Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20448 LG5 23174280 23177113 PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, phosphorylation, phosphorylation, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein kinase activity, protein kinase activity, kinase activity, protein kinase activity
SNP Position Effect Amino acid change
A/G 23174508 missense_variant p.Asn77Asp
C/T 23174588 synonymous_variant p.Ala103Ala
G/A 23174693 synonymous_variant p.Gln138Gln
T/G 23174706 missense_variant p.Ser143Ala
A/G 23174725 missense_variant p.Asp149Gly
T/C 23174727 synonymous_variant p.Leu150Leu
T/A 23174890 stop_gained p.Leu204*
C/A 23174906 synonymous_variant p.Pro209Pro
T/C 23174954 synonymous_variant p.Ser225Ser
G/A 23175259 missense_variant p.Gly327Glu
G/C 23175299 missense_variant p.Lys340Asn
C/A 23175328 stop_gained p.Ser350*
A/C 23175334 missense_variant p.Gln352Pro
A/T 23175338 synonymous_variant p.Ile353Ile
G/T 23175401 synonymous_variant p.Ala374Ala
G/C 23175436 missense_variant p.Ser386Thr
C/A 23175437 missense_variant p.Ser386Arg
C/A 23175443 stop_gained p.Tyr388*
A/C,T 23175686 synonymous_variant p.Thr469Thr
A/T 23175698 synonymous_variant p.Pro473Pro
C/A 23175789 missense_variant p.Pro504Thr
G/A 23175949 missense_variant p.Gly557Glu
A/T 23175954 missense_variant p.Ile559Phe
T/A 23176006 missense_variant p.Val576Glu
A/G 23176043 synonymous_variant p.Leu588Leu
C/G 23176044 missense_variant p.Leu589Val
A/G 23176097 synonymous_variant p.Arg606Arg
T/C 23176106 splice_region_variant&synonymous_variant p.Val609Val
T/A 23176245 intron_variant
G/T 23176246 intron_variant
T/A 23176275 intron_variant
A/G 23176276 intron_variant
G/C 23176500 intron_variant
C/T 23176577 intron_variant
T/G 23176677 intron_variant
C/T 23176770 synonymous_variant p.Ser631Ser
G/A 23177014 missense_variant p.Ala713Thr
C/A 23177015 missense_variant p.Ala713Asp
A/G 23177017 missense_variant p.Ile714Val
A/T 23177021 missense_variant p.His715Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20448.1
MATTTFCTYLFLLSVSLSIFNLSSSSSERDTLLSFKASIVDSKKALSGWSNTSSNHYCNWTGITCSNTPLLSVISINLQSLNLSGDISSSICDLPNLSYLNLADNIFNQPIPLHLSQCGSLETLNLSTNLIWGTIPSQISQFSSLRVLDLGRNHIEGNIPESLGSLKNLQVLNMGSNLLSGSVPAVFGNLTKLEVLDLSQNPYLVSEIPEDIGELENLKQLLLQSSSFQGKIPDSLVGLVSLTHLDLSENNLTGGVPQALPSSLKNLVSLDVSQNKLLGPFPSGICKGEGLVNLCLHSNSFNGSIPNSIDECKSLERFQVQNNAFSGDFPAALWSLPKIKLIRVENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQGLGLVKSLYRFSASLNRFDGELPPNFCDSPVMSIVNLSHNSLSGQIPALKKCRKLVSLSLADNSLTGEIPSSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLDGNPGLCGPGLPNSCSDDMPRRHIGSITTLVCALISLAFVAGTAIVVGGFILYRRYSKGNRVGVWRSVFFYPLRITEHDLLVGMNEKSSMGNAGFFGRVYVSILNSEAASSCYIAPENGYSKKATEQLDSYSFGVVLLELVSGRQAEETESSDSVDIVKWVRRKVNIANGVHQVLDPKISNTFHQEMIGALDIALRCTSVVPEKRPSMVEVVRSLQSLESRSCIANLHEPNEEPSPV*


CDS Sequence:
>Vu_20448.1
ATGGCCACTACTACATTCTGTACATACCTATTCCTTCTCTCTGTGTCCCTTTCAATCTTCAATCTTAGTTCATCTTCATCAGAGAGGGACACCCTTCTCTCCTTCAAGGCCTCCATAGTAGACTCTAAGAAAGCCTTGTCTGGCTGGTCCAACACTTCATCAAACCATTACTGTAACTGGACTGGAATAACCTGCTCCAACACACCTTTACTCTCTGTAATTTCTATCAACCTTCAGAGCTTAAACCTTTCTGGGGATATCTCATCTTCCATTTGTGACCTTCCAAATCTGTCTTATCTCAACCTTGCCGATAACATCTTCAACCAACCCATCCCTCTTCACCTCTCTCAGTGTGGTTCCTTGGAGACTTTGAATCTCAGTACCAACCTCATATGGGGCACTATCCCATCTCAGATTTCTCAGTTTTCTTCCTTGAGAGTGCTCGATTTGGGAAGAAACCACATAGAAGGAAATATCCCTGAGAGCTTAGGCTCCTTGAAGAACCTCCAAGTCCTCAACATGGGAAGCAACTTGCTTTCAGGTAGTGTGCCTGCTGTCTTTGGCAATCTAACTAAACTTGAAGTTCTTGATTTGTCTCAGAATCCATACTTGGTGAGTGAGATTCCCGAGGATATCGGCGAGCTTGAAAATCTTAAGCAGCTTCTGTTGCAAAGTTCTTCTTTTCAAGGCAAAATTCCAGATTCTCTGGTGGGCCTGGTTAGTTTGACCCATTTAGATCTCTCTGAGAACAACCTAACAGGTGGGGTTCCTCAGGCTCTACCATCTTCTCTGAAGAACCTGGTTTCCTTAGATGTTTCACAAAACAAGCTTTTGGGGCCATTTCCAAGTGGCATCTGCAAAGGAGAAGGCCTTGTAAACCTCTGTCTCCACTCAAATTCCTTCAATGGTTCAATACCCAACTCCATTGATGAATGTAAGAGTCTTGAGAGATTCCAAGTCCAGAACAATGCCTTCTCTGGAGATTTCCCCGCTGCCTTGTGGTCATTACCCAAAATCAAGCTCATTAGAGTTGAAAACAACAGATTCTCAGGCCAAATACCCGAGTCAATTTCAGGAGCTGTTCAGTTGGAGCAAGTTCAGCTCGACAACAACAGCTTTGCGGGTAAAATTCCTCAAGGTCTTGGCCTTGTCAAGAGCTTATACAGATTTTCTGCTTCTCTCAACCGTTTCGATGGTGAACTTCCTCCTAACTTTTGTGACTCTCCTGTTATGAGCATAGTAAATCTCTCCCACAATTCTCTTTCTGGTCAAATACCAGCGCTAAAAAAATGCAGGAAACTAGTTTCATTGTCTTTGGCCGATAACAGTCTAACTGGAGAAATCCCCTCTTCTCTTGCCGAGCTACCTGTACTCACCTACCTTGATCTTTCAGATAACAATCTCACAGGTTCAATCCCACAAGGGCTTCAGAACTTGAAGCTTGCTCTTTTCAACGTCTCCTTCAATCAGTTATCAGGTAAAGTACCATACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGACGGAAACCCTGGTCTTTGTGGCCCTGGATTGCCTAACTCTTGTTCTGATGACATGCCAAGACGCCACATTGGTAGCATTACAACCTTAGTATGTGCTCTCATCAGTTTAGCCTTTGTTGCTGGAACTGCCATTGTTGTTGGTGGGTTTATTTTGTATAGGAGGTATTCCAAGGGAAATCGAGTGGGGGTCTGGCGATCAGTGTTCTTCTATCCTCTCAGGATTACCGAGCATGATCTACTGGTAGGGATGAATGAGAAAAGCTCAATGGGAAATGCTGGGTTTTTTGGTAGAGTTTATGTTTCAATTTTGAACTCTGAAGCAGCATCTTCATGTTACATCGCACCAGAAAATGGTTACAGTAAGAAAGCAACTGAACAATTGGACAGCTACAGCTTTGGCGTGGTACTACTGGAGCTAGTGAGTGGTAGGCAAGCAGAAGAAACGGAGTCAAGTGACTCAGTTGACATTGTGAAGTGGGTTAGGAGGAAAGTGAACATCGCTAATGGGGTGCATCAAGTTCTTGACCCAAAAATATCAAACACTTTTCACCAAGAGATGATTGGAGCTCTAGATATTGCACTTCGTTGCACTTCTGTGGTGCCTGAGAAAAGGCCATCCATGGTAGAAGTTGTTAGAAGCCTTCAATCCCTGGAGTCAAGAAGTTGCATTGCAAATTTGCATGAACCAAATGAGGAACCCTCACCAGTCTGA


Promoter Sequence:
>Vu_20448::LG5:23172280-23174280(+)
CTATGTCTCTTATCAACAACACCCTCACTCACGAGAACACTTTCTTCCTAATTTTAAAAATATTAAAATTTTGGTACCCAATAAAACAAAATTCTTATAATAAATACCTAATAAAAAACTCAAAATTATTATAAAAATTTAAAATTAATTAAATTACATTAATTTTTAAAGTTGAATATATTTTAGGGAAAATGATACTTGAACAACCATTTTTGACAACATTTAGACACGCGCACACGTGTCAAAATCTGAGTGGTCCATTTTCATTTAATTTTTCCAACTGGACCACTCAGATTTTGACACGTGTGCGCGTGTCTAAATGTTGTCAAAAATGGTTGTTCAAGTGTCATTTTCCTATATTTTAGTCTCTAAAAAAAATTGTTTATTACGTTTAAAAGTTTGATATATTTTTATTTTTCAATTTATAAAATGAACTAAAATAGTTTTCTTAATTTAAATATATTAATTTTTTTATGTGTTAAACTATTTTAAAAACAAATATTTAAATTATATTGACTCACTATCAAATTATGTAAACAACACCAACATTAATTAAAAAATTCTTTTAATAAGTAGAAAAATTAACATAACTGATACATTAACCCAAAATATTTTGGGTATATAAAAGAATTAACATAGTTGAATTAAAAAAAAATATTTATTATTTTTTAAATTGAAAAATAAAATTATGTTAAAATTGCAAGATAAATTTTAATTTTATATTAAAATTTAAAAATAAAAAATATATTTAATTATGTTTTTAACATTAAAAATATTATTGTATTAGATTAGTAATAGAAGTTATTTTCCCGAGGAGAAGATGCCAAGTTTAATGAAAAGTTTTGTTTGGTTATTGGGCATAATCAAAGCTGTCTGACTTCTGAGTTCTGACGGTCAATTGGGGACCCCACTGCGAAACACAAATGGACAATGTGGCCACGTGACCCAGTGACCTAGCCAAAACGTCTTCAATGTAATGAGGTACAACATAACATGCATTCAATTCGTTTCCCCTCGAAGGTAATATTAACAACAATACTAAATAAAATAGATAAATGTTTGGTTTGGGTGTTCCAAGGTCAAATCCTACATTACTGTTCGCTTCTTTGGATTCGATTTCAAACGTTGAAAAAACTCACCTCTTTCCCTTCTTGGGGTGAAAAGTTCCGCGACATTAGTGACTGAATGCTTTATAACAGTGACAACTATTTTCAGACAATGCCTTCTAACTTCTCACCTGACATTGTTTCCTCTGTTTCGGAGAAATTTACTACTACTGGTAACAACAAATAAATACACTAATAAGTGAAACAGAGCAGACGGGTAAGAGAGACTATGCTAGGTTCCTAGGGTGGATATAAAGTTCAAATTAACTTTAGTATATATCATTATTATAATATTTTATAATGTTAAGTTCAGATACATGTTCTTATTTTTTAAAGGAAGTGTCTGGGACAAATAAAAGAATGTGTAAACATAAATCTTTGTAAAATCCTGTTTCTGCTGGTTTCCAACGTGTGTTTTTTCACAAAATAATCTATATTTTATCACCCGTGTAAAAGTAAAACTTAACACATTCGCATGTGAGTAAACACTGAACTTATTTAGTCTTATGTTTATGATATTATGTTTTTTTTTTATGTTTACGACAGTTTGACATTTTATGTTTTCTTATCTCTTGATTCCCTTCTATTATCTCTTTCTGTGTTGAAATTATTGTACTATTTTCTTGTCCAGATACAATTCCTTTTGAACACAATGTCATGAAGGGAAAAAAGTCTTTAAAAGAGAGTGAAGGGGAGACTTTTGTGGTTTTATCAGCAAATTTCTCAAATGCCATGATGAGTTTTTGCACGTAAAAATGCAAGCTTTTTTTTCTTTCCAGCCCATCGAGCTCCAGTAATCTCACTATACACATTCCTTCACTTAACAGTTAACACGGATATATAGAAACCGCTGAGAACAACTCAAAGCAAGTTCTTTTGCAGTCACCAAGCTCA


Gene Sequence:
>Vu_20448(+)
ATGGCCACTACTACATTCTGTACATACCTATTCCTTCTCTCTGTGTCCCTTTCAATCTTCAATCTTAGTTCATCTTCATCAGAGAGGGACACCCTTCTCTCCTTCAAGGCCTCCATAGTAGACTCTAAGAAAGCCTTGTCTGGCTGGTCCAACACTTCATCAAACCATTACTGTAACTGGACTGGAATAACCTGCTCCAACACACCTTTACTCTCTGTAATTTCTATCAACCTTCAGAGCTTAAACCTTTCTGGGGATATCTCATCTTCCATTTGTGACCTTCCAAATCTGTCTTATCTCAACCTTGCCGATAACATCTTCAACCAACCCATCCCTCTTCACCTCTCTCAGTGTGGTTCCTTGGAGACTTTGAATCTCAGTACCAACCTCATATGGGGCACTATCCCATCTCAGATTTCTCAGTTTTCTTCCTTGAGAGTGCTCGATTTGGGAAGAAACCACATAGAAGGAAATATCCCTGAGAGCTTAGGCTCCTTGAAGAACCTCCAAGTCCTCAACATGGGAAGCAACTTGCTTTCAGGTAGTGTGCCTGCTGTCTTTGGCAATCTAACTAAACTTGAAGTTCTTGATTTGTCTCAGAATCCATACTTGGTGAGTGAGATTCCCGAGGATATCGGCGAGCTTGAAAATCTTAAGCAGCTTCTGTTGCAAAGTTCTTCTTTTCAAGGCAAAATTCCAGATTCTCTGGTGGGCCTGGTTAGTTTGACCCATTTAGATCTCTCTGAGAACAACCTAACAGGTGGGGTTCCTCAGGCTCTACCATCTTCTCTGAAGAACCTGGTTTCCTTAGATGTTTCACAAAACAAGCTTTTGGGGCCATTTCCAAGTGGCATCTGCAAAGGAGAAGGCCTTGTAAACCTCTGTCTCCACTCAAATTCCTTCAATGGTTCAATACCCAACTCCATTGATGAATGTAAGAGTCTTGAGAGATTCCAAGTCCAGAACAATGCCTTCTCTGGAGATTTCCCCGCTGCCTTGTGGTCATTACCCAAAATCAAGCTCATTAGAGTTGAAAACAACAGATTCTCAGGCCAAATACCCGAGTCAATTTCAGGAGCTGTTCAGTTGGAGCAAGTTCAGCTCGACAACAACAGCTTTGCGGGTAAAATTCCTCAAGGTCTTGGCCTTGTCAAGAGCTTATACAGATTTTCTGCTTCTCTCAACCGTTTCGATGGTGAACTTCCTCCTAACTTTTGTGACTCTCCTGTTATGAGCATAGTAAATCTCTCCCACAATTCTCTTTCTGGTCAAATACCAGCGCTAAAAAAATGCAGGAAACTAGTTTCATTGTCTTTGGCCGATAACAGTCTAACTGGAGAAATCCCCTCTTCTCTTGCCGAGCTACCTGTACTCACCTACCTTGATCTTTCAGATAACAATCTCACAGGTTCAATCCCACAAGGGCTTCAGAACTTGAAGCTTGCTCTTTTCAACGTCTCCTTCAATCAGTTATCAGGTAAAGTACCATACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGACGGAAACCCTGGTCTTTGTGGCCCTGGATTGCCTAACTCTTGTTCTGATGACATGCCAAGACGCCACATTGGTAGCATTACAACCTTAGTATGTGCTCTCATCAGTTTAGCCTTTGTTGCTGGAACTGCCATTGTTGTTGGTGGGTTTATTTTGTATAGGAGGTATTCCAAGGGAAATCGAGTGGGGGTCTGGCGATCAGTGTTCTTCTATCCTCTCAGGATTACCGAGCATGATCTACTGGTAGGGATGAATGAGAAAAGCTCAATGGGAAATGCTGGGTTTTTTGGTAGAGTTTATGTTGTGAGTTTACCTAGTGGTGAACTAGTAGCTGTGAAGAAGTTAGTCAATTTTGGAAACCAGTCCTCCAAAAGTTTGAAAGCGGAGGTGAAGACTCTGGCAAAAATTAGGCACAAGAATGTTGTTAAAATTCTGGGGTTCTGCCACTCCGATGAGTCAGTGTTTCTCATTTATGAGTACTTGCACGGAGGGAGCTTAGGGGATTTGATTTCTCGTCAGAACTTTCAGCTGCAGTGGGTGGTTCGATTAAAAATTGCCATTGGAGTTGCTCAAGGGCTGGCATATCTTCACAAGGATTATGTCCCTCACTTGCTTCACAGAAATGTCAAGTCAAGTAACATTTTGTTGGATGCAAATTTCGAGCCAAAGCTCACAGATTTTGCTCTTGATCGAGTTGTGGGAGAAGCTTCATTTCAGTCAATTTTGAACTCTGAAGCAGCATCTTCATGTTACATCGCACCAGGTATGATAAGCTGTGTTCAAACAACATCAAATGCATTCTCCCATAATTGAGCTAACTCATTGGTAGAGTATTTTTTTCATACAAATTAAGACCTACATGCATGCTTGGATTTTCACTTTATATGAAATAGCTTGAATTTTGAGATAAACTCTTAAGATCGTTGTTGTGTTGTTGCAATGCAGAAAATGGTTACAGTAAGAAAGCAACTGAACAATTGGACAGCTACAGCTTTGGCGTGGTACTACTGGAGCTAGTGAGTGGTAGGCAAGCAGAAGAAACGGAGTCAAGTGACTCAGTTGACATTGTGAAGTGGGTTAGGAGGAAAGTGAACATCGCTAATGGGGTGCATCAAGTTCTTGACCCAAAAATATCAAACACTTTTCACCAAGAGATGATTGGAGCTCTAGATATTGCACTTCGTTGCACTTCTGTGGTGCCTGAGAAAAGGCCATCCATGGTAGAAGTTGTTAGAAGCCTTCAATCCCTGGAGTCAAGAAGTTGCATTGCAAATTTGCATGAACCAAATGAGGAACCCTCACCAGTCTGA