Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20020 LG5 16936769 16938541 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 16936813 intron_variant
G/C 16936888 intron_variant
T/C 16936924 intron_variant
G/A 16936958 missense_variant p.Val12Ile
C/A 16937003 missense_variant p.Pro27Thr
T/A 16937511 intron_variant
A/G 16937568 intron_variant
T/C 16937569 intron_variant
G/T 16937973 missense_variant p.Ala144Ser
A/T 16937999 synonymous_variant p.Ala152Ala
C/A 16938112 missense_variant p.Thr190Lys
T/C 16938124 missense_variant p.Leu194Ser
A/G 16938265 missense_variant p.His241Arg
A/G 16938277 missense_variant p.Glu245Gly
T/C 16938287 synonymous_variant p.His248His
G/A 16938302 synonymous_variant p.Ser253Ser
T/G 16938474 3_prime_UTR_variant
T/A 16938527 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20020.1
MMGARTTEEPFVELNKVDRRHGKRPLPSDHASRENREGFNFPSQQGEEASSFPFLQQPINTADDSTPSTPVPQYAQIPTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAAAYDAAALKFKGSKAKLNFPEHVLLASIPPSPSTQNININTNNSYASFSSPLTPTPLPPVYQPQPLLSPSQEEAFPNLMQYAQLLWSRDDDDLQRVASGLHHHHHPTESFHGSSSSTMFSFSSTSVVTESDQQIGGDAGDSKEGEYYGSCFSRGSDFHGKN*


CDS Sequence:
>Vu_20020.1
ATGATGGGGGCAAGAACAACAGAAGAACCTTTCGTAGAGTTGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGATCATGCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGGGGAAGAAGCTTCTTCATTCCCCTTTCTTCAACAACCAATCAATACTGCTGATGATAGCACCCCTTCCACACCAGTTCCACAATATGCCCAAATACCCACTTCTACCTTGATTGAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGGCGAAAAAGACACTATCGTGGAGTTCGACAGAGACCATGGGGGAAATGGGCTGCCGAAATCCGTGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACTTTTGACACGGCAGAGGCTGCAGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTTAAAGGATCCAAAGCAAAGCTCAATTTCCCAGAACACGTTCTTCTTGCTTCAATACCACCTTCACCTTCCACTCAAAACATAAACATTAACACCAATAACAGTTATGCTTCTTTTTCTTCACCTCTTACACCAACACCTTTACCACCAGTTTATCAGCCACAACCCTTGTTATCACCATCACAGGAAGAAGCGTTTCCAAATCTAATGCAGTACGCACAGCTTCTTTGGAGTAGGGATGATGATGATCTACAACGTGTTGCTTCAGGCCTTCACCATCATCATCATCCCACTGAGTCTTTCCATGGTTCCAGTTCTTCGACTATGTTCTCTTTCTCGTCCACTTCTGTTGTGACCGAGTCTGATCAACAGATTGGAGGTGACGCCGGTGACTCCAAGGAGGGAGAGTATTATGGTTCTTGCTTTTCTAGAGGGAGTGATTTTCACGGCAAGAATTGA


Promoter Sequence:
>Vu_20020::LG5:16934769-16936769(+)
TCGACGATATTCTTCATAAGACACTTTCGCTTATAACATTATTTTTAGATGTACAACATTAAGCTTTATGATTATCAAGAAAGATGTTTCAATTAGAGAGTTTGAGAACCCATCTTATTTTTATGCACATATCTCTTAGACGATACTTTTGCAAAATGTTTTTCTTTTCAACACTTTATGAATAGAAATCCTTACGCATATTTGTCACAATAGGTTTATGTAAGCTTTTCTTATTGATCGGACAATTTTTGTCAAAGGTATTCAACTTAACTCCCAAAATCAAAATAAGTTAAGATGATGTCTCTAAAAAAAACTAACTAGAAGATTTAAAGATTAAAATATAAAAGAAAACTTGAAACAAGCTAAACGCTATCTGTCTAAGAAAAGACAAAAACACAAAAGAAGACTTTACTAGGCTAAATAATATCATGAGCTTAAACAATACTCTGTCCAACAATGAAGTCTTTATACAAAATTTGGTATCTTTAGAAAAAAAGCTTAATTGTTAAAAGCTACCTAATAGTAGGAAATGAAAAAAACACATTTTTGTTTTGAACAAGCATTTAGTGACATTAAATGCTCAATGCCCAAAAACAACAAAATCCAATCCAATTAGTAGTAGGTAATAAGAAAGACATTCACCAAATGACATTCCTCTAGAAAATAGTGACAATACCTATGTCAAAACAAATCATAAAATCAAAAGTAAAACACCAACCAATAAGTCTCTTACAAACTATACAACACCAACTAATCTCATAAACACAAAAACATTAGAAAACACAAAAACCTAAACAAATGATGAAAACATTTAATGCACTAAAGTAAATAAAAATAGGACATACTTGTTATACATGCTTCTATCTTATGCAGGACAATTGCTATAAACGTTCATTTATCTCATCTTATAAGTATACAAAATGAATGTTGAAAGAAAAAAGACAAAAGAAGACTGATCATATTATCAAAAGCCGTGCCAAAAAGATAAGTCAACTGTTGTGGATAAGAGCTCCAAAAAGCAGGTATGTTCTGACAAAAGACTTCATCCTATGATAGACATCTATACCTATAGCCAAAAAAGACCATATATCAAAACAACCTTCGACAAATGGTCATATTATCAAATCTCAAGGCAAACATCGTCATAATGACTATATCATCAAGGTTTATAAATAAAAGACAAAGAGAAACAAGAAGAAGATGATGAAGAAGAGAGAAACTTTTAAGATATAAAGATATCTCATCATCCATTGAGTAAGGAAATCTCTTTGAGCTATTAAATCAAAATTCCTCAAATGAAGAGAAGAGTTTAAGAAGAAAAAGATGCTCTCAAGCTTTATCAGAACATCCACTTATAAGAAGAGAGAGTGAAAGAGCGAAACAAAGGAATGTGAAGACAAAATCATCTATGGGCCTAAATGCTCTCATGTTTTGTTTTAATCAAATTAGCCTTCCATGCTAACTATTGTTATTGTTATTTTGGATAATTTTTAGGTTTTTTTGTCGACTTTTATTTCAAAGTTGAACTCACGTTAGACATCAATTAGTGTTTATTTTTGCCTTCTTGTATCCTCTTTTTATTTACGATATTTTTCATTATTTTTCAGTTATTTTCTGTTAAGTTCAGAACTTTTACTATATGTAAATTTTTAAAAAATAAAAAACATTAGAAAAGCTAAATGAATGACTAAAATTTAATATATAATTACATTTTTAGCTGTAAATTAACTTCAATCTATGTAATTGTGAAAACAACAAATTGTAAATATGGATTACATCGAAATAAAGATTTTAAAATACGAAAACCAAAAAAATAAAACAAAGGAACCTAATTGCTCTTCCTTCTTTGAACTAACAAAACTCACCAGCTCTTTTTCTCTCTCATATTTCCAATGGAGAAATAAACCCTATCTCAAAGTAACAAGCAAGGTGGTTATCTTTTGCTTTTTCCCTTCTAGTAAATATTCGTTCTTTTTAAGTCCTCTTTGATATTTAAAAGA


Gene Sequence:
>Vu_20020(+)
ATGATGGGGGCAAGAGTATCCTTCTTTTGATATTGGTTTCATTCGTATTCCATCACTCTTCTCTATAAGAAATTCTAGATCTGCTTTATAAGAAGGCATATATATAGCTGCAAGGTTCTGAGCAAGAGTGAGAAAAGAGGTTAATGAATTTAGTGTGTTGATAGATAAAAGACAACAGAAGAACCTTTCGTAGAGTTGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGATCATGCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGGGGAAGAAGCTTCTTCATTCCCCTTTCTTCAACAACCAATCAATACTGCTGATGATAGCACCCCTTCCACACCAGTTCCACAATATGCCCAAATACCCACTTCTACCTTGATTGAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGTACAAAATTTCCCAGGTTCATGCACTAACTTTATATTTTTCAATTTATATATTCCTCTATGTCATACTATGCAACCCTATTTGTCAAAGATTTCACCAGGATCACTTTCTTTTCTCCTTTTTCAACTCCAGACATATTTATATAGAACTAGATTCTAACAGAGATCTACTTATTTAAATGGGGTTTCAAGATATTTATGATTTTTTTTTCATCACTAGCATGAGTGCAATTTCCAAATCTGAATTGAAAAAAGGAAAAATCAAATGGGGACATGTCTTCTGTTTCTCTAAAAAGGTTGTTGGTTTGATGCACATGTAAAATATGTGTTTTAAACTTGCAAAGATAAACCAGTTGAAATGACACTCTAACACTCCCTTTATCTATCGATCTTGATCCCTTGAATGTTATTATACAAGGTTGGTGTCTATCTTGTTATAATGATGTTGATTGTGGGGACAAGAAGTTAGGTATTTTCAGTGAGCAATATTTTCCATTGGTACTTTAATTTCTTAGGGTGGCTATAGTTGATGACAAATTGGACCAAACCAAAACTGTGTGCCTAACCAAAGCGTTGTTGTGATTGATATTGTTGTTGCTGCTTTGTGCAATAATTGAAAGGGCGAAAAAGACACTATCGTGGAGTTCGACAGAGACCATGGGGGAAATGGGCTGCCGAAATCCGTGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACTTTTGACACGGCAGAGGCTGCAGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTTAAAGGATCCAAAGCAAAGCTCAATTTCCCAGAACACGTTCTTCTTGCTTCAATACCACCTTCACCTTCCACTCAAAACATAAACATTAACACCAATAACAGTTATGCTTCTTTTTCTTCACCTCTTACACCAACACCTTTACCACCAGTTTATCAGCCACAACCCTTGTTATCACCATCACAGGAAGAAGCGTTTCCAAATCTAATGCAGTACGCACAGCTTCTTTGGAGTAGGGATGATGATGATCTACAACGTGTTGCTTCAGGCCTTCACCATCATCATCATCCCACTGAGTCTTTCCATGGTTCCAGTTCTTCGACTATGTTCTCTTTCTCGTCCACTTCTGTTGTGACCGAGTCTGATCAACAGATTGGAGGTGACGCCGGTGACTCCAAGGAGGGAGAGTATTATGGTTCTTGCTTTTCTAGAGGGAGTGATTTTCACGGCAAGAATTGAACACAATGTTAAGTGTAAGTACTATGCTGTGTGTTGAAAACCTAGCTACCTTTTCTGTCTATTGGTTTCATATTTCAAATAATGGTTTTTTCGCTTCAGGT