Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19553 LG5 8947399 8949604 PREDICTED: probable WRKY transcription factor 49 isoform X2
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Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
A/T 8947663 missense_variant p.Leu206His
C/G 8948176 intron_variant
G/A 8948283 intron_variant
G/T 8948461 intron_variant
A/T 8948619 intron_variant
A/G 8948698 intron_variant
C/T 8948707 intron_variant
G/A 8948755 intron_variant
T/C 8948944 intron_variant
C/A 8948946 intron_variant
G/T 8948985 intron_variant
A/T 8949234 intron_variant
A/C 8949599 synonymous_variant p.Val2Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19553.1
MVESAMSKTVMEEVMATWSEGSEEDELVRELLDDGSPLLMVPQEPIQNPITKPSSTHHAFNSFLSNIYSGPTISDIENALSVTNQRDHFPPLSSPRVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSIEDPDTLIITYEGLHLHFAYPYFLMGQPDQSQSHQPIKKSKPTSSQDQAQAHIEDYVHEAQSSATSGVLPSTSLDSPQDMAQENLGSQGLLEDMVPFMVRNPANSVSSAHTNFSCSSFRSPPTSPLWLKF*


CDS Sequence:
>Vu_19553.1
ATGGTTGAATCAGCCATGTCAAAGACAGTGATGGAGGAAGTAATGGCAACATGGTCAGAGGGGTCAGAGGAAGATGAGCTTGTGAGAGAGCTTTTGGATGATGGGTCTCCCCTTCTTATGGTGCCTCAGGAGCCAATTCAAAACCCCATAACAAAACCCTCTTCAACTCACCATGCCTTTAATAGCTTCCTCTCCAACATTTACTCAGGTCCTACTATCTCAGATATTGAAAATGCTTTGTCAGTCACCAACCAAAGAGACCACTTCCCACCACTCTCATCACCCAGAGTTTCCATATTGGAGAGGGGTTTGAGCAAGATTGAGAATAAGTATACCCTCAAAATCAAATGCTTTGGCAATGGGATGGGAGATGATGGATATAAGTGGAGGAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAGGTTGAGAGATCCATTGAAGACCCAGACACTCTTATCATAACCTATGAAGGGCTCCACTTGCACTTTGCTTATCCATATTTTCTCATGGGCCAACCCGACCAATCTCAATCCCATCAACCCATCAAGAAGTCCAAGCCCACTTCTTCACAGGACCAAGCCCAAGCCCATATAGAAGATTATGTTCATGAGGCCCAATCAAGTGCCACTTCGGGTGTGCTGCCATCCACTTCATTGGACTCTCCACAAGACATGGCCCAGGAAAACTTGGGCTCACAAGGCTTGCTTGAAGACATGGTGCCATTCATGGTTCGGAACCCAGCAAACAGTGTGAGCAGTGCTCACACAAATTTTTCTTGTTCTTCGTTTCGTTCTCCTCCGACCTCACCTCTGTGGCTTAAATTCTAG


Promoter Sequence:
>Vu_19553::LG5:8949604-8951604(-)
TTCAATTCAGGTCCATTTTAACCATTCTACAACAACGGAACTCCGTTTTATTTGACATGTTTTACTCTTGTCCAGGTTTAGACTAAGGATGTTTTAAGTATCTGTCAACTTTTGTGTAGTCTGACATAATATGTTAATCTAAACATCCACTTAATCTTCTCTCTTACTTTTATGGTAGTTATTAAATTAACTTATTGCAGTGGTTAATCATCAATTAAAATTAGTTTAGTGCATCCAACTTGGGTATATTATATTTATACACAAACTTTTCTTTAAGATAAACTCTCTAAAGTGATAATATAACAAAGATATATATTCTTTAATGGTATACATATAAACACATTTTATAGATGTGGAAGTTTTATTCTTCTGTAAGTTGATGTCACTACTTATTTTCATAAAGTTTAGGTCAAACTTTTTTTGCTGTCAGATGAAACAATGCTGGTAAAATCTATAAGCCATAAATTCCGGGACTTGTGCTGTAGCCAAAAAACCTTCCTAGGATGCTTTTTTTTCTGTCTGAGATTGTGATTTTATTAAAATTTACTTGGGACAGAAAATATTAATCATTATAGCAATTATTTTCTCTCTTAGTGTTTGTCATCTTTCATTTCAAATGTTTGACGAATTTCTAAATGTTATAATCATTCATCCCTATTTACTTAAGGTTTTGCTATCTACAGTCTTTTAATTCTTCTACTTGCTAGAACTAATTAAACAAATGGGATCCAATGAAGAATCTATCTACCTATGTACACATGTGTTGTAGGTAAATTGGAGTATGTTCTGTGCTATGAATGTCATATTTCAATGAATCATAATCGAAATTAAAACTCTGATTTAGTTATTTGGCTAACCTCCATTATCATTCCTAATGTTACTTTTTTTCAAGGAGAATCGTACTTTAGTAAGTAACCTACCGTTTCATCTATAGTAGCAAATAAATAATTGAGCAAGGTAGCACCTACCCTGATAAACATTTCTGCTAAAAAGAATTGAAACGAGTCTCATGAGTCAAATAATATCCTAAAAGTTATTTTTCAATACATGATAAATATTTCTTTAAGGTTGACTCTTGCTTTGGTTGAAATGGGGTCGTCAAGTAGCTTCTGTCTAGTGTGATATGCATCTATCCCATCAGGTAACAAGACAAAATAAATATTTAAACAAAACCATAGCCCACACATATCAGTACTACAATAAATTTAAAAAATGTCAAACCCCCTCACATTTGTAATGTTTCTGCAGCATATCATGCTTCTATGGACTCCAACCTTTCAATTCCAAAAAAACTAATCCACAAGCATAACCATACATCAAATTGACCAAGTTTCTGAAAAAATCAAAAAGTGAAAACTATAATTTACAGAGAACTTTGAACTCGTATCACTTTACTGGCAGCCAAAAGCAAAAATATGTGACTATGTAAGTCAGTGCTAGAGATTTTTACTATGTTTAGTTTCATTTTAAATGGTTTAATATCATGTTCAAAAGTCGTAAGTTATTTATGTTAAATAAAAAGTGTATACTAAATTTATTTGCTAAGTTGTTCCTAGTATAAAGAACTTCCGGTTTTAATTGTGTTTAGTATAATGTGTGTAATATCATATGTTTCAATTTATATGCAGATCAGATGATATCTGTAATGATAAATTAAACCAGTTTTACATGCAAACATAAATTACCATGCTACATGCTACATCATGTGCACAGTAGAAAGGCCCCATGAAATTAAGAGGTGGTGGTGATTAATGACAGATTTTGCAGTTAACGAAAGATGTTACTATAGTGTTTGGAATAGAAATGAAGAAGGAAGTCAAAGTAGAATGCATACAAAAACATAGCCACAGGTTGGGTTACTTATTAAAGCCAAGGAAGGGAGAAGCAAGTATACGTCACAACCACCTTCTCATCTGCTCCACTCTTTCCTTTCTCATTACCTTATTATCTTCTCGAGCTTCCTCTTTCAAGAAGGATCTTGTTGCCCTGGTCTAATAAAT


Gene Sequence:
>Vu_19553(-)
ATGGTTGAATCAGCCATGTCAAAGACAGTGATGGAGGAAGTAATGGCAACATGGTCAGAGGGGTCAGAGGAAGATGAGCTTGTGAGAGAGCTTTTGGATGATGGGTCTCCCCTTCTTATGGTGCCTCAGGAGCCAATTCAAAACCCCATAACAAAACCCTCTTCAACTCACCATGCCTTTAATAGCTTCCTCTCCAACATTTACTCAGGTCCTACTATCTCAGATATTGAAAATGCTTTGTCAGTCACCAACCAAAGAGACCACTTCCCACCACTCTCATCACCCAGGTATATATATTTTTTCAAACTTCTCTGCATTATTTTCTTTCTTTAGCTTTCTGTTTCCTCAATTCAAACTCAATTTTCTTGTTTTGTTTTTCAGAGTTTCCATATTGGAGAGGGGTTTGAGCAAGATTGAGAATAAGTATACCCTCAAAATCAAATGCTTTGGCAATGGGATGGGAGATGATGGATATAAGTGGAGGAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGTAAATTCTTTCTTCTATACAATTCATATATATGAAGATATAATAATTCACCTTTTCTATTTCAACTTCTTTACATATTTGCTGGGAATTAAAACAGCTGCAGAGCTTTCCATGACTCTGTCCTCTTATGCATGTACAGTACTTTGCCATTACTTCAAAAGTCTTTCACTCAAAAACAAAAGGGACATCACATAGTTTTACACTCAGTGCACGTTTACATAAACTTTTCTATAAATATATCATGAATTAAAATTTACTTAACTTTTACCCATACTCTCGCATCTGAATTCAATTTTTTTCTATAAATAATTATTGAATCAAGAACTTGAATATGGTCCTTCTCATACAAGCTCATTTTCCTAAATACTAATAGAAAAACACTCTTTTCTTCACCCAGAAAATGCAGAGTGAATTTCTTGCTTCAATGTCATTAAACGCATCAACTCAGACCATATTATACTGTCTTTTATTCTCTCAAAACAGTTTAGTATACCATTGCAGATGGTTACAACTGGACTTAAAACACACTAATCAATCTGAAAGCCACTAAAAACTTCATAGTAATTAGTGGCAACCACATTTTAAGAAAAAGTACTGGTTACCAATTAGTGCGATTTTCACAATCAGATGGGGTTCTTTGTCTTTGTCGTTGTATCCAACATCTGCATGCATCTGAGAACTCTATGATATCTAATAGAGATGATATAGAAAAGGTAAGAGGGTGAGGAATATTTACACGTCACTACGTCAGTATGTTTCCTACGGTATTGCTGTCTTGTCACAACAAAAGATATGGCAAATTGGGTTGACAGTTTCATCACCAATTTAATTACCTCTAGGCCTAGCCAAGGTACCTAAAACATTCATTTTTTTCATCAAAAGCTACCCATGTTGTTGTGTTATGATTTGTGAGAGGCCTATTCATTGATCCATATATTGCCCGACAAATACAAGTTTAAGATTAAAAGCTACTTTAATAGAGGCAACAAACATGCATAGCAGATGTTCTATATATATATATATATATTGTTCAACATATCATGCCACTTTTCACGGCACCTCAGGCAAAGTAACGTTATGATGTTAAGTTTTTTCTGGATTAAACTCATATTTTATTATTGTTGTGTTTGTTGAATTAATTAGTACAAAGTTTAATTAAAAACCCATCACACATTAATTAGTACAAACCTTAATTATGCATTACTAATTTTAATGCCATGGAATCAGCAGGAGTTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAGGTTGAGAGATCCATTGAAGACCCAGACACTCTTATCATAACCTATGAAGGGCTCCACTTGCACTTTGCTTATCCATATTTTCTCATGGGCCAACCCGACCAATCTCAATCCCATCAACCCATCAAGAAGTCCAAGCCCACTTCTTCACAGGACCAAGCCCAAGCCCATATAGAAGATTATGTTCATGAGGCCCAATCAAGTGCCACTTCGGGTGTGCTGCCATCCACTTCATTGGACTCTCCACAAGACATGGCCCAGGAAAACTTGGGCTCACAAGGCTTGCTTGAAGACATGGTGCCATTCATGGTTCGGAACCCAGCAAACAGTGTGAGCAGTGCTCACACAAATTTTTCTTGTTCTTCGTTTCGTTCTCCTCCGACCTCACCTCTGTGGCTTAAATTCTAG