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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19775 LG5 12596234 12598780 PREDICTED: probable inactive receptor kinase At2g26730
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 12597665 intron_variant
C/G 12597668 intron_variant
A/G 12597908 intron_variant
T/A 12598094 intron_variant
G/C 12598095 intron_variant
T/A 12598143 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19775.1
MKRPSTSIAFATFLFLLNTTSCVEYEVKRTLIQFLGQVSGKDGQQNSSLVWKQDSDPCKGTWQGVHCDAQNMSIKKLLLDNLNFSGTLDLAMLCNLQPLAASLTYLSLDGNKISGGMASEVGNCKQLTRLHLSGNQLAGDLPSSLAMLSSLKRLDISNNQFSGSLPDLYRISGLNMFLAQNNYLGGTIPAFEFSNFDQFNVSFNNFRGHIPNVHGYFSADSFLGNPELCGDPLPKNCSDKPMPLSEAQTSEKSKGASKEQILMYSGYAALGVIIVLFVVLKLCRRKKGENKVEALNNRVGASGGGDVEKPRNVSSEYKNEVSRSEFSVPSESGMVSQSLVVLSSQAAMELRLEDLLGAPAELIGRGKNGSLYKVMLDNGMMVVVKRIKDWTISSHDFKQRMRILSQAKHPRVLSPLAFYSSKQDKLLVYEYHQNGSLFKLLHGTTKALDWTSRLGIAATIAEALAFLHQEIGHHGIAHGNLKSSNILLNKNMEPCISECGIMDMDDQRGSAFGSSSTDGGASDMLKGDVYGFGVIVLELLTGKLVKGNGIDLTDWVQSVVREEWTGEVFDKSLLSEYASEERMVNLLQVAIRCVNPSPQVRPTMNQVALMINTIKEEDEKSLIYEV*


CDS Sequence:
>Vu_19775.1
ATGAAAAGACCTTCTACATCGATAGCATTTGCCACATTCCTTTTCCTCCTAAACACGACCAGTTGTGTAGAGTACGAGGTCAAGAGAACACTGATACAATTTCTGGGACAAGTCTCTGGAAAAGATGGCCAACAGAACTCCAGTTTGGTATGGAAACAAGACTCTGATCCCTGCAAGGGCACCTGGCAAGGTGTACACTGCGATGCTCAAAACATGTCCATAAAGAAGTTGCTACTTGATAACCTCAATTTCTCTGGAACACTTGATCTTGCTATGCTTTGCAACTTGCAGCCCCTGGCTGCATCTCTCACATATCTTAGCCTTGATGGCAACAAAATCAGTGGAGGGATGGCCTCTGAGGTTGGAAATTGCAAACAACTCACTCGCCTGCACCTAAGCGGAAACCAACTTGCTGGAGACCTTCCTAGTTCACTTGCTATGCTGAGCAGTCTGAAGAGATTGGACATTTCAAATAACCAGTTTTCAGGATCTTTACCAGACTTGTATAGAATCTCAGGGCTGAACATGTTCCTCGCACAGAACAATTACCTTGGAGGAACTATACCTGCTTTTGAGTTCTCTAATTTTGACCAATTCAATGTCTCCTTCAACAATTTCCGTGGCCATATTCCAAACGTGCATGGCTATTTCTCTGCCGACAGCTTTCTTGGTAATCCTGAACTATGTGGAGATCCACTGCCAAAGAATTGCTCTGATAAGCCTATGCCTTTGAGTGAGGCTCAGACATCAGAAAAATCAAAGGGTGCTTCCAAGGAGCAGATTCTTATGTACTCAGGGTATGCTGCATTGGGTGTCATCATTGTCCTTTTCGTAGTCTTAAAGCTGTGTAGAAGAAAGAAGGGAGAGAATAAAGTTGAAGCATTGAATAATAGGGTAGGGGCCAGTGGAGGTGGTGATGTTGAAAAGCCGAGAAATGTTTCAAGTGAATACAAAAATGAGGTAAGCAGATCTGAGTTTTCAGTCCCTTCTGAAAGTGGGATGGTTTCACAATCACTGGTGGTTCTTTCGAGCCAAGCGGCAATGGAACTGAGATTGGAGGACTTGTTGGGAGCACCTGCAGAACTTATTGGAAGAGGAAAAAATGGAAGTCTTTATAAGGTGATGCTTGACAATGGGATGATGGTAGTTGTGAAAAGGATCAAGGATTGGACTATTTCAAGCCACGATTTCAAACAAAGAATGCGAATACTTAGCCAAGCAAAGCACCCTCGTGTCCTTTCACCACTTGCTTTCTATTCTTCTAAACAAGACAAGCTTTTGGTGTATGAATATCACCAGAATGGCAGTTTATTCAAGCTCCTACATGGTACTACAAAAGCCTTAGACTGGACCAGCAGACTTGGGATTGCAGCAACAATTGCTGAGGCATTAGCTTTCCTGCACCAAGAGATAGGCCATCATGGTATTGCTCATGGAAATCTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGAACCATGCATAAGTGAATGTGGCATTATGGATATGGATGATCAAAGAGGTTCAGCTTTTGGCAGTAGTAGTACTGATGGTGGTGCATCAGATATGTTAAAGGGAGATGTTTATGGGTTTGGTGTGATTGTTCTTGAACTGCTTACTGGTAAGTTAGTGAAGGGAAATGGGATTGACTTAACCGATTGGGTTCAGTCAGTGGTGAGGGAAGAATGGACAGGTGAAGTCTTTGACAAGTCTCTGTTATCAGAGTATGCAAGCGAAGAGAGAATGGTGAATTTGCTTCAAGTGGCTATAAGATGTGTCAATCCTTCACCACAGGTAAGGCCAACCATGAACCAAGTTGCTCTCATGATTAACACTATCAAAGAGGAAGACGAAAAATCATTGATCTATGAAGTCTGA


Promoter Sequence:
>Vu_19775::LG5:12594234-12596234(+)
ATAGTATAGTAGATATGCATGCAGACATATTCATTTTTCTTATCACTTTTGTTGTTTTTAAGCGTTGTGCATTTAATGACATTTAATGTATGTTCAGAACAACAAAGTGTTTTTCACGTTTTCTACCGTTTAGATAGGATTTGATCGTTTAAGCTTTTCACTAAGATACCAAGTAGTTGATGAAGACTTCATCGTTGGACAAATCAGATTGTTTGGCACATGGTATCATCTAGACTATGAAAATGCTTCTTTAAGTTGTTTATTTTTTTGCAAAAGCGCATTTAGCAAGGTGTATTTCATTACAAGTTTTTGGATCATTGTTTAAGAATTTTAACATACTTTCCGAAAACATCTTTTGAGACTTTTATCTATCAAGACATGTTGAGAGTTTGTTTTATCATCTCTTCAGAATGTAAAACACTATAGTTGCAAATCAAAATAAATTGTGGTTAGATTTCTCTTTATATCTCCACTTAATCTGACGAGTTTTGTTCAATATCATGAAAGACACAGATTTCTTAGTGCCAATAGCTTTTCATTGGCAAAGATTGTTTACAATTACAAGAACATCGTCAAAACCTAGTGCCTACTTCAATTGGAATAGTTAGTTTTGGATTGTATTCAGTGTTCTAGTTACAATTTCGTTATCAACCTTCCTGTTGTGAAAGTTGCGGACAAATGCGACTTCAAATGTGGTCAAAAATCTTAAACCAACCAAATTTAAAATCACAAAATTTCCGGCAAAATTATGGTGTAAGAATTCCTTACAGAATCTTAAATAAAATGTCTAAATGAGCTAAGATCCCAAGGTATACCGTTCATCGAAATATATTTACTGTTATTTCTATTCTTGAACAGAGCCAACAACTTAATTTAATGAGAAGTGTTTTTGCATGTGCCTACTTCTAGTCTTATATGATAAGATACAAACAAAAGTTCTATTACATAAAATAAAAAAGATAGATATAAGTTTATATATATATATATATATATATATATATAATATTTTTATTGGTAAAAGACTTTTTAAAGTGGTATCAAAAATAAATTAATAAGAGTTTGACCTAAAGCAGCAAACAATTTGTGTATTGACCCTCTACGTTAATGTGGTTTATCTATATCTTAAGTACAAATCTTGAAATTTATATATGTCATTTTTTAAAATTAAATGACTAAATTGAATCAAATAAAAATTATAGATCTAATTGAATTTTTTTTTATGAAAATTAGAATACCAATAAAGAATTTTAGCCATATTTATGAAAATTATAAAGGTTCTCATAATTCTTTTTGACAAAATTACAAATCTTCTAATATCCGTATACATATAAAGAGGAGAAATGAGAAGATTACACATCTATATTCATTTAACATTATAAAAATAAAATAATATAAAAAGTAAATTTTTGTACTTTTTAAAAATAGAACAAGTAAAAAATAAGGAAAAGTTATCAACAATCATAGAAAGTGAATTTTAGTATTTTTTAAAAATAGAAAAAATGAAAAATAAAGAAAGATAATATCATGAAAAAAAAAATTTTGGTAATAATATCACTTCTAGTACTTGTCTTACAAGAGACTTGAGTTGTGGTTTCACTGCTTCCTTTTTCTGATTACTTGATGATAGATTTTGGTACACACATACAAAAGAAACAACCGGAGGTGTTGTGAATATTGTTGTTATCATAGTATACAATGCCGTATGAATGAAATTAAGAAGGTAACGACAACACTAGTTGCAACTATTCATCATGCCGGCCAATATTTGTAAAAGAAATTGAGAAAGCTGCAATCAGTATTAAAATATTTGTTAAGGTATGATAAACTAATCATGCCAACTACAAACAAACGGTCATCGAAGTATCAGCCACACGGACCAGTTCCATTTCTTTTGTACTGAAATTACAAACTCTATTTTATTCATAAACCATTTCATTTTTACTCCACCCTCTTCAGCAACAAAGCTGGTGATCTCGCATAAACTCTTCCATCAACCCAAA


Gene Sequence:
>Vu_19775(+)
ATGAAAAGACCTTCTACATCGATAGCATTTGCCACATTCCTTTTCCTCCTAAACACGACCAGTTGTGTAGAGTACGAGGTCAAGAGAACACTGATACAATTTCTGGGACAAGTCTCTGGAAAAGATGGCCAACAGAACTCCAGTTTGGTATGGAAACAAGACTCTGATCCCTGCAAGGGCACCTGGCAAGGTGTACACTGCGATGCTCAAAACATGTCCATAAAGAAGTTGCTACTTGATAACCTCAATTTCTCTGGAACACTTGATCTTGCTATGCTTTGCAACTTGCAGCCCCTGGCTGCATCTCTCACATATCTTAGCCTTGATGGCAACAAAATCAGTGGAGGGATGGCCTCTGAGGTTGGAAATTGCAAACAACTCACTCGCCTGCACCTAAGCGGAAACCAACTTGCTGGAGACCTTCCTAGTTCACTTGCTATGCTGAGCAGTCTGAAGAGATTGGACATTTCAAATAACCAGTTTTCAGGATCTTTACCAGACTTGTATAGAATCTCAGGGCTGAACATGTTCCTCGCACAGAACAATTACCTTGGAGGAACTATACCTGCTTTTGAGTTCTCTAATTTTGACCAATTCAATGTCTCCTTCAACAATTTCCGTGGCCATATTCCAAACGTGCATGGCTATTTCTCTGCCGACAGCTTTCTTGGTAATCCTGAACTATGTGGAGATCCACTGCCAAAGAATTGCTCTGATAAGCCTATGCCTTTGAGTGAGGCTCAGACATCAGAAAAATCAAAGGGTGCTTCCAAGGAGCAGATTCTTATGTACTCAGGGTATGCTGCATTGGGTGTCATCATTGTCCTTTTCGTAGTCTTAAAGCTGTGTAGAAGAAAGAAGGGAGAGAATAAAGTTGAAGCATTGAATAATAGGGTAGGGGCCAGTGGAGGTGGTGATGTTGAAAAGCCGAGAAATGTTTCAAGTGAATACAAAAATGAGGTAAGCAGATCTGAGTTTTCAGTCCCTTCTGAAAGTGGGATGGTTTCACAATCACTGGTGGTTCTTTCGAGCCAAGCGGCAATGGAACTGAGATTGGAGGACTTGTTGGGAGCACCTGCAGAACTTATTGGAAGAGGAAAAAATGGAAGTCTTTATAAGGTGATGCTTGACAATGGGATGATGGTAGTTGTGAAAAGGATCAAGGATTGGACTATTTCAAGCCACGATTTCAAACAAAGAATGCGAATACTTAGCCAAGCAAAGCACCCTCGTGTCCTTTCACCACTTGCTTTCTATTCTTCTAAACAAGACAAGCTTTTGGTGTATGAATATCACCAGAATGGCAGTTTATTCAAGCTCCTACATGGTAAATATCACATCTTTCTTTTACTTTTGCATATTTTTTAGTTACACTTCGATGAACAAGAAATGTGACATACAAATTTATACACTTCATAGTGTTGTCAAAACGGCCAGTCCGACCATCATGGATTGATGGGTTAAACAGATTCACTCACTGGCTCACTTAATTATAAATTCTTTTCTAAAATCTAAAAAAATACTATTTTTTAATTCAAATTTAAATAATTTCACTCTAAAATAATATTAAATTCCAAAGATAATTCAAAATAAAAAATTAACAAGTATAATCTAAAAACAAACTCAAAAAGTGAATAAATAAGTTTATAATATTGATAATTTTTGTGTTTATAAAATTAAAGTCTTGAATAGATAAATTTATAATATTTTACTTTTTTGTAACATCGTTTTCTTTATTTTCATTTACAATACAATAAAATAGATATTAATTAATAATATTGAAACACAAAACAATAAATAATTAAATTAAACTAGGTGAGTTAGTAAACCCGGTTTATCATAGATTCAATCCAAGTAAGCTGAGTCGTAAGTGAATCGAATTAAAAATGGATTCGTATAAAAAAAATATTTTTTTTAAATTCAATCCCACTCAAAATCCTAACTAACATACCCACACTAATTCATATACTAAAATATAGCATGTGCTATTCAGGTACTACAAAAGCCTTAGACTGGACCAGCAGACTTGGGATTGCAGCAACAATTGCTGAGGCATTAGCTTTCCTGCACCAAGAGATAGGCCATCATGGTATTGCTCATGGAAATCTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGAACCATGCATAAGTGAATGTGGCATTATGGATATGGATGATCAAAGAGGTTCAGCTTTTGGCAGTAGTAGTACTGATGGTGGTGCATCAGATATGTTAAAGGGAGATGTTTATGGGTTTGGTGTGATTGTTCTTGAACTGCTTACTGGTAAGTTAGTGAAGGGAAATGGGATTGACTTAACCGATTGGGTTCAGTCAGTGGTGAGGGAAGAATGGACAGGTGAAGTCTTTGACAAGTCTCTGTTATCAGAGTATGCAAGCGAAGAGAGAATGGTGAATTTGCTTCAAGTGGCTATAAGATGTGTCAATCCTTCACCACAGGTAAGGCCAACCATGAACCAAGTTGCTCTCATGATTAACACTATCAAAGAGGAAGACGAAAAATCATTGATCTATGAAGTCTGA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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