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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20733 LG5 26307449 26310731 MDIS1-interacting receptor like kinase 1
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, procambium histogenesis, pollen tube guidance, pollen tube guidance, phloem or xylem histogenesis, protein autophosphorylation, pollen tube guidance, protein autophosphorylation, procambium histogenesis, procambium histogenesis, pollen tube guidance, protein phosphorylation, protein phosphorylation, procambium histogenesis, protein phosphorylation, procambium histogenesis, phloem or xylem histogenesis, pollen tube guidance
Cellular Component   located in   plasma membrane, pollen tube
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein kinase activity, protein binding, protein binding, protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_20733.1
MKKIKNQMKIQLFIFFCYIGCSSYGFSAAVNDEVSTLLSMKAGLIDPLNTLRDWKLHDKAPLKDAFHCSWTGIKCNSAGAVEELDLSHKNLSGTVSDVIQRLKSLTSLNLCCNAFSSPLPKSLANLTTLNKLDVSQNSFNGDFPLGLGRAWRLMTLNASSNEFSGSLPEDLGNASSLEMLDLRGSFFEGSVPKSFSNLHKLKFLGLSGNNLTGKIPGELGQLSSLEYMILGYNEFEGVIPEEFGNLTNLKYLDLAVANLGGEIPSVLGKLKLLNTVFFYNNNFDDRIPAAIGNMTSLQLLDLSDNMLSGKIPAEISQLKNLKLLNLMGNQLSGPVPSGFGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSFSGEIPETLCSQGNLTKLILFNNAFSGPIPSSLSTCFSLVRVRIHNNFLSGTIPVGLGKLGKLQRLELANNSLSGGIPDDIASSTSLSFIDLSRNKLHSSLPSSVLSIPNLQAFIVSNNNLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPASIASCQKLVNLNLQNNQLTGEIPKSLAKMPSLAMVDLSNNSLTGQIPESFGISPALEALNVSYNKLEGPVPANGILRTVNPNDLVGNVGLCGGVLPPCDQNSAYSSRKRSLRTKHMITAWITGISSILVIGIAIVVARSLYIRWYTDGFCFRERFYKGSKGWPWRLMAFQRLGFTSTEILACIKETNVIGMGATGIVYKAEVPQSNTVVAVKKLWRTGTDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLHNDIDVMIVYEFMHNGNLGEALHGRQATRLLVDWVSRRMKQSPWLLDLMVILPLVDEKIDVYSYGVVLLELLTGKRPLDSDFGESIDIVEWIRMKIRDNKSLEEALDPSVGNSRHVVEEMLLVLRIAILCTAKLPKDRPTMRDVIMMLGEAKPRRKSGGNDAANNKESPVFSTSPVNGLM*


CDS Sequence:
>Vu_20733.1
ATGAAGAAGATCAAGAACCAAATGAAAATCCAGCTTTTCATCTTCTTTTGCTACATTGGTTGTTCCTCCTATGGTTTTTCTGCTGCTGTAAATGATGAAGTATCGACTTTGCTTTCCATGAAAGCAGGTCTCATTGATCCATTGAACACTCTTCGGGATTGGAAACTGCATGACAAAGCACCGCTAAAGGATGCATTTCATTGTAGCTGGACTGGCATCAAATGCAACTCAGCTGGAGCCGTAGAGGAGCTTGATCTGTCCCACAAGAATCTCAGTGGTACAGTATCCGATGTTATACAGAGACTTAAAAGTCTTACCTCTCTCAACTTGTGTTGCAATGCTTTTTCATCACCATTGCCAAAATCCTTAGCCAATCTCACCACACTTAACAAACTTGATGTGAGCCAAAATTCCTTCAATGGTGACTTTCCATTAGGCCTTGGAAGAGCATGGAGACTCATGACCTTAAATGCATCCAGCAATGAATTCTCAGGTTCTCTTCCTGAGGATCTTGGAAATGCCTCTTCCTTAGAGATGCTTGATCTCAGAGGCAGTTTTTTTGAAGGGTCAGTTCCAAAATCGTTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCAGGGAACAATCTCACCGGTAAAATTCCTGGAGAGCTGGGACAACTTTCATCACTGGAGTATATGATCCTTGGATATAATGAATTTGAAGGCGTCATTCCAGAAGAGTTTGGCAACCTCACCAATCTTAAGTATCTTGATTTAGCAGTGGCCAATCTTGGTGGTGAGATTCCAAGTGTATTGGGAAAGCTCAAGTTATTGAATACGGTTTTCTTTTACAACAACAATTTTGATGATAGAATTCCAGCAGCAATTGGCAATATGACTTCTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGAAAAATTCCAGCTGAAATAAGTCAGCTGAAGAATTTAAAACTTCTGAACTTGATGGGCAACCAGTTGTCTGGTCCTGTGCCTTCTGGCTTTGGAGATTTGCCACAACTGGAGGTACTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAAAATTCACCATTGCAATGGTTAGATGTGTCATCCAATTCATTCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGCAATCTCACCAAGCTTATACTATTCAACAATGCTTTCTCTGGTCCAATTCCATCAAGCCTATCAACGTGCTTTTCACTTGTACGTGTTCGAATTCACAACAATTTTCTTTCAGGGACAATTCCTGTGGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTTTCTGGTGGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCCTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCCTCCTCCGTCCTTTCCATTCCAAACCTGCAAGCTTTCATTGTCTCCAACAACAACTTGGAAGGAGAAATCCCAGACCAATTCCAGGACTGTCCATCACTTGCAGTTCTTGATCTCTCATCAAATCATCTATCTGGAAGCATTCCAGCAAGCATTGCTTCTTGTCAGAAGTTAGTAAATTTGAACCTCCAAAACAACCAATTGACTGGTGAAATCCCAAAATCATTAGCTAAGATGCCTTCATTGGCCATGGTTGACCTTTCCAACAATTCTCTGACAGGCCAAATACCTGAAAGCTTTGGAATTTCTCCAGCTCTTGAAGCACTCAATGTCTCATACAATAAGCTGGAAGGCCCAGTCCCAGCGAACGGAATACTAAGAACTGTAAACCCAAATGACCTTGTCGGCAATGTTGGCCTATGTGGTGGTGTCCTCCCTCCATGTGACCAAAACTCTGCATACTCATCAAGGAAACGAAGCTTGCGCACAAAGCATATGATTACAGCATGGATCACTGGAATATCATCAATCCTAGTTATTGGGATAGCGATTGTGGTTGCTAGATCTTTGTACATAAGATGGTACACTGATGGGTTTTGCTTCCGAGAAAGATTTTACAAGGGTAGCAAAGGATGGCCCTGGAGATTGATGGCATTTCAGAGGCTTGGTTTTACTAGTACTGAGATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGCATGGGAGCCACTGGGATTGTTTATAAGGCTGAGGTACCGCAATCAAACACAGTTGTGGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTTGGAAGTAGTGACGACCTTGTGGGGGAGGTGAATCTTTTGGGGAGACTAAGGCATAGAAACATTGTTAGACTATTAGGATTTCTTCATAATGACATTGATGTGATGATAGTTTATGAATTCATGCACAATGGCAACCTAGGAGAAGCCTTGCACGGTAGACAAGCAACAAGATTGCTTGTAGACTGGGTTTCACGAAGAATGAAACAGTCTCCATGGTTGCTGGATCTTATGGTTATATTGCCCCTGGTAGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTCACAGGAAAGAGGCCTTTAGATTCAGACTTTGGAGAGTCAATAGACATTGTAGAGTGGATTAGAATGAAGATTAGAGACAACAAATCACTGGAAGAAGCATTAGACCCCAGTGTAGGAAATAGCAGGCATGTTGTAGAAGAGATGCTTTTAGTTCTAAGAATAGCGATTCTGTGCACTGCCAAGCTCCCCAAGGACAGACCAACCATGAGGGATGTCATTATGATGCTTGGAGAGGCTAAGCCTCGAAGAAAGAGCGGTGGCAATGATGCAGCTAACAACAAAGAGTCACCAGTTTTTAGCACATCACCAGTTAATGGCCTAATGTAG


Promoter Sequence:
>Vu_20733::LG5:26310731-26312731(-)
TAATCTCTCTCCATTTTCCACCATAGAAATGTTAGATGCAATAACCATCAGACCAATTCAACAGAACAACCATCATAAACAGTGTTTTAGTTAAAAATGTTTGAAGTTCTCATCTGTCTCTCTCCAATAATAAGGAACGATGTACTTCACTAGGAAGCTGCTGTTTCACATGACTTCCATCTGTCTCAGCATCAGATGTGATCTAAGCAATAGGAAGAGCAGAAACATTGTCACTAAATTAATTTCTTGTTATAGCAGTCCACACCATGTGTGCATGTGAATATTGAAAGAGAGAAAGGAAAAGAAGAAATATATATTTTATATCAGAAGTGGCAGTTGGTAGGCTCAGACCATGATTGATCAACAGTTGCACTTTTCTCCCATTTTCTTCTGTTTGCAAATTCTCCTCTTTGTTTATTCTTCATTATTATGATCAACATCTTCCTATCTTCATCTAACACTTGTTCATTTCTTCATCTAAAAAATCAAATAAACAAACCTACCCTAAAGTCTAGAGAAAACAAGGACCATTAATTCCCGGATGCAATTCAGGATTTATTCTGGTGCATATGCATAGCCTTCTACTGTTTCACCAATGGTCAATTGAGTGTACAAGCTATGCACTGGTTTAAAAATACCCTGCACTATTCTTGTGGCCCATTTTTTTTAATTTTTTTTAAGTTAATGGGTGGTAGAACTTGTCTTATTTTCAAGTTCCTTTCACCTTATAACATGGAAAGATTCCCTCATCAAAATCATAATGAATAATTAACATTGATGAGCCTAAAACCATCAAGTGCATGATGGGTGGTGTTTCAGATCTTTATTTTATTTTTATTTTCATCTTCTCCCTTTCCCACCCGTGTGTCTTTTTTTCTTTCTAGCCCTTACTAGTGGACTTAAAATATATACAGGGACATGATTTTTCTCTCTGTTAAAAGCTATTCTCATCATCACATGACTGGTTTGGAATTTGATGTTAAGATAATCACAAGTACATCAATGTTCTTTGGTGGATCCTACAATAACCATATGTTAGTTGGCCCACTAATGCATCATTTCTGAATCTTTGTCATACTTAGAAGTTACCCTTCAATCAGCTCGAACTTGAAAGTGCATTTTCACACTCATAGTATGAAACACACTTAAAGCGGCTTAACAAAAAAGTCGTATTTAATGTACTGAGAAAGATGCTTTAGACAATGCTTATTGTCTCAAAATAAAGTTCCCTTTAACACTTTAACAGTGTAGTACTGTGTTAATGTGGTTGTCATATTCTTGTATATTTTTACCTCACTTTTTCTCGTTTCCCGCATCTGGTTGATCTCAAATATAGATTGTGGAACTGATGTCTATATTTGTGAAGCTATGAGATCTAGTGTTCGGATAGTTTAATTTGAAAAGTAACTCTGACATGGGGTCAGTAATTATTATGATTACATTTATTAACATTAACTGCCAGAAAAGAAATATAAAATCTCAAGGCCATTGTGGATCAGTATTCTGATCTATTATGGGAGAAGATTTTAAATTCTCACATTCCTTCGCTCACAATCTTGTTAGCAAGAATTTGATTACTGTAAAAGAAATTCTTAATAAACAAACAAGAGATAAACATTTTTGAATAAAAAAATTAACTGCATTATCCCTCTTGAAATTGACAAGGATAAGCAAAAGAGGAAGAAGTAGAAACTTAAACAGCATTAAGAGCCATATTCTCCCATGTTTTATGTCGGATAAACTTCTAATAGATCCAAAGCTTCACCTGTCTTTACATGCACTGTCGCACACTGCTAGCTTCTTTGAAATACCACTTCATAAACCTGACTAGTTCTTAAACCGAAACTACTGTTCTAGTTTATTTATTGGTCATATAATATACAGAATCACATGCATATGCTGTTCTTCTTTCAACCACTTCTCACAAACTGCACATATTACTCTCTGCCTCGTTTCACAAGAATGCAAATGATGGACAAGTGAGCCATTAATCAAACAGC


Gene Sequence:
>Vu_20733(-)
ATGAAGAAGATCAAGAACCAAATGAAAATCCAGCTTTTCATCTTCTTTTGCTACATTGGTTGTTCCTCCTATGGTTTTTCTGCTGCTGTAAATGATGAAGTATCGACTTTGCTTTCCATGAAAGCAGGTCTCATTGATCCATTGAACACTCTTCGGGATTGGAAACTGCATGACAAAGCACCGCTAAAGGATGCATTTCATTGTAGCTGGACTGGCATCAAATGCAACTCAGCTGGAGCCGTAGAGGAGCTTGATCTGTCCCACAAGAATCTCAGTGGTACAGTATCCGATGTTATACAGAGACTTAAAAGTCTTACCTCTCTCAACTTGTGTTGCAATGCTTTTTCATCACCATTGCCAAAATCCTTAGCCAATCTCACCACACTTAACAAACTTGATGTGAGCCAAAATTCCTTCAATGGTGACTTTCCATTAGGCCTTGGAAGAGCATGGAGACTCATGACCTTAAATGCATCCAGCAATGAATTCTCAGGTTCTCTTCCTGAGGATCTTGGAAATGCCTCTTCCTTAGAGATGCTTGATCTCAGAGGCAGTTTTTTTGAAGGGTCAGTTCCAAAATCGTTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCAGGGAACAATCTCACCGGTAAAATTCCTGGAGAGCTGGGACAACTTTCATCACTGGAGTATATGATCCTTGGATATAATGAATTTGAAGGCGTCATTCCAGAAGAGTTTGGCAACCTCACCAATCTTAAGTATCTTGATTTAGCAGTGGCCAATCTTGGTGGTGAGATTCCAAGTGTATTGGGAAAGCTCAAGTTATTGAATACGGTTTTCTTTTACAACAACAATTTTGATGATAGAATTCCAGCAGCAATTGGCAATATGACTTCTTTGCAGTTGCTGGATCTTTCTGATAACATGTTGTCAGGAAAAATTCCAGCTGAAATAAGTCAGCTGAAGAATTTAAAACTTCTGAACTTGATGGGCAACCAGTTGTCTGGTCCTGTGCCTTCTGGCTTTGGAGATTTGCCACAACTGGAGGTACTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAAAATTCACCATTGCAATGGTTAGATGTGTCATCCAATTCATTCTCTGGAGAGATTCCAGAAACTCTTTGCAGCCAGGGCAATCTCACCAAGCTTATACTATTCAACAATGCTTTCTCTGGTCCAATTCCATCAAGCCTATCAACGTGCTTTTCACTTGTACGTGTTCGAATTCACAACAATTTTCTTTCAGGGACAATTCCTGTGGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCTAACAATAGTCTTTCTGGTGGAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCCTTCATTGATCTCTCAAGAAACAAACTCCATTCTTCTCTTCCCTCCTCCGTCCTTTCCATTCCAAACCTGCAAGCTTTCATTGTCTCCAACAACAACTTGGAAGGAGAAATCCCAGACCAATTCCAGGACTGTCCATCACTTGCAGTTCTTGATCTCTCATCAAATCATCTATCTGGAAGCATTCCAGCAAGCATTGCTTCTTGTCAGAAGTTAGTAAATTTGAACCTCCAAAACAACCAATTGACTGGTGAAATCCCAAAATCATTAGCTAAGATGCCTTCATTGGCCATGGTTGACCTTTCCAACAATTCTCTGACAGGCCAAATACCTGAAAGCTTTGGAATTTCTCCAGCTCTTGAAGCACTCAATGTCTCATACAATAAGCTGGAAGGCCCAGTCCCAGCGAACGGAATACTAAGAACTGTAAACCCAAATGACCTTGTCGGCAATGTTGGCCTATGTGGTGGTGTCCTCCCTCCATGTGACCAAAACTCTGCATACTCATCAAGGAAACGAAGCTTGCGCACAAAGCATATGATTACAGCATGGATCACTGGAATATCATCAATCCTAGTTATTGGGATAGCGATTGTGGTTGCTAGATCTTTGTACATAAGATGGTACACTGATGGGTTTTGCTTCCGAGAAAGATTTTACAAGGGTAGCAAAGGATGGCCCTGGAGATTGATGGCATTTCAGAGGCTTGGTTTTACTAGTACTGAGATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGCATGGGAGCCACTGGGATTGTTTATAAGGCTGAGGTACCGCAATCAAACACAGTTGTGGCAGTGAAAAAATTGTGGAGAACAGGAACTGATATTGAAGTTGGAAGTAGTGACGACCTTGTGGGGGAGGTGAATCTTTTGGGGAGACTAAGGCATAGAAACATTGTTAGACTATTAGGATTTCTTCATAATGACATTGATGTGATGATAGTTTATGAATTCATGCACAATGGCAACCTAGGAGAAGCCTTGCACGGTAGACAAGCAACAAGATTGCTTGTAGACTGGGTTTCACGGTACAACATAGCTCTAGGAGTTGCTCAAGGACTTGCTTATCTTCATCATGACTGTCATCCCCCCGTTATCCATCGAGACATCAAGTCAAACAATATATTGCTTGATGCAAATCTTGAGGCACGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCCAGAAGAATGAAACAGTCTCCATGGTTGCTGGATCTTATGGTTATATTGCCCCTGGTGAGTTATTAGTTCTATACATCTTACTTTATCAGGTCATAGCTACATTAGCTTCCAAACCACTTTAGATCAAACAGGACATGTAGCGTACACATTAGAGAAAGTATCTTACAGTTAGCATGTCATTAAATGTTTATATCTGTGAAGATTGTCTGCTTTCATATTTTCTCCACCTTAGATGTACAAATTCATGACATTTCAATGATTTACTATTTGGCAGAATATGGATATGCCTTGAAGGTAGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTCACAGGAAAGAGGCCTTTAGATTCAGACTTTGGAGAGTCAATAGACATTGTAGAGTGGATTAGAATGAAGATTAGAGACAACAAATCACTGGAAGAAGCATTAGACCCCAGTGTAGGAAATAGCAGGCATGTTGTAGAAGAGATGCTTTTAGTTCTAAGAATAGCGATTCTGTGCACTGCCAAGCTCCCCAAGGACAGACCAACCATGAGGGATGTCATTATGATGCTTGGAGAGGCTAAGCCTCGAAGAAAGAGCGGTGGCAATGATGCAGCTAACAACAAAGAGTCACCAGTTTTTAGCACATCACCAGTTAATGGCCTAATGTAG

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