Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19581 LG5 9371401 9371928 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 9371539 synonymous_variant p.Ser130Ser
G/A 9371591 missense_variant p.Pro113Leu
G/A 9371702 missense_variant p.Ser76Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19581.1
MEFNTPIYKKSEIRWSSDDQGGPGQVKSFSCSFCKRGFSNAQALGGHMNIHRRDRAKLKQSSEESLLSLDISIKTSSDHRNDPSDLEEKIFFRLGSGEDQKHARNRKMPFNFPHKSDHDYASERAMFIGSAEIPHHLPSFVLGQRIEEKTADLDLELRLGLHPQETATLNTRSFF*


CDS Sequence:
>Vu_19581.1
ATGGAGTTCAACACCCCAATCTATAAGAAATCTGAGATAAGGTGGAGCTCAGATGATCAAGGTGGCCCTGGACAAGTGAAATCTTTTTCTTGTTCCTTCTGCAAGAGAGGATTCTCTAATGCACAAGCCCTAGGTGGCCACATGAATATCCACAGAAGAGATAGGGCAAAGCTCAAGCAATCTTCTGAAGAAAGCTTGCTTTCGTTGGACATCTCAATCAAGACCTCAAGTGATCACAGAAATGACCCTTCTGATTTGGAAGAGAAAATTTTCTTTCGGTTGGGTTCTGGAGAAGATCAGAAGCATGCTAGAAATCGAAAAATGCCATTCAATTTCCCTCACAAAAGTGATCATGATTATGCATCAGAAAGGGCCATGTTCATTGGTTCAGCAGAAATTCCTCATCATCTTCCTTCTTTTGTTTTGGGGCAGCGAATTGAAGAGAAGACAGCTGATTTAGACCTTGAACTTAGGTTAGGCCTGCATCCCCAGGAGACAGCAACATTGAACACTAGATCGTTCTTTTGA


Promoter Sequence:
>Vu_19581::LG5:9371928-9373928(-)
CCTAATAATTATAAATATTGAAATTATACTGCTTATTTTGGTGAGAAATAAAGATATATCTCAACGTTTATGTTTTTTTGGCATTTCCATTGGAATGCACTACAGATTTTTAACTTTATCAATAATATTGTTTTGTACTTTTCACGTACATACTTATATATTAATTAAGGTTATATTGATGAACTTTATTATATATATATATATATATATATATATATATATATATATATATAATATTTATTAAATATATTATTTTTATAAAAGTAATTAAAAATTAGTGATCAATTTAGTAACAATTATAATCATCAACTATTTAATTAATGGGTTAAATATGTTTTTAGTTCCTAAACTATTGGCCGTTTCTGGTTTTCGTCCCTCTTTCAAAATAAGATACAATTTGGTCCTCATTCTTTTCAAAATTTTGGTTTTAGTCCTCGAAAACTAACACCGTTAAAAATGTGGTAGTTTTCGAGGTTAGTTTTCAAGGACTAAAACCAAAGTTTCGAGGACTAAAACTAGAATTTCGAAAAGAATGAGGGCCAAATTGTACCTTATTTTGAAAGAGGGACGAAAACTAGAAACGACCAATAATTTAGGGACTAAAAACATATTTAACCCTTAATTAATCACCGTAGAAAACCGATTATCTATCTTAGCAATACTAGTTATTGGTTTCAATTATTAAACTTAGTTTGTAAACCATTGAATTTAGCTAACACTATATTTTATGAATACCGTGCATCAATAAGTATGGAAATGGTAAAAAAGACAGGTTAGTTATTATATCGGTTGATACTTTTATTAGTGATCATTTTAGTCATATAATAATTTGGTCTATTTCATGATTTCTCCTTATTATTGAAAGAAAAAATGTTAAGTGAGACGCAAGAAGAATTGGATGTTTGAGTTTTGGAAAAGATAATTTCTTTTGTTGGTTAAGAACATGAAAATGAAATTGAAGAAATGAAATACTAATCAACGAGAAAAAAAGTCTAATTTAAAAATAAATATTGAAAGTTTTCTGAAAGGGGATTTCAAAATAAATTATTTAATAGAAAGAATAACTTCTGAATATTATATATATATAATCTAAAATGCCATAGCTATCATCATATCATTAATGTGTTTAGATTTTACATAAAGCAAGGATAGACTCATATGTATCAGGTTGTCATTTTAGTAACATTTAAAACGAAAGATAAGAAGATCACATAATTATTTAAACTATTTGATTAAAGAGACTCTAACATCACGCCAACAAACCACATAATTTATATATTACAAAAAAAGGATAACTTTCATTAAATCGTTGGGAAAATTATTCATGCTAATTTCTAAACAAAATACCTTTTTCTATTTCAGAACTTATATAATTAATAGGTGTTTATCCCCTTTTTGCTAATGAAGAGTTTAATACCATTGCAAGTGGACCAAAATGTTTATTTAATTTTTCATTTCTCAAATAAATCGTTAAATAAGAAGAAATATTGCAAATGACAGCTGCTATTGTGATAAACGGCTAACTAATTCTTGGAAGACAATCGATATTGTATTTTCTGCCACACATCTAACACAATAATAAGCTTAATACTTGAATTAACTTTTACCTTGAGGCAAAACATTTTTTTAGCTTTTCACCGAGCCTAAGAGCACAAATTGAAAATCATATAAACTCTTTTTGATCCTCTCAAGGTAGTGTAAAAGGAAATGTCTGGTAGAATAATTGAACGAGTAATAAAGATGCTGCAAATTAATATTTTATTCAATTAGCTTCAAGGTTTTCTTACCATTTTTAATACCATACATTCTAAGTTATACTAAGTTAACTAAATTACTCAGCTGACATAATAAAAAAAGGCAAAAAAATGCATAGTTTCTGCAGTTTTCCAAATTATAAATTTTGTCTGAGCCATTCTGTTGACTATAGTTTCATACCACTTCTGTTTTCCTTGGTGGAGTTTATGTCTTCTTGCTATTTCCCCTTCACTTGCCAAAAAAAG


Gene Sequence:
>Vu_19581(-)
ATGGAGTTCAACACCCCAATCTATAAGAAATCTGAGATAAGGTGGAGCTCAGATGATCAAGGTGGCCCTGGACAAGTGAAATCTTTTTCTTGTTCCTTCTGCAAGAGAGGATTCTCTAATGCACAAGCCCTAGGTGGCCACATGAATATCCACAGAAGAGATAGGGCAAAGCTCAAGCAATCTTCTGAAGAAAGCTTGCTTTCGTTGGACATCTCAATCAAGACCTCAAGTGATCACAGAAATGACCCTTCTGATTTGGAAGAGAAAATTTTCTTTCGGTTGGGTTCTGGAGAAGATCAGAAGCATGCTAGAAATCGAAAAATGCCATTCAATTTCCCTCACAAAAGTGATCATGATTATGCATCAGAAAGGGCCATGTTCATTGGTTCAGCAGAAATTCCTCATCATCTTCCTTCTTTTGTTTTGGGGCAGCGAATTGAAGAGAAGACAGCTGATTTAGACCTTGAACTTAGGTTAGGCCTGCATCCCCAGGAGACAGCAACATTGAACACTAGATCGTTCTTTTGA