Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19733 LG5 11948221 11949384 PREDICTED: zinc finger protein ZAT9
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 11948478 synonymous_variant p.Pro86Pro
C/T 11948963 missense_variant p.Thr248Met
G/A 11949033 synonymous_variant p.Ser271Ser
C/T 11949225 synonymous_variant p.Thr335Thr
G/A 11949312 synonymous_variant p.Pro364Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19733.1
MDKHKCKLCFRSFSNGRALGGHMRSHMMNLPLSKPEEASPRTIQLSFEAESASSSSSSSDDDEDGDKGLCYGLRENPKRSIRLVDPEFSFAAADTGSAILHDRESESESSKSNPTRKRSKRPWNNNNNNNINCSNYYYYNDHNNDTNNYTTPSIKKQVFGTEHEALMKKKSKTESWVDHEPASSVSEATTEEDVAFCLMLLSRDKWKRHKDQPQFMDVEDQYEEEEEEEEEEEEEDEAFEESEESQETMKLCKNRVRGRYKCDTCNKVFRSYQALGGHRASHKKIKVNVKVDGEEAEVEHRKKSGTCGVEKKIHECPVCFRVFASGQALGGHKRTHVTGSAPSTVPSTSAKFGNSFIDLNLPAPIDEDEASQIENSAVSDAEFVKTR*


CDS Sequence:
>Vu_19733.1
ATGGACAAGCACAAGTGCAAGCTTTGCTTCAGGAGCTTCTCCAATGGCAGAGCCTTGGGGGGTCACATGCGCTCTCACATGATGAACCTTCCTCTCTCAAAGCCCGAAGAAGCGTCCCCGCGAACCATCCAACTCAGCTTCGAAGCCGAATCGGCTTCTTCCTCGTCTTCCTCATCCGATGATGACGAAGACGGTGACAAGGGTCTCTGTTATGGCCTCAGAGAGAACCCCAAACGAAGCATTCGCCTCGTGGATCCCGAATTCTCTTTCGCAGCTGCAGACACTGGCTCCGCGATCCTCCATGACAGAGAGAGCGAGTCCGAGTCATCCAAGAGCAACCCAACTCGTAAAAGATCCAAAAGGCCATGGAATAACAATAATAATAATAATATTAATTGCAGCAATTATTATTATTATAATGATCATAATAATGATACTAACAACTATACCACCCCCAGCATCAAGAAGCAAGTTTTCGGAACCGAACATGAAGCCCTGATGAAGAAGAAGAGTAAGACAGAATCGTGGGTGGATCACGAACCTGCGAGCTCGGTCTCCGAAGCAACTACCGAGGAAGACGTGGCGTTCTGTCTGATGCTGCTTTCCAGGGACAAATGGAAGCGACATAAGGACCAACCGCAATTCATGGATGTGGAAGATCAATACGAGGAGGAGGAAGAGGAAGAGGAGGAAGAAGAGGAGGAAGACGAAGCATTCGAGGAGAGCGAGGAATCGCAAGAGACGATGAAACTTTGCAAGAACCGAGTACGAGGAAGGTACAAATGTGACACGTGCAACAAGGTGTTTCGATCGTACCAAGCTTTGGGGGGCCACCGAGCGAGTCACAAGAAGATCAAAGTGAACGTGAAAGTGGACGGTGAAGAAGCGGAAGTTGAGCACAGGAAGAAAAGTGGGACGTGTGGCGTGGAGAAGAAAATCCACGAGTGCCCCGTTTGTTTCAGAGTCTTCGCTTCGGGTCAAGCACTTGGAGGACACAAGAGAACCCATGTTACTGGGTCAGCACCCTCAACAGTTCCATCAACTTCGGCAAAGTTTGGAAACAGCTTCATAGATCTCAACCTGCCGGCTCCGATTGACGAAGACGAGGCTAGCCAAATCGAGAACTCTGCTGTTTCCGATGCGGAATTCGTCAAAACCCGATAG


Promoter Sequence:
>Vu_19733::LG5:11946221-11948221(+)
AATGAGGGGTGACATGTATAATATGAAAAATAAATAATTGAATTAAATCTATATTTGCTTATATAGTTTTAGAAATGTATAAATATATTTTTATACACATTTAATTTTAAATATATATTTGGTTTTCTAATTATATTAATTTAAGCAATTTAAGTCCAAAATTAATATGTTATTTAATTGTTAATTGAAAATATTAAATGTATATAAGTGATAATATAATTAATTCGTCATCTATATAAGTAATAGTGAAATTTAAGAGCAAACTTTAATGCACGTAATTCTAATAAATATATGTTTTTGTTTAATTAACAAGTGGATAGTATATTAGTAATGCATTAAAGTTATTTAATTTTAAAACTTGAAAAATTAAATATATAATTAAAATTTGATGAAGATTAAAAAGAGACATTTAGAGAAATATATTATAAAGAAAGTAGATTTAGCCAAATGAATTTGAAACACATAACAACATGATGATGCCAAGTTGCATTTTGTTTTGAAGAAATGAAAATGAAAAGGAAAAGTAGAAAATGAAGGAAAGGTGTAGTATGTATGTGTGTGTGTATGGGGGCACTACCAATGAGAGTGAGTAGTGGGACTTGGTCTACCAACCCCTAACAAAACGGCATTTACTTCTCGTGGAATTTGAATACTCAAAGGAAGGACAGTTAGTTTCTTACCCATTTCTCACCCTTCATTCCCATCTCACTCTTGTTCAACAAAAAGATCCAAAATTCAAGGCAAATCATTATCGATCTCAACACCACACACCCCAACACAACATACAATTTCTTAAGAAACACAAAACAAACACACATTCATTCATTTGGGATACTTATATACTATTTCAAGCTAAACCTACCATTGCTCACAATTGGATCTCAGATTATCTACACACAAACAAAACTTTTTATTCATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATATAATATAATATAATAATAATAAACTAATCTGCCAATAACAGTATCATAAACCAGTATTTGCGAAATCCATTTGGTATTAAAATGACACGTGGGTGATGTGAGTTACGTGTAACTCTTCCTTTCGACGGTTGTGCGTTATCCTTCGGTTGAAGGTCACAGCTCAGTGACGTTGGAAACTGAACGAGGTCGTTTTGTTTCTGTCATTAAAGAAGGTCTCCTCTTGCTGTTTCGTTCTTGAAACAGAGATCTCTGTTAAATTTCGAAAATGCCCTTGGTTATATTTCATTTAAAAATATGTAATTCATACACTGACTGGTATTAAAGCAGTCAATTATTAAACTTATTGAATTATAATAAATAATATAATTTTTGTTCATTGTCATTGAATGATATATATTAAATTCATTGACTTTCATTGATGAACGTAATGAAACTGAAAACCAAAGAGGCCTTTTCAATATAAGAAACAGAAAACAAAAAATTTATGGGAAGATATGAAAGAAATCAGAAAATGTGATTTTCCATTAAAGGAACAGCGTGTGCTTCGGTTTTGGTAAGTTTCTTGATATGGTGCAAAAGGGGTAGGTTGGGCAATGGAAAAAGGGTTTGAAAATGAATAAAAGAAAAGAGAGATTGAGTGGGGAATAAATACAGAAACGGGCAAGTGTGGCATGTTACATGTTCTCTTTCTCTCTCTTGCATGCACATCTTTAATTAAACCTCAATAAATTCAAATTTTAATTCTTTTTACGGTTTCCGTAAAAAGGGAAATAAAGAAAAGAAAACCCCCCATTTTAATTTTCTCTTCCATTTTTTTGACTTTTTATTATTTGTTCTACATTTTTATATCTCTCGGTGGAGGAATGCTTGTCACCTACTCCTCTCATACTCGGTACTCCATCCCTTCCCTTCCCTCTCTCCCTCTCTCTCAAAGCGCAACACACCACCAATAATCCCAGCAGCGCAATTCAATTCACCAAAATGCGAATACTCTCTTGAACTCCGTTCCTTTCATTCGCCA


Gene Sequence:
>Vu_19733(+)
ATGGACAAGCACAAGTGCAAGCTTTGCTTCAGGAGCTTCTCCAATGGCAGAGCCTTGGGGGGTCACATGCGCTCTCACATGATGAACCTTCCTCTCTCAAAGCCCGAAGAAGCGTCCCCGCGAACCATCCAACTCAGCTTCGAAGCCGAATCGGCTTCTTCCTCGTCTTCCTCATCCGATGATGACGAAGACGGTGACAAGGGTCTCTGTTATGGCCTCAGAGAGAACCCCAAACGAAGCATTCGCCTCGTGGATCCCGAATTCTCTTTCGCAGCTGCAGACACTGGCTCCGCGATCCTCCATGACAGAGAGAGCGAGTCCGAGTCATCCAAGAGCAACCCAACTCGTAAAAGATCCAAAAGGCCATGGAATAACAATAATAATAATAATATTAATTGCAGCAATTATTATTATTATAATGATCATAATAATGATACTAACAACTATACCACCCCCAGCATCAAGAAGCAAGTTTTCGGAACCGAACATGAAGCCCTGATGAAGAAGAAGAGTAAGACAGAATCGTGGGTGGATCACGAACCTGCGAGCTCGGTCTCCGAAGCAACTACCGAGGAAGACGTGGCGTTCTGTCTGATGCTGCTTTCCAGGGACAAATGGAAGCGACATAAGGACCAACCGCAATTCATGGATGTGGAAGATCAATACGAGGAGGAGGAAGAGGAAGAGGAGGAAGAAGAGGAGGAAGACGAAGCATTCGAGGAGAGCGAGGAATCGCAAGAGACGATGAAACTTTGCAAGAACCGAGTACGAGGAAGGTACAAATGTGACACGTGCAACAAGGTGTTTCGATCGTACCAAGCTTTGGGGGGCCACCGAGCGAGTCACAAGAAGATCAAAGTGAACGTGAAAGTGGACGGTGAAGAAGCGGAAGTTGAGCACAGGAAGAAAAGTGGGACGTGTGGCGTGGAGAAGAAAATCCACGAGTGCCCCGTTTGTTTCAGAGTCTTCGCTTCGGGTCAAGCACTTGGAGGACACAAGAGAACCCATGTTACTGGGTCAGCACCCTCAACAGTTCCATCAACTTCGGCAAAGTTTGGAAACAGCTTCATAGATCTCAACCTGCCGGCTCCGATTGACGAAGACGAGGCTAGCCAAATCGAGAACTCTGCTGTTTCCGATGCGGAATTCGTCAAAACCCGATAG