACACTATACACGCGTCAGCAAGACAAACTCGGCTGTCTTCCATTCGTCGTTTCACTTTAGACCACGTGTCGTGCATTCATTAGGCAATCAAACATCATCATAATAACAATAAAAGAATATAATAATAATAAATATGAATAAGAAGAATACAAGGTATACATTAACATTAACATTGTTTTTGTATGGTT


Gene Sequence:
>Vu_20986(-)
GATGGGTTTAGGGCTTACTCCCAGAAACACTCCAACCCCACCCTTCTCACTGTACTGAAGAAGGACACAGAAGGAAGCAGCATAAAGCGATGGAGAGAGAGAGAGAGATAACACATTACCTCACCACACTAATACTATTGCTATTACTAACATTAAACAGAGAAAGAGAGAGAGAATTTCATTTCATTTCATTTCAATCTGAATAATAAGTGAATATCTCTCGTAGTGTCGTACACCATACACCACACGCATACATTTGTACACAGACATGGGACCATTTCCCTGCGTTTAAATTTTGATCTTTTTCGTGGACGACAGGATCCGACTCTGCCGCTTAACTCTCTTCCCTCTCTATATCATCCTTTCTCCTTCACCTTTTATCTCTCTCAATCTTTTTCTTCTTTCTTTCTAACCTTCTCATATGGAAATGGAGGACCATCATCATCATCATCATCAACACCATGAACAGCAGCAGCAGCAGCAGCAGCAGCAGTATGCCATCACTGATCTCAGACAACTCATGAACGGCCCGAGGTCCACCCATTTCCCCTCCATGCCGCCGCAGCCCAAGGCGGAGCTGTTCCCCGGCGGCCACCCCAACCTGGCCGCCTCGCAGCACTTCGAGATGATGATGTTTGGTCGTCAAGTGGCCGACATAATGCCTCGGTGTCTTCATGACTTTGCATCTACCGATTCCGCCACGAATAATAACAACACGAGCATCGCTGCTGCCACTCCCACCACCACCACTAGTGCCTCCACTCCTCCGCTAAGTTGCTTAGAGGGTGAGACCGCAGGATGCATCGGTGGAGATGCCTCCACTGGAAGATGGCCCAGACAAGAGACACTCACTCTTCTTGAGATCAGATCTCGCCTCGACTCTAAATTCAAAGAGGCTAATCAAAAGGGTCCCCTATGGGATGAAGTTTCTAGGTAGGTACCATTTTTATTTTCTTCTGTTTCAAAACAGTACTCCCTCGCTTCTCTTTTCAACCTTTTTTTTTCCTCAACTTGAACATCTCAAAATCATAATTCTTTGTTTGTTTGTTTCTTTGGGATTGAAAATTAAAATAATGAAAACAAATAAAAGCAGTGGACAAAATATCTGTGTAACTACTTGACGGTTTCCTATTAACATGACTGCACTTAATCGGTTTTAATTGGGTTACTAGTGATGACACTACTTTCTGGAAACTCTCAGAGAAATATAATATGCCACTAATTGTTTGAGGTGACCATACTATATACAACTCAATTTTCGATTATTGATCGTGTACTTCGAAGTTCTTTGAGTTCATATACCAAGATTAGTACGTCTCTACCACTGTCCCTTTTCCCTTTTAGAAATTTCCTACCCTCTTTTAAGTGCAAGTCATAGCCTACCGTTTAATACTAGTTTTTCCCTACGCAAAATTCATTCAACTTTCAGAAGCTTTTGGAGCTCCCTATTTTAATTCTAGCTCTTATCTCGTGGGATGACATCAACCGCAGGCTCTTCGTTCAATGAATCATATTTCTATACCCATTCCAATGCTCGTTTGCTAAAACTAGGTTGCTATAATATCATAGCGAACGTCACTGCATGACCTTCGTTAGCTTTTTATTGTTATTATTATTATTATTATTATTATTATTATTATTATCATGAACGCTCACATCATTCCCAGCTCAGACTAGGGTTCCATGTTCCATCACCTACATTGAGCTCAGTTTGGCCTTTTTGTTTCTTGTGTTAATGTTGAAGGATCATGTCTGAAGAACATGGATATCAAAGGAGCGGGAAGAAGTGCCGGGAGAAGTTTGAGAACCTCTACAAATATTACAAGAAGACAAAGGAGGGAAAAGCTGGAAGACAGGATGGGAAACATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGTGAAAACAGTAACCAAACCTCGGTACCAGAAACCAATTTTGGTAGTGGCAGCCTTCGTTTCCACTCAAACAGCCACAACCCTTCTCAAACAAATCAAGAAATGTTTCACTCCCAGAAGCATTGCGATAGCCTAAGTCTCACCAACACCACTGATTTGGACACGTCATCATCGGATGACAACGATCAGAATAGCACTGGGGGACTCAAGGACAACGACTCCACGGAGAAGAGGAGAAAGAGGTTGAGCGGAAGAAGCTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAGGAAGCTGGTGGACAAGCAAGAGGAGTGGTTGGAAAAACTCACGAAGACACTGGAACAGAAAGAAAAGGAGAGGGTGCTAAGAGAAGAAGAGTGGAGGAGACAAGAAGCTGTAAGGTTGGAGAGGGAACACAAATTTTGGGCTAAAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTTTAATGGAGGCTTTACAAAAACTAACAGGAAATGAGATGATAAAGAGTACTCAATCTCCTGAGGGTGTAATGGTAACTGGAATTCAGAACCACAGTGAAAACCTGAATGAAGATGGGAGTGAAATACTAAATAGTACCACTGCCAGAGGTGCTGAAAGCTGGCCAGAATCTGAGATTACTAGGCTTCAGCAGTTGAGAGCTGAGATGGAGACAAGGTATATACAAAGTGGGTGTTCAGAAGAGTTTATGTGGGAGGAAATAGCAACCAAAATGGCTTGTTTTGGTTACGAAAGGAGTGCTTTAGTGTTCAAAGAGAAATGGGAAAGTACCAGCAACTACGCAAGGAATGCTAAAGATGGAAACAAGAAGCGCAAGGAAGACTCTAGAGGTTGTTTCTACTTCGATAACAGCGAACAGTCTTCCCTGTATAACCAAGGAGGAGCCTATTGTGATATTAATGATCAAAGGCACGAGAGGAGGCTGCAAAATGATGGTTCTTCGCCTTCAAATTCAAATGTTGGAAATGCAGTTGCTGGTGATCACTGCTTTCCCTTCTTGATGACTGAGAGTGCAAATTTGTGGGAGAACTATAGCTTAAAGGTTAGTAAAGCAAGTCAAAACCAGTGATGAGATGGAAATAAGGTTGACACTTATAAGAGGCACGAAAATTTCATAGCCATTTATCTGAGAGACGATCTCCCGTTATGTATAGGGCACCGATGATGATAAAGTGGTCAATCTTATTATATTTATGGGAATCAAGGTGAAAAATAATGTGTTCGAATCACGTACTTAAGTTTAATGAGGGAGACTAGACAATGACAAATATCACTGAATTATTGGGGTATGAATTTGACACTAGTTCAGGTGAGTTTCTCTAGAAGCAGGTTTCTTTTATGCGTGCAAATGGAGTTTGCAATTGTATTACTTCATATGTTGCATCTTCCAATGATGTTTATATCATCACTTGGTCACCCTCTTTCTCTCCTCCTACACCCATCTTGCCTTTTTTTTAGTAATTTTTGGATATTTTATCTGTGCGGGCCTTTTCTGTCTGTGTACTGAAGACTGTAATTAAATTTCTTTGGTTTTATTTATTAGTCAATATTTTTATGAAGGAGGTGAAAGTGATGTATTGATGGATATTGTTTAAGCATGGAATATTAATTGTTTCAAGCAT