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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19536 LG5 8497765 8498252 hypothetical protein LR48
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   biological_process
Cellular Component   is active in   cellular_component
Molecular Function   enables   molecular_function
SNP Position Effect Amino acid change
C/A 8498149 missense_variant p.Ser101Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19536.1
MYMVTDDLVVIQMSSISAVSYINTLKVPLFDLEERVISIGVKEGLGILKASLTSTFALTEGLKHLITPIEEKNGSITSILFEVVKRILTNCNFDHNVFGLSMVVSPKLWCHSLHLSKVLFHVKDHNKTIISNAV*


CDS Sequence:
>Vu_19536.1
ATGTACATGGTAACCGATGACTTGGTTGTGATTCAAATGTCGTCCATTTCTGCTGTTTCATATATCAATACACTAAAAGTACCACTTTTTGACTTGGAGGAAAGGGTCATTTCAATTGGTGTGAAGGAGGGTCTTGGGATATTGAAAGCTTCATTGACCTCAACATTTGCTTTGACAGAAGGTTTGAAACACTTGATAACACCTATTGAAGAGAAGAATGGTTCAATCACTTCCATATTGTTTGAAGTTGTAAAAAGGATTCTCACCAACTGTAATTTTGACCACAATGTTTTTGGACTTTCCATGGTTGTATCACCAAAATTGTGGTGCCATTCGCTGCATTTGTCCAAAGTTCTCTTCCATGTCAAAGATCACAACAAAACTATTATTTCAAATGCAGTTTAA


Promoter Sequence:
>Vu_19536::LG5:8495765-8497765(+)
ACAACCACTCCTCCTTGCTCTCTGATGCAGTAAAACATTGGTGTTTTACTGCACTCATCACTACTCTGAAAGTGTGGTTTTGTGATAGCCTAGCCTGCACAACCATTCTCTTCTGTTGATTGAAAATACTAAGGCTGTTATTCTCCATTTTCATCACATATCCCTTCTGCAGTAGCTGTCCCAAGCTTAGCAGATTTGACTTTAAACCTGGTACATACAGTACCTCTTCAATTGTTACCTCTTTTCCTCCCACATCTCTTAGAACAACTCTGCCTGTACCTTCTGCAACCAGACTCCTATCATCAGCAAACCGAATCTTTCCATGTCCAGCACCTTGAATTCCTACAAACCAGTCTCTTCTCCCTGTCATGTGAGTAGAGCACCCAGAATCTAGGTACCACACATCATTTTCTGATGAATCTTCTTCAGTTTTAGCCATCAACATTACTGGTTCTGAGTCAGATTCCTCTTCTTGGGCCAAATTAGCCCTCTTCTTTGGTTTGTTCTTAGCACCTTCACCACTCCAGCAATCCTTGGCATAATGACCAAGTTTTTTACAGTTGTAGCACTTAACCTTCTTTTTGTCAAACTTCCAATCACCATTCTTCTGATTCTTCACCTGGCCTGATTCACTGGACTCTTCTCCTTGCTGATCCTGTGAATCTTTGCCCTGCCACCTTTCCTCCTTTCTTGAACCCCTTCTTGCCTTTCCACTGAGATGTGGCCTGTAAGGCCTGCTCCTGGCACTGTCTACGCTCATTGAGGCGTAACTCATGAGCCTCCAATGAATGCAGCAGCTCCTCAATGTCAATATTCTCCTTCCTTCGGGTTTCTTCAATGGCAGCTACTACATAGTCAAATCTGGCGGTTAAAGTCCTCAGAATTTTATCCACAACATACTCCTCCATCATCTTATCACCGTAAGCCCTCATCTTGTTTACTAGTTCTTGCACCTTATCAAAGTACTCAGCCACACTCTCACTTTCCCCCATGATCAAGGTTTCAAACTGCCTTCTTAGTGCATGCAGTTTAACCTTCGCATTTCTATCTCCATCACCATATGTTTTCACTAAAATGCCCCAGATCTCCTTTGCACTATCAGCATTTGAGATCTTGTTAAAAATCTTCTGGCTTACGCATTGATATATCAAAAATCTGGCCTTACTGTCCAGTTTTACCATCATCTTGTGCTCTTTCTTCTCTTCTTGAGATGCATTTTCACTCAATTCAGGCAATCCCTGTTCAATAACTTCCAGGACATCTTGAAACCCAAACACAGCCCGCATCTTGATTCTCCAATCATCAAACTGCTTGCCATCAAACATAGGTAATGGTCCCTGTATGCCTCCAAAGTTTGCCATCACAGTCTTGCAAACTTTCTTGCAGATTCTTTTCTAAAGTCACCTTCTTCTTCTTCTCTGGATACACATACCACCAGATAAAGCTCACGCACATCCAATAACTGTGCACGCACTCACTTCACACACCAGGATTCAGCCTAAGCTCTTGATACCATATTAAGTGAGGGGCAATAATGGAAAACCAACATTTAAACGTTATATTAAAAACGTATGTGCTGGCAAGAGAGAGAAAGACACTTTTCAAGATCTGAGGGTTAGAGAGAAGGCCGAGAGAAATCCCTCTTCTAAGGTTTCACACCACCACCACCACTGGCCGGAGAACAACACCACACTGATCGGAGCACTGGAGTTTAACAGAAAGAAGAACAGAGATACACAAGGTACTGAAAATTTCAACTCTTTTCATTAGTAATACTCTGAATGTTTACAGTATTATATACTAATCAATAAACGATTTTTCTGTTTTGTTTATTTTCTAATAGTTCTGACAGATATCTAATATCACAGGAACTCAAAGACAAACTAACTAACCCTGTATGTGCTCCACATTTTAACCTCAGCAACCAGATAATATTGTTGATCCTAAATCCTCTACTGGAGAGTCTTCAAGTATTCTTGGTTTTGTGAAAGGACCAATAA


Gene Sequence:
>Vu_19536(+)
ATGTACATGGTAACCGATGACTTGGTTGTGATTCAAATGTCGTCCATTTCTGCTGTTTCATATATCAATACACTAAAAGTACCACTTTTTGACTTGGAGGAAAGGGTCATTTCAATTGGTGTGAAGGAGGTAAGAAATTGTGGGGAATCTTACTTTGTATGCTGTTATTCTCGATATGAGATAATATCACACTCTTTGTTTGAATTGTGCAGGGTCTTGGGATATTGAAAGCTTCATTGACCTCAACATTTGCTTTGACAGAAGGTTTGAAACACTTGATAACACCTATTGAAGAGAAGAATGGTTCAATCACTTCCATATTGTTTGAAGTTGTAAAAAGGATTCTCACCAACTGTAATTTTGACCACAATGTTTTTGGACTTTCCATGGTTGTATCACCAAAATTGTGGTGCCATTCGCTGCATTTGTCCAAAGTTCTCTTCCATGTCAAAGATCACAACAAAACTATTATTTCAAATGCAGTTTAA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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