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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19768 LG5 12507311 12510820 PREDICTED: NAC domain-containing protein 17-like isoform X1
Map

Annotations  
category   relationship type   keyword
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_19768.1
MCLQKPMEIVGYGFRPTDEELVHFYLKHKLLDDDPRVHVMTDIDLCDVEPWDVPEMLAKSVIPFKNSEWFFFRRVQFKSSNSERFNRTTKSGFWKPTGKPRDVRTGDTNTVIGTKKTLVFHSGRASKGVNSNWVIHEYHALNSLQSQNAFVLCRLKKKHGKTTEGGTAALICDEEESSRSVVSDNENQAIAEGVPSGDTFSRMETICQLTYQAENNISPAEQSLIDIEQDEASFPNPSNDAYFRKENNNRHIPYAQTPFEAMHTSLGSTQNPFEVGSILTLFETTQPSFETTNAPFETMETPFDTMETPLGAMYTSFETTQTSLGYMLTPFETTQPSFESIKTPFETMEIPSDTMETLSGTMQSPLGAMQSPLGAMNTSSETTQTSLGFMLTPLETTQLSFETIKTPFETMETPFDTLETLSGTMQSPLGAMQTPLGAMYTSFETTQTSLGSITPFETTHPSFETTNTPFETMETPFDIRETPLGAMYTSFETTQTSLGSMLTPFETTQTSFETSKSLETPFQTIETPLGAMYTPPEMIHPPSETTQIPLGSMRTSLGSMHIPLGSMQIPLASRKIPFESRKIPFQNTHTPSQTPFEFPKSLKRAYCESTCINPEVVLKLDACIDDSSTMCTKYLNSDEYHSSKMFKTSYDVVNGDTHLLFSNQEASQKQESIFQDNLRGMETSSCDSTVYNPEEINWNEISSFPCT*


CDS Sequence:
>Vu_19768.1
ATGTGTTTACAAAAACCAATGGAGATTGTAGGATACGGTTTTCGTCCCACCGATGAAGAACTTGTCCACTTTTACCTCAAACACAAGTTGCTAGATGATGATCCCCGTGTCCATGTCATGACTGATATAGATCTTTGCGATGTGGAACCTTGGGACGTACCAGAGATGTTAGCAAAATCAGTAATACCATTCAAAAACTCAGAATGGTTTTTCTTCCGTCGTGTTCAGTTCAAATCCTCAAATAGTGAAAGGTTTAACAGGACAACCAAGAGTGGGTTCTGGAAACCCACGGGAAAACCCCGTGATGTTAGAACAGGGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCCACAGTGGTCGTGCTTCCAAAGGTGTCAATTCCAACTGGGTTATTCACGAATATCATGCTCTTAACTCTCTCCAAAGCCAGAATGCTTTTGTGTTATGCCGCTTGAAAAAGAAACATGGGAAAACGACCGAAGGAGGAACTGCTGCACTGATATGTGATGAAGAGGAATCCAGTAGAAGCGTGGTTTCTGACAATGAAAATCAGGCAATAGCAGAAGGAGTTCCATCTGGAGATACTTTTAGCAGAATGGAAACAATCTGTCAGTTAACATATCAGGCAGAAAACAATATCTCCCCAGCAGAACAGTCTCTAATTGATATTGAGCAGGATGAAGCATCTTTCCCAAACCCATCTAACGATGCCTATTTTAGAAAGGAAAACAACAATAGGCATATCCCATATGCACAGACTCCATTTGAAGCTATGCATACTTCTTTAGGATCTACCCAAAATCCATTTGAAGTTGGATCTATATTAACTCTTTTTGAAACTACCCAACCTTCATTTGAAACTACAAATGCTCCTTTTGAAACTATGGAGACTCCTTTTGATACTATGGAGACTCCTTTGGGAGCTATGTATACTTCATTTGAAACTACGCAGACTTCTTTAGGATATATGTTAACTCCTTTCGAAACTACACAACCTTCATTTGAAAGTATAAAGACTCCTTTTGAAACTATGGAGATTCCTTCTGATACTATGGAGACTCTTTCAGGAACTATGCAGTCTCCTTTGGGAGCTATGCAGAGTCCTTTAGGAGCTATGAATACTTCATCTGAAACTACGCAGACTTCTTTAGGATTTATGTTAACTCCTTTAGAAACTACACAACTTTCATTTGAAACTATAAAGACTCCTTTTGAAACTATGGAGACTCCATTTGATACTTTGGAGACTCTTTCAGGAACTATGCAGTCTCCTTTGGGAGCTATGCAAACTCCTTTAGGAGCTATGTATACTTCATTTGAAACTACGCAGACTTCTTTAGGATCTATAACACCTTTCGAAACTACACATCCTTCATTTGAAACTACAAATACTCCTTTTGAAACTATGGAGACTCCTTTTGATATTAGGGAGACTCCTTTGGGAGCTATGTATACTTCATTTGAAACTACACAAACTTCTTTAGGATCTATGTTAACTCCTTTTGAAACTACACAAACTTCATTTGAAACTTCGAAGTCTTTGGAAACTCCTTTTCAAACTATTGAGACTCCTTTAGGAGCTATGTATACTCCACCTGAAATGATTCATCCTCCATCTGAAACTACGCAGATTCCTTTAGGATCTATGCGGACTTCATTAGGATCTATGCATATTCCTTTAGGATCTATGCAGATTCCTTTAGCATCTAGGAAGATTCCTTTTGAAAGTAGGAAAATTCCATTTCAAAATACACATACTCCTTCGCAGACTCCTTTTGAGTTCCCTAAATCATTGAAAAGGGCATATTGTGAAAGCACTTGCATAAATCCAGAAGTCGTCCTTAAACTGGACGCTTGTATTGATGATAGTTCAACTATGTGTACTAAATATCTTAATTCAGATGAATACCATTCATCAAAAATGTTTAAAACATCATATGATGTTGTAAATGGTGACACACATCTTCTATTTTCCAACCAAGAAGCAAGTCAGAAACAAGAAAGTATATTTCAAGACAATTTACGGGGAATGGAGACATCCTCATGTGACTCTACAGTATATAATCCTGAAGAGATCAATTGGAATGAAATATCTAGTTTTCCTTGCACTTAA


Promoter Sequence:
>Vu_19768::LG5:12505311-12507311(+)
AGAGGTGAGAAAATCAAACAGATTCATTAGAAAAATGAAGATTACTTTCTTGACGAATGAGGCAGATGCTTCATTTGAACTGATTTTCACTGTAACATACTATTGATATACCATGCTTCACGTGATGTATTTTGTAGTCTCGGAAGATTTTCTCATTGTGAATCAGAAGAACCGGAAGCCATCAATCTTCTGATAACAATACTAAAGGTTCTTTCATCTATATGGAGACAACGTCATCAAGACAACGTAGTTTTAAGGGTTTTTATGTGTGTATTACCACGTTAGTTTGGAAGTATTATCAATTTCAGTACACGTAGTAGTGTATGTAAAGGGTCGATGGTGACTGTTCCATAGTTCCTTTTCTTGTATTATCATGTTATTTATTTTGAATTGAGATGAAGTTTCTTATTTGTAGTCATGGTTATCAACCTCTCGAGTTAACTCGTAAACTCGCATGGATACGACTTCCGAGTTAACTCGAAAGTAAACTTTTTTTTTATGTAAATTCATTAAAATTGACTGTGAAATTGGTTGAATGATGTAAAATCACGAGTTTGTAAAGATTCTGCGAGCTTGAAAGAGAAAAAATTAAGAAAAAACGAGGCTGTTTGGGGTTTAGGGTTTCATGACCTGATTGTCACTATCTCTCGCGTCCCTCTTTCTCTCTATGGTCATCGCCTCTCCTCACCTCCATAATGATCAAAATTAATGACAATAATCCAAGTATTTATATTTTACAATATTTATTTTTATGAATAATGTAACTTTTTATTTATTTAAAGTTATATAATTTTGTAGAATTATTTAAATTAGGATATTACTTTTATAATATTTTTTTTATCTGAAGTAAACTTTTACGAGTAGAATTTACTCTATTCTCGCTAATTTATGTAAATTCTGGAGATAACTAGCTAATCTAGTTGGTGGTTCTTATAAGCAGTGTTCACTCATATTGAAACATATCTTAATAAGCCTATGTCATCAGTAATGAAAATGTTTTTGTTGCTGTTCAAAAACATGCTGGTATGTATGTCAGGTCAGATGTTCAATATGCAGTCAATAATTGTTTTCCTATCCAATAAAGATTTTTAAGCAAATCGTCACAAAAAAATATTAAAAAATGAAGGCTACCTGGAATTTTATTGAAAAGATAATGCATGTCCAAGTTTCAGCAATGCTAACTTTAACCAATCTCTTTCTGGAATGTTCATATGAAAATTCATTTACGGGGATACTGAAAAAACGTGGATGTGAAAAGAAAAATTGAGGTGATAAAAGAATCGTTGGAGTTCACTGTCTGTTCTTGGAAGTTAGCACATGACTAAAATCTTAAAAAGTATATCCACCATTGGAGTCATGTTCTTGATTGGTAGTGATGAGTATAACTAACCTCCAAAATAAAGCAAGTGATCCAAGCAAATTCACTAACCAATAGTTTTGAAAGAACATTGAAATGGTGGGCCACGGAAGAAACTTGGATACCAAGGCTCAAATAACTTTAAAAGGCATTGGTCCTTCTCATAGACACTCATAACAGATTATATCCTATCGAATGAGAAAATTTGTTAAATATATTTTTGTACATTTCGTAGAAAGTGCTGAGTTAGGAAAAAGAGTCTCATTCTCACGCGGTATTAGTACAATACAGTCACTTCATTTTTACTGTATCTATCTGTTACTTAAAAATTTTGATTTTAGAATCACGATAACATTTCATATATTTAGACTTTATATGTTGAATTTTCTTATAAAATAACCTGCCAATAAGATCACTTAGATGCAATATATTTGAACTATAAGTGCGTGATCTAAAGTTTTAATTTATAGAATAATTTTACGAACTTTTTATAAAGTTTGCAAGATTGCCTCATATTCCGAATCTTGAAATAAGAGCTTTGTATTATTATAATGTAATTTCCAAAGACAACTTCTTAACTAAGGAGTCATGTCAAGTCAATGAATGTGCAATTATAAATTCATTTCACCACACAAACACTGAA


Gene Sequence:
>Vu_19768(+)
AAACACTAAGTAGCGTTCTTCATTCAGTCCCCTGTTTCGTCATCCACCCTTTTTTCTTCATTCAACACTGAAGAGATGTGTTTACAAAAACCAATGGAGATTGTAGGATACGGTTTTCGTCCCACCGATGAAGAACTTGTCCACTTTTACCTCAAACACAAGTTGCTAGATGATGATCCCCGTGTCCATGTCATGACTGATATAGATCTTTGCGATGTGGAACCTTGGGACGTACCAGGTAATAATCCAAAGCCAAACTCTACATGAATCTTCGTGAAATCAACGTTGCCCTTTGTCTTGTTCTGATCTTTACTTCAATTTTTATTGTTTTAAATAGAGATGTTAGCAAAATCAGTAATACCATTCAAAAACTCAGAATGGTTTTTCTTCCGTCGTGTTCAGTTCAAATCCTCAAATAGTGAAAGGTTTAACAGGACAACCAAGAGTGGGTTCTGGAAACCCACGGGAAAACCCCGTGATGTTAGAACAGGGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCCACAGTGGTCGTGCTTCCAAAGGTGTCAATTCCAACTGGGTTATTCACGAATATCATGCTCTTAACTCTCTCCAAAGCCAGGTTTGTATTTCATTTTTTGAGAAACTTGTAACTAAATTACAGTGTGTGGAAGGAGTGTAAACTAGTCGAACCAAGATGAGTATTTAAAGCCTGGGTTTAACTTTTGAAAAACTTTATAAATTTTAAAATATCCCATGTAATTTTGTGCTTTAATCTTGACTATGGGTAATAATTAGTTTCTCGACAAAGCTTATGGAGAACCTCTCATGTTACTTACTGGATGTGTTTAATTGAGTCTTTCTATCTAAGAACACTCAAAATTCATCACTAATTCTCATCGAAGACCGTCAATTTCTTCTGCATGTTTGCCTAATTTGTGTTGACCTTTTACTTTTGTGAATTGGGCCAAATGAATGCTTACCATACTCCAATTTTTTCAGAATGCTTTTGTGTTATGCCGCTTGAAAAAGAAACATGGGAAAACGACCGAAGGAGGAACTGCTGCACTGATATGTGATGAAGAGGAATCCAGTAGAAGCGTGGTTTCTGACAATGAAAATCAGGCAATAGCAGAAGGAGTTCCATCTGTAAGCTGAAGCATCTTTCATGAACATATATACACTGTGACATGCGAACATGCCGAGAATTTATGCTTCTTTCTGTCATTTCATATATATATTTACATATTTTTTCAGGGAGATACTTTTAGCAGAATGGAAACAATCTGTCAGTTAACATATCAGGCAGAAAACAATATCTCCCCAGCAGAACAGTCTCTAATTGATATTGAGCAGGATGAAGCATCTTTCCCAAACCCATCTAACGATGCCTATTTTAGAAAGGAAAACAACAATAGGCATATCCCATATGCACAGACTCCATTTGAAGCTATGCATACTTCTTTAGGATCTACCCAAAATCCATTTGAAGTTGGATCTATATTAACTCTTTTTGAAACTACCCAACCTTCATTTGAAACTACAAATGCTCCTTTTGAAACTATGGAGACTCCTTTTGATACTATGGAGACTCCTTTGGGAGCTATGTATACTTCATTTGAAACTACGCAGACTTCTTTAGGATATATGTTAACTCCTTTCGAAACTACACAACCTTCATTTGAAAGTATAAAGACTCCTTTTGAAACTATGGAGATTCCTTCTGATACTATGGAGACTCTTTCAGGAACTATGCAGTCTCCTTTGGGAGCTATGCAGAGTCCTTTAGGAGCTATGAATACTTCATCTGAAACTACGCAGACTTCTTTAGGATTTATGTTAACTCCTTTAGAAACTACACAACTTTCATTTGAAACTATAAAGACTCCTTTTGAAACTATGGAGACTCCATTTGATACTTTGGAGACTCTTTCAGGAACTATGCAGTCTCCTTTGGGAGCTATGCAAACTCCTTTAGGAGCTATGTATACTTCATTTGAAACTACGCAGACTTCTTTAGGATCTATAACACCTTTCGAAACTACACATCCTTCATTTGAAACTACAAATACTCCTTTTGAAACTATGGAGACTCCTTTTGATATTAGGGAGACTCCTTTGGGAGCTATGTATACTTCATTTGAAACTACACAAACTTCTTTAGGATCTATGTTAACTCCTTTTGAAACTACACAAACTTCATTTGAAACTTCGAAGTCTTTGGAAACTCCTTTTCAAACTATTGAGACTCCTTTAGGAGCTATGTATACTCCACCTGAAATGATTCATCCTCCATCTGAAACTACGCAGATTCCTTTAGGATCTATGCGGACTTCATTAGGATCTATGCATATTCCTTTAGGATCTATGCAGATTCCTTTAGCATCTAGGAAGATTCCTTTTGAAAGTAGGAAAATTCCATTTCAAAATACACATACTCCTTCGCAGACTCCTTTTGAGTTCCCTAAATCATTGAAAAGGGCATATTGTGAAAGCACTTGCATAAATCCAGAAGTCGTCCTTAAACTGGTAAATATTTATTTTGCAAAGTCCAAATAATACTGAGTGTGCCTCCTTTCATTTCTGAACTTTCATTTTGATTTACTAAATTAAAATTTCAGAGTGCATTATTATGATTTGAATTTTGTTAGATTTTTCACAATGTATCGGGATTTTCTCGAGTAGATACAACATAATTTTAACGTAAAATGTCTTTTTGAGTTGGCTTTGATGCGTTCTTGTGATTCATGAGTCATTAACGGGCTATTATTGAGAACTACACTTTTTCTTGAGTTTGTGATATTGTTATATTCTTTTGAGCACTTTTATCAACGAATTTATTTGTTTATTTTCTTTTGAAATCATTGCAGGACGCTTGTATTGATGATAGTTCAACTATGTGTACTAAATATCTTAATTCAGATGAATACCATTCATCAAAAATGTTTAAAACATCATATGATGTTGTAAATGGTGACACACATCTTCTATTTTCCAACCAAGAAGCAAGTCAGAAACAAGAAAGTATATTTCAAGACAATTTACGGGGAATGGAGACATCCTCATGTGACTCTACAGTATATAATCCTGAAGAGATCAATTGGAATGAAATATCTAGTTTTCCTTGCACTTAAAGGTCATGGGAAGATCAGTATCATCTAAGACCGAACAACTTCATATGGTCCGAACTAAGAATTTCGTACCATTATTGGATTAGTGGATAAGAGTATATGTTATTAAAAATAACTTGCTCTGAAATAGCCAATTTACTAGAAATTGCATAATGACAATTATGCATTATAATTCAAAAGTATGTATAATCGGAAATGTATTAGAAAGTATTATAAACGATGAAATCGTGTGTATTTAAGATAGTAGATTGTGTACTAGGATGTTTGTACGGTTATTTGTAGTTTCTTGACAGAGTACTTTTTTGTAGTGAACTTTTTTCTCTAGGATACAAAGTGTATTTATCCATTGAATGCACTACCATATATATAAGTCTTTGTCCCCTTGT

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This project is funded by the Department of Biotechnology
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