Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_20435	LG5	22948197	22949027	PREDICTED: dehydration-responsive element-binding protein 2F-like	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	positive regulation of transcription, DNA-templated, response to stress, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated
Cellular Component	is active in	nucleus
Cellular Component	located in	nucleus
Molecular Function	enables	DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, protein binding

No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_20435.1

MDTCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFSTAEEAAMAYDEAARRLYGPDAYLNLPHLQPRSTSPITPGKFKWFPSKNFISMFPSCGLLNVSAQPSVHFIHQRLQELKQNSVERQSPNSSSNDPEAEIQNVVDNAESPLKDSQTSSEEVPGDIQEKPQIDLHEFLQQLGILKDEKQSADSTESSTVPEAVFRYENDELGVFSDTSVNWEALIEMHGIAGIQELESTQLEAYGPNDDLTFSTSIWNF*

CDS Sequence:
>Vu_20435.1

ATGGATACTTGCAAGAAGTCACCCCTGAAGCCATGGAAGAAAGGGCCAACTAGGGGGAAAGGTGGTCCACAAAATGCCTCTTGCGAGTACCGAGGTGTTAGGCAGAGAACTTGGGGCAAATGGGTTGCTGAGATAAGAGAGCCAAAGAAGAGAACCAGACTCTGGCTTGGTTCTTTTTCCACAGCTGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTATGGACCAGATGCATACCTTAATCTTCCCCACCTGCAGCCCAGGTCCACTTCACCTATTACACCAGGAAAGTTCAAATGGTTCCCTTCCAAGAACTTCATTTCGATGTTCCCTTCCTGTGGATTACTCAATGTAAGTGCTCAACCCAGTGTTCATTTTATCCATCAGAGGCTACAAGAGCTAAAGCAAAATTCAGTTGAAAGGCAATCCCCAAATAGTTCGTCCAATGATCCAGAGGCAGAAATTCAGAATGTAGTAGACAATGCAGAAAGTCCTCTAAAAGACTCTCAAACATCATCAGAGGAGGTTCCAGGAGATATTCAAGAGAAACCCCAGATAGACCTACATGAGTTTCTTCAACAGCTGGGAATACTTAAAGATGAAAAACAGTCAGCTGATAGCACAGAAAGTTCAACAGTTCCGGAAGCTGTGTTCAGATATGAAAATGACGAATTGGGAGTGTTTTCTGACACGAGTGTTAACTGGGAGGCTTTGATTGAGATGCATGGAATTGCTGGTATTCAGGAATTAGAATCCACCCAGCTTGAAGCATATGGCCCAAATGATGACCTTACTTTTTCAACTTCCATTTGGAACTTCTAA

Promoter Sequence:
>Vu_20435::LG5:22946197-22948197(+)

GAAATTATTGATTCATTTTTTATGCAATTCCCAAAGATGAGCTTGCTTCATATTTTGTTGGTATAGTTATGCCATTGTTATGATAATTACCGTTCATGGATATTTATTGACTTGCAAAAACCCCAAGCTATCCCTCAACCAGGACAAAATGCTATTTCTAAGACAACTGTGGAGGAAGAGTTCTGAGGGTATTAATTTCATCGTTCATCACATTTTACAAGTGATGTGATGTGACTTTAGAAGCACCTAACTGCGTTATGTTTCTATGTCATTGTTTAACAAGAATGATTTTCCATTGCTTCCATAACTCTTCATTTTTAGCTTATATACACAAGTTTTCAACAATTGCTAGATTTCACTCAGTAAGAGGGAGAGCAGAACTTTGATTTTGGCGACCCACAATTTCCTATGAAGCAAAATTTGATATTTGGTTCTCGTGTTTGAGAAGGATAATATATGCACACATCAAAATTGACAAGCAAAACTTCATCTTGGTAATTGTTATATTGTATAATAACGACTCCATTTTTAATTTCAAAATATTGGATTTATGAGAAATTTTTATATAGTATTTAACTTTACTATTTTTATTTAATATTATTCCTGTTGGATGAATTATATTATATATACTCAATCCCAGATTTAGAGGGCACTTATTCAATTTGTGAACAGTTCAAAGATCTGTTGAAACCCAAAATAATATCTTGCAGTCTCTTGCTTATAGGGATTGGATTTTTCTGGCCTTTCCTGAAAAGAATTTTCTACATAATATTCATCAGTGTAAGCTTATATTATGATATTCTCTCCAAGTCCTTTGTGTATGCCAGCTGTTCTCTCTGCCACAAGGATAACAATGTCATAAATGTTATATTGAAAGCATATAGACGTTATCATTCACATGAATATTTCCAGAATTGGCATGGTTATTTATCACTCATCAGCATGATATCATTAGGTATGATATGTGGAGATTTTGGGGGCATGAGAGGTAATTGACGATGAGATGCAGAGAGAGAGGAATCATGGGATAAAGGTGAGCAAAGTCTCGAGAATCAGGCTGTGTATGGCAGGACAACATGTGAAATGTAGTTCGTGAATTGCAAATTGTTGAGGTGGGTCTTATTTAAAATCCTTCTCCTCAAGGACAGATTCAACACTGTTATGTAGTTTATAGAAATAGAATCCAAAGAAGAGTGTCAGAGTTCATTCAACACAATCACTGTATCAGTAGGAAAAAGTCTTGCAAATATTATAGTCGCCACCTCAACAACATTCAATACCCCTTTTTTCTCTCTTTCATACACTCATTGTATCGGTTTCATCACTATCTTCAACCTATATATTATGTATATTAAAGAAGGTTATTGTGGTCTCAAATAGGAGCTTTGTTGTGTAACAATCATGACAACTGGGTAGGTACGGAGCTACCAAACCCTTGGACGTATAGCATTGTCATTTTATAGTTCAAGGACATTCTCCTGCATAAGGCATGTCAACGTCGACGCGTACTACTCTCACTCCAAACACTCTTCTATATATATATATACAAACCATTCAATTCAAAATCCTTGGATTTCAGCATTTCCCTTGTGGACTTTTAATTATCTTTCGTTTTCTAAAACAACAGAAATTTAGGTGTCATGTTTTTGTAGTAAACAAAGTTATAATTACTAGCACCACGTGTTAATACCATGCATGGCTACATAGACATCAACCTGTGGTGGCAGTGCCAAGGATGTAAGAGAGAAACATAAAAACCTAAAAGATTATCGTAAAAAAAGAAAGAAAAAGGGATTTGAAACAATCACTGAGTAGACAGTCAATAACGGTCACATGGGTTTTGCTACTTCTCCAAACGTGAAGACATTTATACCAACCTACACTCCTTGCTCCTACATATCCCGCGCCTTGCATGCAGTTCCAAGTATCATCAAACAGTGATACTCAAAGCACCACTTTCCAGTTATCTAAGTTATTCAACTATCACAGTATTTTAACCA

Gene Sequence:

>Vu_20435(+)