Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19933 LG5 15247211 15249274 PREDICTED: DELLA protein RGL1-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 15247363 synonymous_variant p.Pro51Pro
A/T 15247614 missense_variant p.His135Leu
A/C 15247708 synonymous_variant p.Ile166Ile
A/T 15247713 missense_variant p.Glu168Val
G/T 15248005 synonymous_variant p.Leu265Leu
T/A 15248409 missense_variant p.Val366Asp
A/G 15248414 missense_variant p.Lys368Glu
A/G 15248416 synonymous_variant p.Lys368Lys
C/A 15248626 synonymous_variant p.Pro438Pro
C/G 15248637 missense_variant p.Ala442Gly
A/T 15248716 missense_variant p.Glu468Asp
C/T 15248911 synonymous_variant p.Gly533Gly
A/T 15248995 synonymous_variant p.Ala561Ala
T/A 15249013 synonymous_variant p.Ile567Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19933.1
MINSLCGTLKSENNSRTKLQATSSNESKKNATQSSGDLDQTGLTPPSLNLPSLKFDLDGDVEVQSPDSSMWESFFADQLDADFMISSPVRNVPSPQLSSYNCSYNYAHGMQGQSLSGCSPPKFSSSHVGAFNSSHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGYSSTKVSSDIATSSECFDLSTQIPSSILDTLTLPDSSRYHGSVDEECGGSSQLYQESDIYHHMGSMASASLSQALQQERYQEKRQKQQALHQQQQRQQDSLMVPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSARLNATLSPKPSKSLSPSNSMEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPTTAPFLRITGVGPSLDAVRETGRCLTELAHSLRIPFEFHAVGEQLEDLKPHMLHRRVGEALAVNAVNRLHRVPGNHLGNLLTMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSAQRAKVEQYIFAPEIRNIVSCEGPERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCEGYRLTEDKGCLLLGWQDRAIVAASAWRC*


CDS Sequence:
>Vu_19933.1
ATGATCAATTCACTTTGTGGAACCCTAAAGAGTGAGAACAACTCTAGAACCAAACTCCAAGCCACATCTTCAAATGAGTCAAAGAAAAATGCCACTCAATCATCTGGTGATCTTGACCAAACTGGCCTAACCCCACCAAGCTTAAACCTTCCTTCACTAAAATTTGACTTGGATGGAGATGTAGAAGTTCAGTCACCAGATAGTTCAATGTGGGAATCCTTTTTCGCTGACCAACTAGATGCTGATTTCATGATCTCTTCCCCAGTCAGGAACGTTCCCTCTCCGCAACTCTCTTCTTACAATTGCAGCTACAACTATGCTCATGGAATGCAAGGTCAGAGTCTCTCAGGGTGTTCCCCACCAAAGTTTTCATCTTCCCATGTTGGAGCCTTCAACAGCAGCCACAAAGGGAAAGGACTTAGCCCTCTTCACAGGGTCTTCAACTCACCAAACAATCAGTACATGCAGCATGTTGAAAACCTTTCCCTTCCAGCAATAGAAGAGTTCTTGGAAGACTATCAAGGCTATTCATCAACCAAGGTGTCTTCTGACATTGCAACTTCATCTGAATGCTTTGACTTGTCTACTCAAATCCCTTCATCCATATTGGATACCTTAACACTGCCCGATTCCTCAAGGTACCACGGTTCAGTCGATGAAGAATGTGGTGGCTCTTCTCAACTGTACCAAGAGAGTGACATCTATCATCATATGGGGTCCATGGCTAGTGCTTCCCTCTCACAGGCTCTACAACAAGAACGCTACCAAGAGAAACGGCAAAAGCAGCAAGCACTGCATCAACAACAACAACGCCAGCAAGACAGTCTCATGGTGCCTATTCCAATCGGAATCGAGCAGGAGCAAGACAGCGGCCTTCAACTGGTGCACCTGCTTCTGGCCTGCGCAGAGGCTGTGGCGAAAGAGGAATACATGTTAGCAAGAAGGTACCTCCACCACCTCAACCGAGTCGTCACTCCCTTAGGCGACTCCATGCAGCGCGTGGCGGCATGCTTCACCGATTCGCTCAGCGCCAGGCTCAATGCCACCCTCAGCCCGAAACCCTCCAAATCCCTCAGCCCCTCAAATTCCATGGAAGTCCTCAAAATCTACCAGATCGTGTACCAGGCCTGCCCTTACGTCAAGTTCGCCCATTTCACCGCCAACCAGGCCATCTTCGAAGCCTTCGAGACCGAGGAGCGTGTTCACGTCATCGACCTCGACATCCTCCAGGGCTACCAATGGCCCGCCTTCATGCAGGCCCTCGCCGCCCGCCCCACCACCGCTCCCTTCCTCCGCATTACCGGAGTTGGTCCCTCTCTCGACGCCGTCCGCGAAACCGGCCGCTGCCTTACCGAGCTCGCCCACTCCCTGCGCATCCCCTTTGAATTCCACGCCGTCGGAGAACAGCTCGAGGATCTCAAACCCCACATGCTGCACCGCCGTGTGGGGGAGGCTCTCGCTGTAAATGCAGTCAACCGCCTCCATCGCGTCCCCGGGAATCATCTGGGGAACCTTCTCACCATGATACGCGACCAGGCACCGAACATAGTGACCCTGGTGGAGCAAGAGGCGAGCCACAACGGACCCTACTTTCTGGGCCGGTTTCTCGAGGCGTTGCACTACTACTCGGCGATCTTCGACTCGCTGGACGCAACGTTTCCGGCGGATTCGGCACAGCGGGCAAAGGTGGAGCAGTACATTTTCGCGCCGGAGATACGGAACATCGTATCGTGCGAGGGCCCGGAGAGATTTGAGCGGCACGAGAGGCTGGAGAAGTGGCGGAAGATAATGGAAGGAAAGGGGTTCAAGGGCGTGGCACTGAGTCCAAACGCGGTGACTCAGTCGAAGATTTTGCTCGGGTTGTACTCGTGCGAAGGGTATAGGTTGACGGAGGATAAGGGCTGCTTACTGCTTGGGTGGCAGGATAGGGCCATCGTTGCGGCGTCTGCATGGCGGTGTTGA


Promoter Sequence:
>Vu_19933::LG5:15245211-15247211(+)
ATGTAAAATGTTATGTGAGTGTCAAAAATCCTAAGTTATAATTGACTAAAAATTTTCAAACAATTTTTTAAAAAATACAAACAAATAATTGATGGAGAATAACATTTATTTAAGCATTGTAAAAAAAAAGGACAAAAAGTACAAAAAAAATATCAATCAAAATAATCAAGTTCACGTCCATCAAAAGTAGACAATAAAATTCAAATCAATATTGAACAAAAAAAATAGTGATTTAAAACAATAATATAATAATTTAGATAAAACAACACTCCTATCAACATCAATAAACAAAAATCCTAATTGACATAAGAGTGATACTCCTTCCACCACCCCATCTTCTCCCTCCACCTTCCCAATTTTTTTTAAATTCTAAATTTATCCTTTTTACTTTTTACTTTTACCAATTTTACTTTTTATTTTCTAAAACCCTAATCTCAATCCCTTTCATTTTCACTTTCCCTTTCACTCTCAGCAGCAAGTCTCCACCCTCTAGTGTCACTTTTTCTCTTTCTCTTAATTCACACTCCCGTTAACACAAAATTTGACAGAAAAAGAAAATTCTGCATGGTATAAATTTAAAACATTTATAACTTCTGATGAATTTTGAAATATTATGATTCCATAATATAATCTGCTAAAAATTTCTTCTCCACTTCTTTGTCTTTAAATAACCAAACTTGAAAATCTATGCTTAAAATTACATTTGTGCTTACAATGGTGCAATGAAAGAGAAATATGTTTGTTGAGTACAAAATAAAAAGTAAATAAAAGAAAAAATAGTTAGTTCAGTTTATCTTCTTCTCTTCCTGTCAAATTTTGTGTTAACGGAAGTGGAAATTAAGAGAAAGAGAGAAAGTGAAAGTGACAATGGAGGATGGGGGTTTGCGGTTGAGAGTGAAAGAGAAAGTGAAAATGAGAGGGGATCGAGATTAGGATTTTAAAAATTAAAAAGTAAAATTGGTAAAAGTAAAAAATAAAAAGGGTAAATTTAGAATTTAAAAAAAATTGGAGAGGTGTAGAAAGAAGACGGGGGTGGTGGAGGAGCATCACTCTTGACATCAACATAAAAGTATGAATGTTAACTTTGTTTCGGTTTAAATCTTGTTTGAAAATTTTCATATAAAAACCGACTTAAAGAGAGAATATAAAAAAAAGATACGGTAATTTAAAACTACAAAGATTTTGAGATAAAATGTTAAATTTCTAATCTAAAAAACATATACTATTCTAAAATATTTCAAATTAAAGTAATCAAAGTATATAATCCTATGAATATAGCATTTAACTGCTTATTCTTTTATTCATATACAACATGCACTGCTTTTGTTAAAAACTGTGTTGAAAAATCCGATTGATAACTTATATGAAAGCCAGTGTAGATAATAAAGTTACTACGTAAAACAAATAAGATTATAATATTTAAATTATAAAATAGTTTTTAACTATTTGAATAAAATAATGAATAGTATGAAGATATTACTTATTACTGCTATGCTATAGTTTTATTTAATTGTAAAGGTAACCTTGTTGTTTATGATAGGTCTTTGTTTTATGTTTTTATAAGATTATGAACCGATGCTTCCAATGATTGTGCAGGTGAGTATAAAAGGAACCTTGTAGATATATGGGCCGGCCCAAAGAAAGTGGGGCCCTCCGAAGAATTTGTCTTCTACGGTAATCACAAGTATTCCAAAGCCTTGTGGTAAACATTTATAAAGGTTGGCAAAAATGACAAAAATTAGGCCTCTGAAAATCCACCAAAGACAAACCTCCAATCACAAATTATTGGTATTCGGTGTTGTCTTTTCTGCCCTATTTCTCTCAATAAGAAGGAAGAAATTTGAGACTTCGCTCTTTCCATAAACCATCCATTCTCTATAGCTACTACCTCATACCATTTAGACACAAATAGAAAAAGCAAAAGGGGTAGTTTCAAATAATTATAGTTTTCGTTGTGAGAATCCTAGATACTGAAACAATTGGGAGGGAGGTGAAGAAAA


Gene Sequence:
>Vu_19933(+)
ATGATCAATTCACTTTGTGGAACCCTAAAGAGTGAGAACAACTCTAGAACCAAACTCCAAGCCACATCTTCAAATGAGTCAAAGAAAAATGCCACTCAATCATCTGGTGATCTTGACCAAACTGGCCTAACCCCACCAAGCTTAAACCTTCCTTCACTAAAATTTGACTTGGATGGAGATGTAGAAGTTCAGTCACCAGATAGTTCAATGTGGGAATCCTTTTTCGCTGACCAACTAGATGCTGATTTCATGATCTCTTCCCCAGTCAGGAACGTTCCCTCTCCGCAACTCTCTTCTTACAATTGCAGCTACAACTATGCTCATGGAATGCAAGGTCAGAGTCTCTCAGGGTGTTCCCCACCAAAGTTTTCATCTTCCCATGTTGGAGCCTTCAACAGCAGCCACAAAGGGAAAGGACTTAGCCCTCTTCACAGGGTCTTCAACTCACCAAACAATCAGTACATGCAGCATGTTGAAAACCTTTCCCTTCCAGCAATAGAAGAGTTCTTGGAAGACTATCAAGGCTATTCATCAACCAAGGTGTCTTCTGACATTGCAACTTCATCTGAATGCTTTGACTTGTCTACTCAAATCCCTTCATCCATATTGGATACCTTAACACTGCCCGATTCCTCAAGGTACCACGGTTCAGTCGATGAAGAATGTGGTGGCTCTTCTCAACTGTACCAAGAGAGTGACATCTATCATCATATGGGGTCCATGGCTAGTGCTTCCCTCTCACAGGCTCTACAACAAGAACGCTACCAAGAGAAACGGCAAAAGCAGCAAGCACTGCATCAACAACAACAACGCCAGCAAGACAGTCTCATGGTGCCTATTCCAATCGGAATCGAGCAGGTAACAAAATCTTCCCTCACCCCCACTTCATCAAAACTGATCATGTGTTGGAAAACAAGTGGATTGTGACGCTCTTCTTCTTTTGGGATATCAACGTTACAGGAGCAAGACAGCGGCCTTCAACTGGTGCACCTGCTTCTGGCCTGCGCAGAGGCTGTGGCGAAAGAGGAATACATGTTAGCAAGAAGGTACCTCCACCACCTCAACCGAGTCGTCACTCCCTTAGGCGACTCCATGCAGCGCGTGGCGGCATGCTTCACCGATTCGCTCAGCGCCAGGCTCAATGCCACCCTCAGCCCGAAACCCTCCAAATCCCTCAGCCCCTCAAATTCCATGGAAGTCCTCAAAATCTACCAGATCGTGTACCAGGCCTGCCCTTACGTCAAGTTCGCCCATTTCACCGCCAACCAGGCCATCTTCGAAGCCTTCGAGACCGAGGAGCGTGTTCACGTCATCGACCTCGACATCCTCCAGGGCTACCAATGGCCCGCCTTCATGCAGGCCCTCGCCGCCCGCCCCACCACCGCTCCCTTCCTCCGCATTACCGGAGTTGGTCCCTCTCTCGACGCCGTCCGCGAAACCGGCCGCTGCCTTACCGAGCTCGCCCACTCCCTGCGCATCCCCTTTGAATTCCACGCCGTCGGAGAACAGCTCGAGGATCTCAAACCCCACATGCTGCACCGCCGTGTGGGGGAGGCTCTCGCTGTAAATGCAGTCAACCGCCTCCATCGCGTCCCCGGGAATCATCTGGGGAACCTTCTCACCATGATACGCGACCAGGCACCGAACATAGTGACCCTGGTGGAGCAAGAGGCGAGCCACAACGGACCCTACTTTCTGGGCCGGTTTCTCGAGGCGTTGCACTACTACTCGGCGATCTTCGACTCGCTGGACGCAACGTTTCCGGCGGATTCGGCACAGCGGGCAAAGGTGGAGCAGTACATTTTCGCGCCGGAGATACGGAACATCGTATCGTGCGAGGGCCCGGAGAGATTTGAGCGGCACGAGAGGCTGGAGAAGTGGCGGAAGATAATGGAAGGAAAGGGGTTCAAGGGCGTGGCACTGAGTCCAAACGCGGTGACTCAGTCGAAGATTTTGCTCGGGTTGTACTCGTGCGAAGGGTATAGGTTGACGGAGGATAAGGGCTGCTTACTGCTTGGGTGGCAGGATAGGGCCATCGTTGCGGCGTCTGCATGGCGGTGTTGA