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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20671 LG5 25699699 25700139 PREDICTED: ethylene-responsive transcription factor ERF098-like
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 25699853 missense_variant p.Arg96His
C/A 25699929 missense_variant p.Ala71Ser
G/T 25699935 missense_variant p.His69Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20671.1
MEGGRGVVNGNASNAEVRYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEQAARAYDAAAFRFRGHKAILNFPNEYGHTTPNPNVFSTSQPLRSSSFPSYSGGAEGSSQQQRNAAATFELEYLDNKLLEELLQTPDGTGNDSN*


CDS Sequence:
>Vu_20671.1
ATGGAGGGAGGGAGAGGAGTTGTGAATGGAAACGCTTCAAACGCAGAGGTGAGGTACAGAGGGATTCGTAGGAGGCCATGGGGAAAGTTTGCAGCAGAGATTCGTGACCCTACAAGAAAAGGTGCTCGAATATGGCTTGGAACATTTGACACTGCTGAACAAGCTGCACGTGCTTACGATGCTGCTGCTTTTCGTTTTCGGGGTCACAAGGCCATACTCAACTTCCCTAACGAGTATGGCCACACCACTCCTAATCCTAACGTGTTTTCAACTTCACAGCCTCTTCGTTCTTCTTCTTTTCCTTCTTACTCTGGTGGTGCCGAGGGTTCTTCACAACAACAGCGAAACGCTGCTGCAACTTTTGAATTGGAATACTTGGACAATAAGTTGTTGGAAGAACTCCTTCAGACGCCTGATGGAACAGGCAACGACTCCAATTAA


Promoter Sequence:
>Vu_20671::LG5:25700139-25702139(-)
TAACAATTTTTTAAAATTTCTACAAACAAAAAAATATAACCAATATTATTATTATTATTATTATTATTATTATTATTATTATTTTCGTTTACTATAAAGTGTTTGAGTTTTTTTATCGTACTTTTTCTTTTCTTTTATTCTATCTATTTAATTATGGTAAAAACAGTGAACGGTATTATTGCATATGAATAATTTATCTATTGCAAAATATAATAGAGTAAAACTGAAAATTACACAGTTTAGTTTTGTTAAAAGTATGTTTAATTTAAATTATTTTGAAAAACACTGTATTATGGTAGTGTTTTTTTAAAGATTTTTTAAGAAGTGGAATTTTTCTTAATTTAAATAAGTATTACTAAACATTCAAAATAAAAGTAAAAACAGAAAGTAAAGGAGACATATTATTAGTTTAGATGGATTAGCCATTTCATTTTGAAAAAAAAACTCTCTAGAATTTTCAGAATTTGGAAAAAAGAAAACGCTTACTGTTTTTCACAATTTTTATTTTCTTTCATACCATTTGTTATCAAAATTTCCATAATATTTATAAAAGTTACTCCAACATTCAAATCAAATAAAAATCAAGTTAAATGATAATGAATGTTAAAATAATCAAACCAATTCATTATCTAAACTATTTATTTATAGTTTTGTGTTGAATTTTTATTTTTTTATTACTTAATATGTGTTTTATGTTGCTAAGTATACTTTATCTATGTTGCTTATTTATTAACCCACTAACTATGCCATCGAGACCCATCCATTAAGTACTGTACAATATATATATATTTCTTTCCTAACCTTTTTGAAACACTCTACCTACGTTAGAACAATGCAAACAACCGTCACCCCTACATAACACCATCAAATCAATCAAGGAGCAGCATGCCGGCATGTCCTCAACATAATGACAAACGTCGTGGCAAGATACAACCCATGCACCTACTTCCATGCATTCTAATCAACACCTTAAACTCAACGACTTTTATATTTCATAAGTAAAATTTAAAATTAAATATGTTTTTTCCCATAAACTTAAATATGAAATTAAAAATTGTTATTATTTCTTATTTCTTATTTTTTATAAAGTTTAGTGTTTTAAATTTTAAAAGTAAAAAAAATATAGTATTTTTAATTTAATTACATGAAATTTTTTTAATATATTAAACGATATTTTAAATTAAAGATTGATTAAATTAAATAAAATATATATATATATTTATTTTGAAAATTTGAAAATTAAAATATATCAAAAAGTAATATATAAATGAATTTTAATTTTACATATAAGTGTAGGATTATAAACATATTCAATGTTAAAAGTTAAACATTATATTTTGCTTTTCACAGAAGTAAAGATGAGTTAGTTTGGATTATCCTATCAAGTTCGTATTTTTCTAAAGCCAAAACTAAAGGTGCAAAACTATTAACACCATAGAAGTCTTATATCAATTACGTGTATGTGATGTCTGGCCACTTCCGCGAAGGGCAGGAAGAGTTGGGTTGGGCCAGGGCCCAAGGCCCAAACCTTATATCCGATATCTGATCATGGCGACGTGAGAGGGCATTATAGGATAATTAAGTTGGAGTGGCGCATGTACGTGCATCTGGCATTCGTCATGCATGAACTTATATTTTCTTATATGCTTATCACGAATGACATTCTTACTACTGGTTTAGCTATAACTTAATGATGCAGTGTCTGTTTTGCCAACAACATAGATTACTACTGGCTTTTAGATAAATATTTTCTAAAGTAGCTATAAATATTACTTTATAGTTCATTGGTCTAATGTGTCAAACACCACTTATATTTAATTAATTACAGAATTAAAAAAGCAGCTGAAGTTCAAACCGTCACTTACGACCTACATGCATGGTCAAGCTTTGCCACGAAGTCTCATGCATATAAATACTAACCACAAACCAATTACCACCTTGCAATCTCTGTTAAGATATCTTCACCACTGTAAATCAAGAACCAAAAATTTGAAGTTTGA


Gene Sequence:
>Vu_20671(-)
ATGGAGGGAGGGAGAGGAGTTGTGAATGGAAACGCTTCAAACGCAGAGGTGAGGTACAGAGGGATTCGTAGGAGGCCATGGGGAAAGTTTGCAGCAGAGATTCGTGACCCTACAAGAAAAGGTGCTCGAATATGGCTTGGAACATTTGACACTGCTGAACAAGCTGCACGTGCTTACGATGCTGCTGCTTTTCGTTTTCGGGGTCACAAGGCCATACTCAACTTCCCTAACGAGTATGGCCACACCACTCCTAATCCTAACGTGTTTTCAACTTCACAGCCTCTTCGTTCTTCTTCTTTTCCTTCTTACTCTGGTGGTGCCGAGGGTTCTTCACAACAACAGCGAAACGCTGCTGCAACTTTTGAATTGGAATACTTGGACAATAAGTTGTTGGAAGAACTCCTTCAGACGCCTGATGGAACAGGCAACGACTCCAATTAA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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