Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20404 LG5 22580944 22583574 disease resistance protein RPM1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to bacterium, defense response to bacterium, defense response to bacterium
Cellular Component   located in   nucleus
Molecular Function   enables   ADP binding, adenylate cyclase activity, ADP binding
SNP Position Effect Amino acid change
A/G 22580987 missense_variant p.Glu15Gly
C/T 22581047 missense_variant p.Ala35Val
G/T 22581114 missense_variant p.Glu57Asp
C/G 22581141 synonymous_variant p.Leu66Leu
T/C 22581171 synonymous_variant p.Ala76Ala
C/T 22581199 stop_gained p.Gln86*
C/G 22581207 synonymous_variant p.Leu88Leu
A/C 22581208 synonymous_variant p.Arg89Arg
A/G 22581355 missense_variant p.Ser138Gly
G/A 22581379 missense_variant p.Val146Ile
T/A 22581380 missense_variant p.Val146Asp
T/G 22581456 missense_variant p.Asp171Glu
A/C 22581481 missense_variant p.Ile180Leu
C/T 22581485 missense_variant p.Ser181Leu
T/C 22581498 synonymous_variant p.His185His
C/A 22581509 missense_variant p.Ala189Asp
G/A,* 22581517 missense_variant p.Gly192Arg
G/T,* 22581518 missense_variant p.Gly192Val
C/A 22581523 missense_variant p.Gln194Lys
C/G 22581603 missense_variant p.Asn220Lys
T/G 22581613 missense_variant p.Tyr224Asp
C/G 22581769 intron_variant
G/A 22581835 intron_variant
A/T 22581855 intron_variant
A/C 22581904 intron_variant
T/A 22581966 downstream_gene_variant
G/A 22582141 synonymous_variant p.Gly302Gly
T/A 22582200 missense_variant p.Leu322His
C/A 22582257 missense_variant p.Ser341Tyr
A/T 22582782 downstream_gene_variant
C/T 22582802 downstream_gene_variant
A/T 22582919 downstream_gene_variant
G/A 22582975 downstream_gene_variant
G/A 22582993 downstream_gene_variant
A/T 22583000 downstream_gene_variant
G/A 22583023 missense_variant p.Ser456Asn
G/A 22583076 missense_variant p.Val474Met
T/A 22583077 missense_variant p.Val474Glu
C/T 22583104 missense_variant p.Thr483Ile
T/G 22583177 missense_variant p.Ile507Met
T/C 22583192 synonymous_variant p.Phe512Phe
T/C 22583199 stop_lost p.Ter515Argext*?
A/T 22583205 missense_variant p.Met517Leu
C/T 22583270 synonymous_variant p.Val538Val
G/T 22583282 missense_variant p.Leu542Phe
T/C 22583283 missense_variant p.Ser543Pro
T/A 22583418 stop_lost p.Ter588Argext*?
G/T 22583466 missense_variant p.Ala604Ser
A/G 22583525 synonymous_variant p.Glu623Glu
A/T 22583526 missense_variant p.Thr624Ser
C/T 22583527 missense_variant p.Thr624Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20404.1
MAEYFVFEIAESLLEKLASNLYEQVSRAFDLYDDAQSFRDTLSIIKDVLLDAEEKKEKKHGLREWLRQIRNVCLDAEDVLDGFECQNLRKQVLKASGTTRMKVNHFFSSSNSLVFRFRMARQIKNVTRRLDKIAADGSKFGLERIVMDHSPLQRREMTYSHVDASGVIGRDKDKEEIIKISMQPHPNGAGYGDQSVCIIPIVGIGGLGKTTLAKLVFNDNRMDYLFQLKMWVCISDDFDIRQILIKIINSATDPTISVEGEEKEHPYLVDIGKEIVKKCRGVPLALKTSGSSLFSIFDLERWEILRDHELWNRKQQKDDILPSLKLSYDQMPSYLRHCFAFFSLYPKDFGFTCAEIANFWATLGLLRSPFGSQKIENVGKLYINELYSRSFLEDFGTVYYFKLHDLVHDLSLYVAKEEFLMVNSHTRSIPEQVRDISVVENDSLRHTVFPKSRGAQAQLPSLEVLIIQSCGKLECLPFHILPKLEVLIVTRCLMLILSLNSEIPIQRLKMKYLHIEQCPQQLALPEWIKAASNTLRTLSILNCHCLEMLPEWLSTMTRLKMLHIVNCPQLFHLPCDMHCLRALEDLIIDGCPELGRKCEPHSGEHWPFIAHIKCVSIGETRKRKLLFQMLSRLGLNCTQ*


CDS Sequence:
>Vu_20404.1
ATGGCTGAATATTTTGTCTTCGAGATTGCTGAATCACTGCTGGAGAAGCTTGCATCTAATCTTTATGAACAAGTTTCTCGAGCCTTTGATCTGTATGACGATGCGCAAAGTTTCAGAGACACCTTGTCAATAATAAAAGACGTTCTCTTGGATGCTGAGGAAAAGAAGGAGAAGAAGCATGGATTGCGTGAATGGCTCAGGCAGATTCGAAACGTATGCTTAGATGCTGAAGATGTGTTGGATGGATTTGAGTGCCAAAACCTCAGAAAACAAGTTCTCAAAGCTTCCGGCACCACCAGGATGAAGGTAAACCACTTCTTTTCTTCATCTAATTCTCTTGTTTTCCGTTTTAGGATGGCCAGGCAAATAAAAAATGTTACACGTAGATTGGATAAGATAGCAGCTGACGGGAGCAAGTTTGGTCTTGAGAGGATTGTTATGGATCACAGCCCTCTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCTGGGGTGATAGGAAGGGATAAGGATAAGGAAGAAATTATCAAGATTTCGATGCAACCTCATCCTAATGGTGCTGGTTATGGAGATCAAAGTGTTTGTATTATTCCCATAGTGGGTATTGGAGGGTTGGGAAAGACCACACTTGCAAAGTTGGTGTTCAATGATAACAGAATGGATTATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACATAAGGCAGATACTTATTAAAATCATCAACTCTGCTACTGATCCAACCATTTCCGTGGAAGGTGAAGAAAAAGAACATCCATATCTAGTGGATATTGGAAAAGAAATAGTGAAAAAGTGCCGAGGGGTTCCACTAGCACTGAAAACTTCAGGAAGTTCCCTGTTCTCAATTTTTGATTTAGAAAGATGGGAAATTTTGAGAGACCATGAGCTATGGAACCGAAAACAACAGAAAGATGACATTTTACCTTCCCTAAAGTTGAGCTATGATCAAATGCCATCCTATCTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCAAAAGATTTTGGTTTTACCTGTGCTGAAATTGCCAACTTCTGGGCCACACTCGGATTACTTCGATCTCCATTTGGAAGTCAGAAGATAGAGAATGTTGGAAAACTGTATATAAATGAGTTATATTCAAGATCATTTCTGGAGGACTTTGGCACAGTTTACTATTTTAAACTACATGATTTGGTACATGATCTTTCGCTGTATGTTGCGAAAGAGGAGTTTCTAATGGTGAACTCCCACACTCGCAGTATACCAGAGCAAGTAAGGGATATATCAGTTGTTGAGAATGATTCACTAAGGCATACTGTGTTCCCCAAGTCCAGAGGGGCACAAGCACAACTCCCGTCCCTTGAGGTTTTGATCATTCAATCATGTGGGAAGCTGGAGTGCTTACCTTTCCATATTCTCCCTAAACTTGAGGTTCTGATAGTAACAAGGTGCTTGATGCTAATTCTGTCCTTGAACAGCGAAATACCAATCCAAAGATTGAAGATGAAATATTTGCATATTGAGCAATGTCCACAGCAATTGGCGCTGCCCGAATGGATTAAAGCAGCGTCCAACACTTTGAGAACATTGTCAATTTTAAATTGTCATTGTCTTGAGATGCTTCCCGAGTGGCTTAGCACAATGACACGTCTTAAGATGCTTCATATTGTTAACTGTCCTCAGTTGTTTCATCTGCCATGTGACATGCATTGTCTAAGAGCCCTTGAAGATTTGATCATTGATGGTTGTCCTGAATTGGGTAGAAAATGTGAACCTCATTCTGGTGAGCACTGGCCCTTCATCGCTCACATCAAATGTGTTTCCATTGGAGAAACAAGAAAAAGGAAACTCCTTTTTCAAATGCTTTCACGACTGGGCTTGAACTGCACTCAGTAA


Promoter Sequence:
>Vu_20404::LG5:22578944-22580944(+)
ACTCTATTTGTAGAATTGGCTTATGAACTTCCAATGTTTTTTTTTACTTGGAACATTTTGGTACTTTGATGTAATTATTTTGTTATGTTAATTTAATTGAATAAAATGTTTGTCAATATTTTTGGTGTCATAATTTTTTTTTTATATTTTAAATTGTCATTATTAAAAGTAAATTTTATTGAATTACAAACCTATAAATATAGGTGAATAATAATTTTAAATTATGACAATTGATAATAATGACAATTATAAACATTATAATATAACGTGAATAATGACATTTTCATGTGATTTGATTTTTGCTTAAAAAATTACGGTAGTTTTAATTACTGTTATTTATTCAAGAAACCACCATTTTGTACAATGTAATAAATGACCGTTGTTGCGTGTCATATTATATTTTATAACGGTTTTCAAACCCGTCACAAGCATAATATGTGATGGTTAAAACTGTCACATTATATGAAAATAGTTGCTGTAATTTACATAATTTTTTGTAGTGTTCGTTAATAGCACATACGTTCTTGTTGTCATCAATGCTTGGTATTGTTGTTGGGATAATCTGAAATTTTGGCCGCCGAACTCTGCGCAGAATCACTTTGTTTCTTGTTTAGTCTCAACATTATTGATAGAATTATTTTTAAAGAACTTGTGTACAGGTGGGTAACCGTGCTTTTCGTAGCAAATGTAAGCAATGTGACCATTTCTTCCAGTATGTGCAAACTTTCTTCTTGTTAAAGTTTCTTGCATTCTTGTTTTCAAAGTTTTGAGGATCCATTTTTCTTGTAGCAATTGGCTCCAGAATGACCACTCTAGCCACAGAAAGTGCATTTATTCGAAGCAATGACATTAATTTTCGAATCCACTAACGTAAAGAAATTATTCCCAATGATCTCTACCTTGTTGAGAGACAAAAGAGAAAATTTTGGAGAGTGGTGAATGGGTTCAATAAGAAGCACATGATACCTTATATTGTTGTATTGATCATTCAGCCCCCTTAAAAATTGCATAACCTGATCTTCAGTTTTCCTCTGAGCAATTTGAGACGCCATCTGACAGGAGCACTTGGTGGAGCAACTGCACGTGGGATAAGGTCGAAAATTATCCAATTCAGCCCAATAGTTCTTAATTTCATAAAGAAACCTGTGGCAGTAAGATCTCCTTGTTTTAGGCCCTGTTCTCTTGAGTGGATTTGAGGGAATGGATTTGAGGGGATTTGAGAGGATTTGAAGATAATTTTTTTTATCGTTTTTTTGAGTAAATTTAGAGGTAAATGAGAGTGAATTTAAAAATAAATTTTTTTAATATGTCATGTCAATACAATTCTATACTAATTCTCATAAATTTTATTTTTAAATTCACTCTCATTTACCTCCAAATTCGCTCAAAAAAACGATAAAAAAAATTATTTTCAAATCCTCTCAAATCCCCTCAAATCCATTCCCTCAAATCCACTCAAGAGAACAGGGCCTTAATGATGATGCTTCCATGTGTAGCTCCGAAATTCTCTGAAGATTTCCTAATGTTCATTGCTGTATTGAACATGAAACAAATGAAGCTTTGTTGCCATAGTAGTCCTACTTTACTCAAGTGTCCATTAATTTATTTAACATTTTAATTAAAAAGAATAAACACTTCTTAAAAATATCATGCAGAAAAATGAATTATTAAAAAACTAAAATACGAAAATGAGAATTTTAGATCTCTCTTAATCTATTTAACGTTTTAATTAAAATATTCAAAATAAACATGGTAATAAATCTAAAATACTCCAGACTTAAACTCAATTGGTTGACTGTCATAAGATAAACACCGAAACATAAGCAACTAAAAGTAACACTTAGTCTTAAACCGTGACAAAAAAGTTGACTTTGAGAGACATAAACTCAATTGACTGACTGACTTATCATAAGACTATACATGTGTCATAGACATGGAGGCACATTCCTCACTGACATAAACTTCTATACCAGCAACTTTCTGCTCTTTTACTAAGAACA


Gene Sequence:
>Vu_20404(+)
ATGGCTGAATATTTTGTCTTCGAGATTGCTGAATCACTGCTGGAGAAGCTTGCATCTAATCTTTATGAACAAGTTTCTCGAGCCTTTGATCTGTATGACGATGCGCAAAGTTTCAGAGACACCTTGTCAATAATAAAAGACGTTCTCTTGGATGCTGAGGAAAAGAAGGAGAAGAAGCATGGATTGCGTGAATGGCTCAGGCAGATTCGAAACGTATGCTTAGATGCTGAAGATGTGTTGGATGGATTTGAGTGCCAAAACCTCAGAAAACAAGTTCTCAAAGCTTCCGGCACCACCAGGATGAAGGTAAACCACTTCTTTTCTTCATCTAATTCTCTTGTTTTCCGTTTTAGGATGGCCAGGCAAATAAAAAATGTTACACGTAGATTGGATAAGATAGCAGCTGACGGGAGCAAGTTTGGTCTTGAGAGGATTGTTATGGATCACAGCCCTCTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCTGGGGTGATAGGAAGGGATAAGGATAAGGAAGAAATTATCAAGATTTCGATGCAACCTCATCCTAATGGTGCTGGTTATGGAGATCAAAGTGTTTGTATTATTCCCATAGTGGGTATTGGAGGGTTGGGAAAGACCACACTTGCAAAGTTGGTGTTCAATGATAACAGAATGGATTATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACATAAGGCAGATACTTATTAAAATCATCAACTCTGCTACTGATCCAACCATTTCCGTGTTTCCTCAAGAAAGCATAAACAACTTAGATATTGAGCAGTTACAAAGTCGTCTTAGACACAGACTTTCTTGTCAGAAGTATCTACTAGTCTTGGATGACGTATGGAATAATAATCGAGCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTGGGTGCAGTAGGAAGCAAAATCTTGGTGACAACAAGAAGTACCTCAATTGCTTCAATGATGGGCACTGTTCCCTCGTATGTTTTAGAAGGTCTTTCTGTGGAGAATTGCTTATCTCTGTTTCTGAAATGGGCATTTAGGGAAGGTGAAGAAAAAGAACATCCATATCTAGTGGATATTGGAAAAGAAATAGTGAAAAAGTGCCGAGGGGTTCCACTAGCACTGAAAACTTCAGGAAGTTCCCTGTTCTCAATTTTTGATTTAGAAAGATGGGAAATTTTGAGAGACCATGAGCTATGGAACCGAAAACAACAGAAAGATGACATTTTACCTTCCCTAAAGTTGAGCTATGATCAAATGCCATCCTATCTGAGGCACTGTTTTGCTTTCTTTTCTCTTTATCCAAAAGATTTTGGTTTTACCTGTGCTGAAATTGCCAACTTCTGGGCCACACTCGGATTACTTCGATCTCCATTTGGAAGTCAGAAGATAGAGAATGTTGGAAAACTGTATATAAATGAGTTATATTCAAGATCATTTCTGGAGGACTTTGGCACAGTTTACTATTTTAAACTACATGATTTGGTACATGATCTTTCGCTGTATGTTGCGAAAGAGGAGTTTCTAATGGTGAACTCCCACACTCGCAGTATACCAGAGCAAGTAAGGGATATATCAGTTGTTGAGAATGATTCACTAAGGCATACTGTGTTCCCCAAGTCCAGAGGTGTGAGAACTATAATATTTCCCGTTGATGGAGTGGGTGTTGGCAGTGAATCCCTTTTGGAAACTTGGATAAAAAGATACAAATACTTACGGCATTTAAATTTAAGTAATTCCTCTTTTGCGACACTTCCTAATTCAATTGCTAAATTGGAGCATCTGCGAGCTCTCATTCTTGACAAGAAATTCAAAATAAAAAGACTTCCTAATTCTATTTGCAGACTCCAAAACTTACAAAAGTTGTCTTTGAGAAGATGCTTGGGGCTTGAAACATTGCCTAAACGATTAGGAATGTTAATCAGCCTCCGAAAATTGTATATAACCACAAAACAGTCTATTTTGTCCGAGGATGAATTTGCAAGTTTGAACCATCTTCATACTTTGGTTTTTGAATACTGTGACGATTTGAAGTTTTTGTTCCGAGGGGCACAAGCACAACTCCCGTCCCTTGAGGTTTTGATCATTCAATCATGTGGGAAGCTGGAGTGCTTACCTTTCCATATTCTCCCTAAACTTGAGGTTCTGATAGTAACAAGGTGCTTGATGCTAATTCTGTCCTTGAACAGCGAAATACCAATCCAAAGATTGAAGATGAAATATTTGCATATTGAGCAATGTCCACAGCAATTGGCGCTGCCCGAATGGATTAAAGCAGCGTCCAACACTTTGAGAACATTGTCAATTTTAAATTGTCATTGTCTTGAGATGCTTCCCGAGTGGCTTAGCACAATGACACGTCTTAAGATGCTTCATATTGTTAACTGTCCTCAGTTGTTTCATCTGCCATGTGACATGCATTGTCTAAGAGCCCTTGAAGATTTGATCATTGATGGTTGTCCTGAATTGGGTAGAAAATGTGAACCTCATTCTGGTGAGCACTGGCCCTTCATCGCTCACATCAAATGTGTTTCCATTGGAGAAACAAGAAAAAGGAAACTCCTTTTTCAAATGCTTTCACGACTGGGCTTGAACTGCACTCAGTAA