Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20957 LG5 28692892 28693858 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 28692918 missense_variant p.Ser177Gly
T/A 28692932 missense_variant p.Asp172Val
A/G 28692955 synonymous_variant p.Phe164Phe
A/G 28692966 missense_variant p.Phe161Leu
C/T 28693018 synonymous_variant p.Leu143Leu
T/A 28693072 synonymous_variant p.Gly125Gly
G/T 28693195 intron_variant
T/C 28693203 intron_variant
T/C 28693228 intron_variant
G/A 28693240 intron_variant
G/A 28693338 intron_variant
T/C 28693528 intron_variant
A/G 28693540 splice_region_variant&intron_variant
A/G 28693599 missense_variant p.Val87Ala
A/G 28693604 synonymous_variant p.Tyr85Tyr
C/T 28693688 synonymous_variant p.Glu57Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20957.1
MKQATLLETGEGSIPAMYNGSKEKKKRLTSNQLELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWKTKQLEHLYDVLKHQYDVISNEKQKLQEEVMKLKALLSKEQGFGKQRLGGYPEISGVETVESTSEGLRGSNKGKSNIDQVADEGFCSFSVEDYNTDSVPFSQWPVVPY*


CDS Sequence:
>Vu_20957.1
ATGAAACAGGCGACATTGTTGGAGACAGGAGAAGGTTCTATTCCGGCAATGTACAATGGAAGCAAAGAGAAGAAGAAGCGGTTAACAAGCAACCAGTTAGAGTTATTGGAGAGGAGCTTCCAGGAGGAAATAAAGTTAGACCCTGAAAGGAAGATGAAACTTTCGAGGGAGCTAGGCCTTCAGCCTCGTCAAATCGCTGTTTGGTTCCAAAATAGACGTACGAGGTGGAAAACCAAGCAGCTTGAGCACTTATATGATGTTCTCAAGCACCAATATGATGTCATCTCCAACGAAAAGCAGAAGCTTCAAGAAGAGGTTATGAAGTTAAAGGCACTGCTAAGTAAAGAGCAAGGTTTTGGGAAGCAAAGATTGGGAGGTTATCCAGAAATATCTGGAGTAGAAACGGTAGAAAGCACTTCAGAGGGTCTGAGGGGTTCCAACAAGGGAAAGAGTAACATTGATCAGGTCGCAGATGAGGGCTTTTGCTCTTTTAGCGTGGAAGATTATAACACTGATTCAGTGCCTTTCAGCCAGTGGCCTGTTGTGCCTTATTAG


Promoter Sequence:
>Vu_20957::LG5:28693858-28695858(-)
TGTTAATAAGGTTATTATGAAAGTGAGTTTGACAAAGAGTCTCAATAATTTAAGAAATATTTAAATAATTAGTACATTGAAGAGGAAAAATGACTCAATAAAATAGTGTCGCCTAAATATGTATTAAATGCTTTTTGGTGTCGTCTAATATATGCATAATGCTTTTTCAATTGTAATGACAGATATTTAGAATTAATCAGAAATTGAATTTTAGAAGTAAGTAACAAAAGAAATCCTAACTCTTAATTTATTTTTAATTATAAATTAACTCTTAATTTGTTTATAAGTATAATTAAGACATCCACGTATAAACTTTTTCTTTACGATCATAGTACATTTAGACATTTGTAAACCTTAAAAAATTATTTTGGATCACGATATGTTAACAACTTTTTGACAATAGATTATATATCACTGTCTTATTGGTCTGTATATTTGAAATGGACTAATCACGAATTACCCGTAAGCATTGTAAAAAAGTTGTCAAAAAAAAGTTGTTAAAAAAACTTTTTCCAATTACTTTTACCATGTTAACGTATACTCTTTTGTCACATCACGAAACAGTTAATTCCGATTATATATATTTAACAGAAGAGATTTAATTAAAAGAAATTTAACGAAATTGAAACATTTATGAACAACTTAGACACGTTACAAGCCAAACTAGAGATTTAAGAAAACAATTAAACCAAATTTATTATCAAACATATCATAGATGACCTTGTGGAGAAGAAAAGAAAGAATTAAATTATCTTGAAAACTCAACCTGTCCTTACAAACACAAACAAACTCAATATACGGATCTTGAGTAATCACGTGCTTTCATAATAAATTTTAGTAATATTATTTGGACTAATATATTACATCACATGATTTATGTTATCAGATTCAAACTTACAAGAGTTATTGTAAAAGAAACGGTATAAGAGGGATATTTTTTTGAAACGGGAATCATGAAGGCTACTCAGTGGCCAACTCAACACACGGTTCCCCTTTTCACACCTTTTTAACCTTCCTTGGGTGCGCGTACCACTCTCTATAGCCCCGGATAGCTACAACTCTGTATTATCTCTGCAACTCTCTTAAAGTTAATTAACTTTGATTTAGAAGGAGTAAGTGATGAAATAAATGCTCTGGATGTTATTTTCATAATGAAATTTATTAGCTAGAAGCATTGAAAAATTAAAGATTAATTAGCTGGCACCAAAAATGTGAAAGGAATAAACAGCCTTTTGCCTCTCATAATAACAAGTCAGAACGATCGTGCAACACCTCACTGCCTTAGCTAAACTTGCTACACACATTTTTCTATCGGCCTACGTGGTCCAAGTCAATCCTCAAATATATAAGAGATCGTTTGGCAGATGGAATTCTATGGAAAGAAAGATCTAGCCCTAAAGCTGTAAAAAGATATGGATTGGCATTACACCACAAAACCATTTCTTCCTCACCCAGACACCTTAAGCTTCTTCTACAACTACAACAACAACCCTTATCCAGGTTAAACATCAACAAAATCTCAACTTGCATTTCTTTCTACTTCCTTTGCTTTACGATTTTCAGATGCAGTTAGCTTCTATATATGCGTGTGACTCAATTAATAGCTTCCAAGAATCAGCCTATATTTTGCAACCACCCCATTTCAATATTTCTCAGTTTTGTATTAGTAACTTGAATCCCAAGTAATTGTCCCATTTTCTTGCTTTTCTGAAGATACCTAGCATAGGAAACATTGGCAAAAGCATGTTCAGCTAAGACAACCTCCAGAAGATCAATCCTACAGCCTAAATGTTTATGTTTTATATTTTAAAAGATAGAATATTTATGTTTTTTTATCATAAAACAGGTTATAACCCTAGCTAAAATGCTTTTGTTGATCATGTATTAGAGGCAGGACTTTGTGATACTAAGAAGTGTAAATAGTTATTACCACCAGATCTTCAAACACCTTGCTGCTTTTCCAACGTAACCCTTTGTGTAGCATATTTTCAGGAGTGGAA


Gene Sequence:
>Vu_20957(-)
ATGAAACAGGCGACATTGTTGGAGACAGGAGAAGGTTCTATTCCGGCAATGTACAATGGAAGCAAAGAGAAGAAGAAGCGGTTAACAAGCAACCAGTTAGAGTTATTGGAGAGGAGCTTCCAGGAGGAAATAAAGTTAGACCCTGAAAGGAAGATGAAACTTTCGAGGGAGCTAGGCCTTCAGCCTCGTCAAATCGCTGTTTGGTTCCAAAATAGACGTACGAGGTGGAAAACCAAGCAGCTTGAGCACTTATATGATGTTCTCAAGCACCAATATGATGTCATCTCCAACGAAAAGCAGAAGCTTCAAGAAGAGGTATCTTCCAACTTCACTTTCACACACTCCCACACGCATTATAAATGTTTAGTTGCTTTTACACGTATCATGGTGTCTCTACCTGCAAATATTATACATTCAAACATATCTCTTTTCATTTCAAGTTTGAATACAGTGGCTATCTATCTCCTGCCTTGGTCACGCCAAAAAAATAATGACACGATTTTTATCTCTAAGATTAGGGCTTGTGTCATGAAAGACACCCGGGGTGATAGAAATATGAAACTGTATATGTTATATGTTAACTGCATTACTATTTTACGTCATGCAATGTTTTTCAGACAAAAGAAGTGTATCTTGTTCAGCAAAAGTATCAAAAAATGCGTGCAAATAACATGACATAATGGTCTGCTTTTGCCTGTGAACATGAATATGCATTTGGTTGGTTCAGGTTATGAAGTTAAAGGCACTGCTAAGTAAAGAGCAAGGTTTTGGGAAGCAAAGATTGGGAGGTTATCCAGAAATATCTGGAGTAGAAACGGTAGAAAGCACTTCAGAGGGTCTGAGGGGTTCCAACAAGGGAAAGAGTAACATTGATCAGGTCGCAGATGAGGGCTTTTGCTCTTTTAGCGTGGAAGATTATAACACTGATTCAGTGCCTTTCAGCCAGTGGCCTGTTGTGCCTTATTAG