Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19582 LG5 9382413 9383333 PREDICTED: probable transcriptional regulator RABBIT EARS
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 9382577 missense_variant p.Thr253Ala
C/A 9382691 missense_variant p.Asp215Tyr
T/A 9383097 missense_variant p.Arg79Ser
T/A 9383118 synonymous_variant p.Gly72Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19582.1
MEESQCLIRSKRKYSLSSNLHGSSTDYPSCDDHSWEEQAFAKDAAWSGCVWPPRSYSCTFCTREFRSAQALGGHMNVHRRDRARLKQPHSPQNEILNYDLEKTQAQNSVQISFTSLGYLYPPSISGLAHNTNPNSDPYSHVVASPSKVLGTPVNKRCREKPQIPQYNSSSIFKGCHEFSPSLSSKSWPNLTDDFRFCSSRLDLEASVEKKLQGFDSGCRSEGDKGKTEVGVSMNLFMSRAHPLVQSENKETDTSFKKRKSDTSSVPFFPKSCSVDKDHVQSETFDFSPSSIEELDLELRLGHRSEV*


CDS Sequence:
>Vu_19582.1
ATGGAGGAGAGTCAATGTTTGATCAGGAGTAAGAGAAAGTACTCTTTGAGCTCTAATCTTCATGGTTCTTCAACTGATTACCCTTCCTGTGATGACCACTCATGGGAAGAGCAAGCCTTTGCAAAAGATGCTGCTTGGTCTGGTTGTGTGTGGCCACCACGATCATATTCTTGTACCTTTTGTACAAGGGAATTTAGGTCAGCACAAGCTTTAGGAGGTCATATGAATGTTCATAGAAGAGATAGAGCAAGACTAAAGCAGCCACATAGCCCTCAGAATGAAATCCTCAATTATGATCTTGAGAAAACTCAAGCCCAGAATTCGGTTCAAATTTCTTTCACTTCGTTGGGTTACTTATACCCACCTTCTATCAGTGGATTGGCTCATAACACTAACCCTAATTCTGATCCTTATTCTCATGTTGTTGCTTCACCTTCCAAAGTTTTAGGCACACCAGTTAACAAAAGATGCAGAGAGAAACCCCAGATTCCACAATACAATAGTTCTTCAATTTTCAAAGGATGTCATGAGTTCTCCCCTTCTCTTTCTTCCAAATCCTGGCCAAATTTAACTGATGACTTCAGATTTTGTTCGAGTAGGCTCGATCTTGAAGCTAGTGTTGAGAAAAAATTGCAGGGATTTGATTCTGGGTGTAGGAGTGAGGGTGATAAGGGTAAAACTGAGGTGGGTGTGAGCATGAACTTGTTTATGAGTCGAGCTCACCCACTTGTGCAGTCTGAGAATAAAGAGACAGATACAAGTTTCAAGAAGAGAAAATCAGACACTTCATCCGTTCCATTCTTCCCCAAATCATGTTCAGTTGATAAGGATCATGTGCAGTCAGAGACGTTTGATTTTAGCCCTAGCTCTATAGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCATAGGTCCGAGGTATAG


Promoter Sequence:
>Vu_19582::LG5:9383333-9385333(-)
GTTTAGAGAAATTATTATGCACACATTAAGTAAAAATAATAGCAATAAACTACATGTAAGAGGATATGCTAAATTTTCACCAGGTGTTGCCAGAAGCTTTGTAGAAATTTGTGGAGGCAGAGTGTGCAAAATAGGAGAACAAGAAAGTAACTTGTATCAGAAAGAGGCACTTCAGAGGCAAAGCATATGAAAAAACCATATTAAGAAAATAATTAGAGAAACTTGCTTTATTTTCAACAGAACAATATACCTAATCTAAAACCTATTCCAAAAATGAAACAAAAAAAGGGTAATAAAATTAAACCTTGATTCACAATCAAACATTCCAAGCAACACCACGGACAGATATGGAGGAGGAGGAGCAGCGAGTGCAACCAGCTCCAACACTGGTGCAGGTATTTTGGCTCCCCTTTCCTACACCAACAGTAGGAAGTATTTCATTGATTGCTATTCAGAGTCATAGACGCCTCCATCATCAGAGAAATCATCAAATGTTCGCATATCAAGCAGGAGAAGACGAACACGAAGGAGAGCAGGAGAAGACGAACACGAAGCCAAGCAGGAGAAGATTGTGGTGCGGTGAAGGGTTTGGGGGAAATTTGATGAAGGCGGGGAAAGAGGTTAGGGTTTAGTGATAGTTTCAGAGAATTAGATTAGATGCAATATTCCTGAAATTAATGACTGAAGGCGAGGGAAGGGATATAGGTTGGTAAGTATTCTAAAAATTAAAAAATTATATTTTAGGGACGGTTTTGTTATAACCGCCAGAAATACCTGCGGTTTTAGACATAAACCGTAGGAATTATTCGGGGTTTCTAAAACCGCCGGTAAATAACCCCTCTTAAAATTAATTATTTTTGTAGTGTTACATTTTTTTAGCGTTTTTATATCAAGGCTATAGCCATCTCATCTAACTTTCAACATGTTCTTCCTATTAAGAATGTGAGTTAGAGGTTTTCAGGATCGTGGATAAATAGTAGGAACTTCTTCTCCTTGTTAGATATTTTATCATTTCCTTCAAAAATAGAAATGCTAGTGGGTTAAATGTACTAATGTGGTTATGATGGAGGATTTTTTTTTTCGTATTCAGTTTTGTGTTCATACACAACTTAATCTTTAACCAGAGTAATTAGTTAATGATTTTGATGCAAAAATAATTTAGAGTTACTTCATCATAAGTAATCAAATTATTTTTACAACTTCATAAATTCAATTCAGGTTAGAGTTCATATCAACTAAAAGTAATTATAATGAAAAAGTAGAGAGAAATCTCACCTAGAGAGAAACCCAATCTTTTGCCGCAGGAACGATTCTTTATAATATCTAGACTCAAATAACAAAAACTAATTCACACAAATTAATAAAGTTAAATAGAAAAATTATAATTATACTAATATTTGAAAATCAATCTAAAATATTCTTTCTAAAAATTTGATATTAAAAAACTTAAAATTAAAACATCAATTAAATGAGGGACATTTTAGACACACTCTTATAAGATAAAATTAATTATAATTTATTATGTTTTCCGATCAAATAATAATAATAATATTTTGACTAGAAGCATCAGAAAACCAAACGGCACAAGAATAATTTTCTAGTCATTGCTGCGTCAAAAGAGGATATTTCAGTCAGATTTCTCGATTTGAGAATGTAATACTCTGTGGCCATCTCACACAACTAATTTAAGGACCCACAAGAATAATTTTGTAGTCATAGCTGCATCGCATTCTCTCACACAGAAAATGCAGGAAAACGGGAACTTGGAGTATTCATACAAACGTTGGAAGCCAACCATAAAATAAAAAATATATTAGCTATAGTCCGAGACATTGAAGGTAGAGTACCAACTACTTCACCTTCCAAAAACTCTCTCTCTCCTCATCTATCTCAGGCTCCTCCAACAGTGTAGACTCATGTAGCTTTCAATTCCCATATCTACAATCTCAAAATTCCCTTCACTTTTTCTTTTCCTGAATCAAGGTGAACAAACTCTCACA


Gene Sequence:
>Vu_19582(-)
ATGGAGGAGAGTCAATGTTTGATCAGGAGTAAGAGAAAGTACTCTTTGAGCTCTAATCTTCATGGTTCTTCAACTGATTACCCTTCCTGTGATGACCACTCATGGGAAGAGCAAGCCTTTGCAAAAGATGCTGCTTGGTCTGGTTGTGTGTGGCCACCACGATCATATTCTTGTACCTTTTGTACAAGGGAATTTAGGTCAGCACAAGCTTTAGGAGGTCATATGAATGTTCATAGAAGAGATAGAGCAAGACTAAAGCAGCCACATAGCCCTCAGAATGAAATCCTCAATTATGATCTTGAGAAAACTCAAGCCCAGAATTCGGTTCAAATTTCTTTCACTTCGTTGGGTTACTTATACCCACCTTCTATCAGTGGATTGGCTCATAACACTAACCCTAATTCTGATCCTTATTCTCATGTTGTTGCTTCACCTTCCAAAGTTTTAGGCACACCAGTTAACAAAAGATGCAGAGAGAAACCCCAGATTCCACAATACAATAGTTCTTCAATTTTCAAAGGATGTCATGAGTTCTCCCCTTCTCTTTCTTCCAAATCCTGGCCAAATTTAACTGATGACTTCAGATTTTGTTCGAGTAGGCTCGATCTTGAAGCTAGTGTTGAGAAAAAATTGCAGGGATTTGATTCTGGGTGTAGGAGTGAGGGTGATAAGGGTAAAACTGAGGTGGGTGTGAGCATGAACTTGTTTATGAGTCGAGCTCACCCACTTGTGCAGTCTGAGAATAAAGAGACAGATACAAGTTTCAAGAAGAGAAAATCAGACACTTCATCCGTTCCATTCTTCCCCAAATCATGTTCAGTTGATAAGGATCATGTGCAGTCAGAGACGTTTGATTTTAGCCCTAGCTCTATAGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCATAGGTCCGAGGTATAG