Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_19725	LG5	11757784	11758272	PREDICTED: LOB domain-containing protein 25-like isoform X1	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
G/T	11758151	missense_variant	p.Gly123Val

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_19725.1

MASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNEMPTQDGRRMAEGGASSLGQSPGYYYPSPWNNDPLGDGYHRGDNNM*

CDS Sequence:
>Vu_19725.1

ATGGCCTCTTCTAGCTACTCTAACTCTCCCTGTGCTGCGTGCAAGTTTTTGAGAAGGAAATGCATGCCGGATTGCATTTTTGCTCCATATTTCCCACCAGAAGAGCCTCAAAAGTTTGCCAATGTTCACAAGATATTTGGTGCGAGCAACGTGAGCAAACTCCTGAATGAAGTCCAACCCCACCAAAGGGAGGATGCAGTGAATTCTCTAGCCTATGAAGCTGAGGCAAGGATAAAAGATCCAGTTTATGGGTGTGTTGGGGCAATTTCAGTGCTCCAAAGGCAAGTGATTAGGCTCCAAAAGGAACTTGATGCCACAAACGCTGATTTGATCCGCTATACTTGCAATGAAATGCCAACTCAAGATGGGAGAAGAATGGCTGAAGGTGGAGCTTCCTCTCTGGGTCAGTCTCCTGGTTATTACTATCCTTCTCCCTGGAACAATGATCCACTTGGCGATGGTTATCACCGAGGTGACAATAATATGTGA

Promoter Sequence:
>Vu_19725::LG5:11755784-11757784(+)

ACACTTTTGTTATGTATGTTTTTAATAATACGGATAATTTATTGTGGAAAATATTATTTTCCATTTCCATAATTTCATTTATATATATTCTTAATTTTAGTTTTTTCTATTTCAATAGAATTTGAGGAGAGAGAACAAGCTATCCATTTGAATATTCTGGGAGTAAAAGCTGAGTGCAATTATACAGACATACTAGAATGAAAAGATAAGTACCATGTGAAGTTGATTATATGTGTGCCTTGTCTAAAAGAAAATAAATAAAAAGAAGAAAACAGAACCGAAGAGATGAAAATAAAACCAACCTTCTGTTTCATTACACCTGCGTAACAAATGCTAAGGAGTATGTTTCATCGTTGGCTCACTTTCTGTCCAATTTGCACTTATTCTGAAATATATATGAGGAACTACTTAAACTAATGGGTCAATTCCTAAACCCTTGCTTAAGAGAAGGAAGAACAAGGTTTGCATTGAACTACCACAAATAAACTAGTTATAAATACAAAGGTATATGATATCCCAGAATATATATAGTTGTTAGTGGGACAGATTATTACAGTTAACCTTGGCTACTGTATTGGGTATTATTATAAAGGTTGTGTCATAGTCATTCTTTTTCACTTGTAGCCCCATTTATTGCACTTGTCTTTTGCTTTCTTTTCCACTCTCTCACTGGAAATGCTCTTTTTCTCCTATACTCTTTGTTGTTGCTTATCTAGTTGTCATTGTATTTGCGGGTTTTTCTCATCTTGTCCTGCAAGTAACTAGGGTTTTCCGTTTTCTCTCTGAACTCTCACATCCAATAGTGAATTCCCAAGACTTCTATCCCGGTGCTTGTAGACTTCTTTTTCACTGGCATTATTAAAGAATAGATCTTGAAAGACCCTTCTGCAAGAGAGAAAAAAAAAGGTATTGATCTAAATTACAATATCGTTTGTTCAATTAAACCTAGCTAGCTGTACAAGGTATAGTTTTTTCCAATTATATGATTCTTTTTCTTCTTTCTGATTGGTGTTTTCCTAATAAATTTATGTTCTGAGGCTTGATCCAGGTTTTGGTTTTTGGAAATTTTTGAAAGGAATGAAATTCTGGGTGTGTGAATGATAGATATATCATCCTACTGAAAGAGTTGAAAATTGAGAAAACTTCCACGCGTCATATCCACCAATAAGCTGAAAAGATTCCTGGTAGGTGTACCTTTCTTTTAGCCTCTCCAACTGAAAAACACAGAAGGCTAGACCTAAGGAGAGATGAGGAGAGACAGGGAGAGAAATTCAGGGAAGAAATTTATTAGTCTGAGATGAGGAAATCAAACACACCCCAATTAATAATACTGTCGTCTCACATGTAGAAATAAGGGTTCTGGGTAGTGTAGTGAGAAAATCTATAAATAGGGCCTCCTCTTTTCGGTTTTTCCAATCCACTAATTCAACAGTGGACTTTGATTCAACATAAAGACGGCTTCGGGATAAAAAGTGAGAGAAGTTAGAACAGTAGTTGAAAATGTTATTACCAAAAAAGGAAGTAGCAGGATGTGCTTTAGGCAAGTAAAGTCTCCCTAACCCTAGTTTTTTCCATGTTCAAGCAAGTCTAGACACTAAATTTTAGATTCTATACGATCACTATACGATTAACTAAGCCCGCTTTAGCTTTTAATCATTTTCAAAAAATGGTCTGTTGCTAATTTTCTTTATATATAGCTTTATTTGCTCCCACTTTAAAATTATATTCATGAGATGCATTGTATTTAATCACAGCATATACGTGCTTTTACAGTATTCAAACTGTAATAGATTCTTTTGTGCTGTATTTTGATTTTCATGTTAGATAATGTCTTTTGTTCATGAGTTGGAGTACCTTTTGTACTCTACTCTCCTTTATGAATTTCCTTGTTTCTGATATAAGAAAAACTGTAATAATAAATAATGATGAAATTATTCTAAATTTGAGATTTTGTATTGTTTTTTTGTGTATGAAATATTGGGTAATTGCAGTGAAGATCA

Gene Sequence:

>Vu_19725(+)