Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19515 LG5 8124724 8125665 PREDICTED: serine/threonine-protein kinase D6PK
Map

Annotations  
category   relationship type   keyword
Pathway   B 09191 Unclassified: metabolism   C 99980 Enzymes with EC numbers
SNP Position Effect Amino acid change
A/T 8124808 synonymous_variant p.Gly202Gly
C/T 8124809 missense_variant p.Gly202Asp
C/T 8124823 synonymous_variant p.Leu197Leu
C/T 8124833 missense_variant p.Arg194His
C/G 8125000 synonymous_variant p.Ala138Ala
G/A 8125001 missense_variant p.Ala138Val
A/G 8125055 missense_variant p.Phe120Ser
C/T 8125069 synonymous_variant p.Lys115Lys
A/C 8125091 missense_variant p.Leu108Arg
T/C 8125093 synonymous_variant p.Leu107Leu
T/C 8125122 missense_variant p.Asn98Asp
T/C 8125159 downstream_gene_variant
G/A 8125165 downstream_gene_variant
T/G 8125195 downstream_gene_variant
T/G 8125199 downstream_gene_variant
C/T 8125224 splice_donor_variant&intron_variant
C/A 8125231 missense_variant p.Arg94Ser
A/T 8125239 missense_variant p.Ser92Thr
G/A 8125264 synonymous_variant p.Tyr83Tyr
A/G 8125266 missense_variant p.Tyr83His
A/G 8125302 synonymous_variant p.Leu71Leu
G/T 8125312 synonymous_variant p.Ile67Ile
T/C 8125356 downstream_gene_variant
T/C 8125402 downstream_gene_variant
A/G 8125428 downstream_gene_variant
A/G 8125491 splice_region_variant&synonymous_variant p.Leu59Leu
G/A 8125536 missense_variant p.Pro44Ser
C/A 8125546 synonymous_variant p.Pro40Pro
G/A,T 8125550 stop_gained p.Ser39*
A/G,* 8125554 missense_variant p.Trp38Arg
G/A,* 8125555 synonymous_variant p.His37His
T/C 8125570 synonymous_variant p.Gly32Gly
C/T 8125578 missense_variant p.Glu30Lys
G/T 8125588 synonymous_variant p.Ala26Ala
G/A 8125589 missense_variant p.Ala26Val
A/G 8125610 missense_variant p.Leu19Pro
G/A 8125650 missense_variant p.Pro6Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19515.1
MVRRLPTSSWTLQLRNPTLRQTQKHAARREPGCHQRHWSPPSSPSVTVSTSPTLTPPILYLHMLGIIYRDLKPENVLVREDGYIMLSDFDLSLRCTPNYIWLSCFTLLFLSRKSKKDKKFKPKNDVHNQVTPLPKLIAEPTNARSMSFVGTNEYLAPEIINGEGHGSVVDWWTFGIFLYQLLFGRTPFKGPANRATLFNVIGEPLRFPESPTVSFAARDLIRGLLVKEP*


CDS Sequence:
>Vu_19515.1
ATGGTGAGGCGGCTGCCAACGTCTTCGTGGACACTGCAACTCAGAAACCCCACACTTAGACAAACTCAGAAGCACGCCGCGAGGCGTGAGCCAGGATGCCACCAGCGCCACTGGTCGCCGCCAAGCTCGCCGTCGGTCACCGTGTCAACATCACCAACGCTGACTCCTCCTATTTTGTACTTGCACATGCTAGGGATCATCTACAGAGACTTGAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTTACATAATGCTTTCAGACTTTGATCTCTCTCTAAGGTGCACTCCGAACTACATCTGGCTGTCGTGCTTCACACTACTCTTTCTATCCAGAAAATCCAAGAAAGACAAAAAGTTTAAACCAAAGAATGATGTGCACAACCAGGTGACCCCTCTTCCTAAGCTAATTGCGGAGCCAACAAATGCAAGATCAATGTCCTTTGTTGGAACAAACGAGTACTTGGCCCCAGAGATCATCAACGGTGAAGGGCATGGAAGTGTTGTGGACTGGTGGACATTTGGGATATTCCTGTATCAGCTTCTGTTTGGTAGAACACCATTCAAAGGTCCTGCAAACCGTGCAACTCTGTTCAATGTAATTGGTGAGCCTCTAAGGTTTCCAGAATCTCCAACTGTTAGCTTTGCTGCTAGAGATTTGATCAGAGGGTTGCTTGTGAAGGAGCCCTAG


Promoter Sequence:
>Vu_19515::LG5:8125665-8127665(-)
AATGAGATTCAATTAAGCAAAGTATCCAACTATTGTTTTTTCATCTTTGATGTCTTTATTAATCTTCTTCGTCTTAGGTATTCACATTCCTATCAAGACAACTTCATAATTACTTTTCTATAGGAAATAATCTTATATTTGTTTCTATCAATACAAGGCTTTTGTAATGAGCTTTGAGTTAATGCTTAATTATGAAATTATAAGGTCATAATTAATGTGTAATATATTTCCTTATCTTAAATTATTACTTATAGACTTTATGATGAGATTTTGATTAAGATCATTCTAATTATGGTCCAAACATAACTAATGGTGATTTAACCATATAGAATGATTTTGGAGTTAATATATGTTAACTCTTCCATTGATTTTCATAGTTTTTAAACCATTGGGTCTAATAGGATTGATCATCAAGTTGATAATTGACCTAACAGTTCACATTATTAAATATTTATGGTTTTCATTTTATTAATATTTTTATTTATGAATAATAAATAATTTGACCATAAATTGTTAATAATATCAATTTATTTTCTTTTAAAGGTGAACAACAATCATATTTTATTAAGTGTCATGACTATATTTTATTAATTGTCTCCATATGGCTACATTTGCCATTTAAAAATATAATAATTTTTCCTTTTCCTTTCATCTTTTAAAAGTACTCTTTTTTTTATTCCTGAGAATTTCTTCTTTCTAATTTTGAAATCTCGTAAATTTTTAAGAAGTTGGTGTAATACTATATAGAGGACTTGTGAGAGACATGTGTTTTGTGTGGAGAGTTTGACTCCTCATGTGTATGTGGATATCAAACAGCTGAAACATAAGAGTGTAGACTCACTTCATCAAAGTTACCAAAGCACCACAATACAACATGCAAATCACACAATATGAATCTGCATATTTGTGCCTGATAATATTTCTATTTATAGGTATCTTGAATAAGACTTGTAAATGCATGTACATTATTGTCTTTGTTTAAGATTGAAGTTTAAAGACATGAATTCATTGTAACTATAATAATAATAATAATAAAAACTTACTCAAATTAACATAATGACCACTAAAGAACTTAAATAAAGGTGTATACGATCTATTCCTAAGTACAAAAGGCTTATTTAGAAACGTGTGTTTCTAAAAGCCTGAAAATCACTACTGTTTAAACGTGGAAAAATTTAGTTCAACTCGACATCTTGATCATAATAAATATTTAGAATGATAATAAGTGAATAAATTATAAGACATTCATAATCTTATACAAATAAATCTCTCAAAATTTATGTACGAAGATATACTTAGAGAATAAACTAATTTATGTACGAACATATGTACCTAATTCAAATGTAATAAAAAGTTACTTTTTACCAAACAATGTTCTTAGAATGTAACGTAATATGCATATATCTTTCTTTCTCTTAAGTGTTTAGTTAACCCATGCATGCTCTTTTCAGCTCTTATAATACAAATTAGATTTTGTTTTCTCTCTCTTTTGTATACCTGAAATAGAATCATCTTAAAATATTTTTATGGTTTAAACCCTCCGTTGGTCCTCATTTTTGTATATGAAAATCTCAGTTCGATCCTCTTTTTTTCATCTGTCTCAATTGAGTTATATTTTTCGTAAAAATGAACATATTTTACCCTAACCGTTAACTGGTCTCAGACGGCGTTAAATTTAGCTTAGCTGTATTTTATGTTTTGATGATGTGGCATTGTGCATTAAATTGAATTGGTGATATGTTTTATAATCATCAAATCCACGTGGTGGCAACGGTGCTTCTTCTTCCCTCCAACCACTGATCACCTTTCACCGTCCAAACTGCTTCCTTCCAACTTCCACCCTCAAACCCTCACTCTCCCAATCCGAAACCCATTAGGGTTTTTCGCCTCTCCCACCAGACCAATTGGTCTCTGCATCCTTCACTTGAAACCAAAAGAGAACAGAGGAACCCTAGAAGCGCTCATCTCCTCCATTTATGTGCATCTCTTTGGTGGAGACC


Gene Sequence:
>Vu_19515(-)
ATGGTGAGGCGGCTGCCAACGTCTTCGTGGACACTGCAACTCAGAAACCCCACACTTAGACAAACTCAGAAGCACGCCGCGAGGCGTGAGCCAGGATGCCACCAGCGCCACTGGTCGCCGCCAAGCTCGCCGTCGGTCACCGTGTCAACATCACCAACGCTGACTCCTCCTATTTTGGTATATTATCTTCTATTATCTTGAACTTTGACAATGATGTATGATGTATCTTGATTTATTTGTCTGAATAATTCAATAAATGTACTATCACTTGTTAAATTAATAAAATTGATTTTTAGGTTTTATGTGGCAAAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTAGGGATCATCTACAGAGACTTGAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTTACATAATGCTTTCAGACTTTGATCTCTCTCTAAGGTGCACTGTCAGTCCAACTCTAGTGAAGTCATAAAAAAACTTGGAGACCAAAAGCTTAGGATACTACATTCAACCTTCCTGCATCGAGCCGACATGCGTGATGCAGCCGAACTACATCTGGCTGTCGTGCTTCACACTACTCTTTCTATCCAGAAAATCCAAGAAAGACAAAAAGTTTAAACCAAAGAATGATGTGCACAACCAGGTGACCCCTCTTCCTAAGCTAATTGCGGAGCCAACAAATGCAAGATCAATGTCCTTTGTTGGAACAAACGAGTACTTGGCCCCAGAGATCATCAACGGTGAAGGGCATGGAAGTGTTGTGGACTGGTGGACATTTGGGATATTCCTGTATCAGCTTCTGTTTGGTAGAACACCATTCAAAGGTCCTGCAAACCGTGCAACTCTGTTCAATGTAATTGGTGAGCCTCTAAGGTTTCCAGAATCTCCAACTGTTAGCTTTGCTGCTAGAGATTTGATCAGAGGGTTGCTTGTGAAGGAGCCCTAG