Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19485 LG5 7494741 7498323 PREDICTED: LRR receptor-like serine/threonine-protein kinase RCH1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 7495014 missense_variant p.Ser92Thr
A/C 7495034 synonymous_variant p.Ser98Ser
A/G 7495038 missense_variant p.Asn100Asp
T/G 7495127 missense_variant p.Phe129Leu
C/T 7495151 synonymous_variant p.Thr137Thr
A/T 7495255 missense_variant p.Lys172Ile
A/G 7495466 synonymous_variant p.Gly242Gly
C/A 7495797 missense_variant p.Leu353Ile
G/A 7495807 missense_variant p.Gly356Glu
T/A 7495994 missense_variant p.Phe418Leu
G/C 7495998 missense_variant p.Ala420Pro
T/C 7496113 missense_variant p.Phe458Ser
T/C,* 7496198 synonymous_variant p.Ser486Ser
T/A 7496263 missense_variant p.Leu508His
C/T 7496271 missense_variant p.Leu511Phe
C/A 7496410 missense_variant p.Thr557Lys
G/T 7496581 missense_variant p.Ser614Ile
A/T 7496583 missense_variant p.Asn615Tyr
C/G 7496631 missense_variant p.Leu631Val
G/A 7496651 synonymous_variant p.Leu637Leu
T/A 7496806 missense_variant p.Ile689Asn
C/T 7496807 synonymous_variant p.Ile689Ile
C/T 7497282 stop_gained p.Gln848*
C/G 7497350 downstream_gene_variant
A/C 7497504 downstream_gene_variant
T/C 7497656 downstream_gene_variant
T/A 7497719 downstream_gene_variant
A/T 7497743 downstream_gene_variant
G/A 7497954 downstream_gene_variant
C/T 7497955 downstream_gene_variant
C/A 7497963 downstream_gene_variant
G/A 7497966 downstream_gene_variant
T/A 7497999 downstream_gene_variant
C/T 7498008 downstream_gene_variant
T/A 7498014 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19485.1
MLVVEFLRELPMSMPRQALSNQNHNQMSRQAFITNHHHHLLRHLLLFALLLPLSFASNHEVTALVSWMHSSSKTPSAFSTWNPLDSNPCSWSFIKCSSANLVTEITIQNVELALPFPSKISSFSFLQIFVISGANLTGTISPDIGNCSELRVLDLSSNGLVGGIPSSVGRLKNLQNLSLNSNHLTGSIPSELGDCVNLRTLDIFDNSLSGDLPVELGKLSNLEVIRAGGNSGIVGKIPDELGDCRNLTVLGLAETKISGSLPASIGKLSMLQTLSIYSTMLSGEIPPEIGNCSELVNLFFYENDLSGSLPREIGMLQKLEKILLWQNNFVGDIPEEIGNCRNLKILDVSLNSLSGGIPQSLGKLSNLEELMLSNNNISGSIPPALSNLTNLIQLQLDTNQLSGSIPPGIGSLTKLTVFFAWQNKLGSGIPSSLGGCRSLEALDLSYNALTDSLPPGLFKLQNLTKLLLISNDISGPIPPEIGNCTSLIRLRLVGNRISGEIPREIGSLKSLYFLDLSENQLTGSVPFEIGNCKELQMLNLSNNSLSGALPSYLSSLTRLEVLDVSMNNFSGEVPMSIGQLTSLLRLILSRNSFSGPIPSSIGQCSGLQLLDLSSNNFSGSIPPELLQIEALDISLNLSHNALSGVIPPEISSLKKLSVLDLSHNNLEGDLTAFSGLENLVSLNISYNKITGYLPDTKLFHQLSATDLAGNQGLCPNGHDSCFVSSEAMTKMLNGTNSKRSEIIKLAIGLLSALIVAMTVFGVVTVFRARKIIQADNDSEMGGDSWPWQFTPFQKVNFSVEQVLKCLVESNVIGKGCSGIVYRAEMENGDIIAVKRLWPTAIAAKCDDQSDKLAVNGGGTLGVALLCVNSSPDDRPTMKDVVAMMKEIRQEREECVKVDLLLHASSANDQQERNISNSQHSNEARQLGFS*


CDS Sequence:
>Vu_19485.1
ATGCTTGTGGTTGAGTTTTTGAGGGAATTGCCAATGTCAATGCCGAGGCAAGCCTTGAGCAACCAAAACCACAACCAAATGTCGAGGCAAGCTTTCATCACAAACCATCACCATCACCTTCTTCGCCATCTTCTTCTCTTTGCACTTCTTCTTCCTCTTTCATTTGCTTCAAATCATGAAGTTACTGCATTGGTTTCCTGGATGCATAGCTCTTCCAAAACTCCTTCGGCCTTTTCTACTTGGAACCCTTTGGACTCCAATCCTTGCAGTTGGTCTTTCATCAAATGCTCTTCAGCAAACCTTGTCACCGAGATAACCATTCAAAATGTTGAGCTGGCCCTTCCCTTCCCTTCGAAAATCTCATCCTTTTCTTTCCTTCAAATATTTGTCATTTCTGGGGCTAACCTCACCGGGACTATCTCACCTGACATTGGAAACTGTTCTGAGCTTAGAGTCCTTGACCTTAGCTCCAATGGTCTTGTGGGTGGCATTCCTTCTAGTGTTGGGAGGCTCAAAAACCTCCAAAACTTGAGCTTGAACTCCAACCATCTCACAGGGTCAATCCCAAGTGAGCTTGGTGATTGTGTCAATCTCAGGACCCTTGATATTTTTGATAACAGTCTTAGTGGGGATCTTCCTGTGGAGCTAGGGAAGTTGTCAAATCTGGAGGTTATAAGAGCTGGAGGGAACAGTGGCATTGTGGGGAAGATTCCAGATGAGCTAGGAGATTGCAGAAATTTGACAGTGTTGGGTCTTGCCGAGACAAAAATTTCTGGTTCATTGCCTGCTTCAATAGGCAAGCTAAGTATGCTTCAGACCTTGTCTATTTATAGTACTATGCTCTCTGGTGAGATTCCTCCTGAAATAGGGAACTGTTCAGAGCTTGTCAACTTATTTTTTTATGAGAATGACCTCTCTGGTTCCCTACCAAGAGAGATTGGTATGCTTCAGAAGCTGGAAAAGATACTGCTGTGGCAAAACAATTTTGTTGGGGACATTCCTGAGGAAATTGGTAACTGCAGAAACTTGAAGATTCTTGATGTCTCTTTGAATTCTCTCTCAGGTGGAATACCCCAAAGTCTGGGGAAACTCTCAAATCTTGAAGAACTTATGTTGAGTAACAATAACATCTCTGGTTCAATACCACCAGCTCTGTCCAATCTCACAAACCTCATACAGTTGCAGCTGGATACAAATCAGCTGTCAGGTTCAATTCCACCTGGGATTGGAAGCTTGACAAAGCTAACAGTCTTTTTTGCTTGGCAGAACAAACTTGGAAGTGGCATTCCATCATCGTTGGGAGGCTGTAGAAGCCTTGAGGCTTTGGATTTGTCATACAATGCACTCACTGATAGCTTACCCCCAGGCCTGTTTAAACTTCAAAATTTAACAAAGCTTCTGCTAATATCTAATGATATTTCTGGCCCTATTCCTCCTGAGATTGGGAACTGCACTTCTCTCATTCGCCTCCGGCTTGTAGGCAACAGAATCAGTGGGGAGATACCAAGAGAAATCGGCTCTCTTAAGAGCCTTTATTTCCTTGATCTGTCTGAAAATCAGCTGACTGGGTCAGTACCATTTGAGATTGGAAACTGTAAAGAACTGCAAATGCTGAATCTAAGCAACAACTCCCTTTCTGGAGCTTTGCCTAGTTATTTGTCTTCTCTCACAAGGCTAGAGGTCTTGGATGTTTCTATGAATAACTTCTCCGGTGAGGTTCCAATGAGTATTGGCCAACTCACTTCACTTCTTAGACTCATCCTAAGTAGAAACTCTTTCTCTGGGCCAATTCCCTCCTCAATTGGGCAATGTTCAGGTCTTCAGCTGCTAGACCTTAGCAGCAACAACTTTTCAGGGAGCATTCCACCAGAACTGCTTCAAATTGAAGCACTTGATATTTCTCTAAATCTGAGTCACAATGCATTATCTGGAGTGATCCCACCAGAGATTTCTTCTCTGAAAAAGCTGTCAGTTCTAGACCTTTCACACAACAATCTTGAAGGTGACTTGACGGCCTTTTCAGGGCTCGAAAATCTTGTTTCTCTAAACATTTCCTACAACAAAATCACTGGTTATCTTCCAGACACCAAGTTATTCCATCAACTATCAGCAACAGATTTGGCTGGAAACCAAGGTTTGTGTCCTAATGGTCACGATTCTTGTTTTGTTAGCAGTGAGGCTATGACAAAAATGCTGAATGGTACTAATTCTAAAAGGTCAGAGATAATCAAACTGGCTATTGGGCTGCTCAGTGCCTTGATTGTTGCAATGACAGTCTTTGGAGTTGTTACTGTCTTTCGAGCAAGGAAAATCATTCAAGCAGACAATGATTCTGAGATGGGAGGAGATTCATGGCCTTGGCAGTTCACCCCATTCCAAAAGGTAAACTTCTCTGTGGAGCAAGTCTTAAAGTGTTTGGTGGAATCCAATGTAATTGGAAAGGGGTGCTCAGGGATTGTTTATCGTGCCGAAATGGAAAATGGGGATATCATTGCCGTGAAAAGACTATGGCCAACAGCAATAGCTGCAAAATGTGATGATCAAAGCGACAAGTTAGCAGTTAATGGTGGAGGGACCTTAGGAGTGGCTTTGCTGTGTGTGAACTCAAGCCCAGATGACAGACCAACCATGAAAGATGTTGTAGCAATGATGAAGGAAATTAGGCAGGAGAGAGAGGAATGTGTTAAAGTTGACTTGCTTCTTCATGCATCTTCTGCAAATGATCAACAAGAAAGAAATATTTCAAATAGCCAACATAGCAATGAGGCTAGGCAACTAGGATTTTCTTAG


Promoter Sequence:
>Vu_19485::LG5:7492741-7494741(+)
AGTGAAAAAATATTACTTTTTACACTCCATCAAATTTCTTCCTTCACTCTATTACAATTACCTAAATAAAATCCTCTGTTTTAAGTATATACCCACTCTTGATTTTTTAATATTTTTTAAAATATACTGATTTTAATAAATTAATATTTTTTAATATGTTTTAATATATTAGATTTAGTATATATTAATGTATTTTAAAGACAGAGCAAATAAATAACATTCAAAACTCAGTAGAAAACCCTAATTCGTATCATATATTGAAAATCATTATATTTCTAGTATACTCTTACTCTTCTACCTCACTAGCTAGAGAAGATAGTTTTCATCTCTAATTATCTTATATAAAAAAAATATCTATACCCTAAAAAGTAGAGTCATATGGCCACTATTGCCTATAATAATTATTCTGATCTTGTTGACTGTGTTGAGAGGTTATGGTTCTTTGTTTGAGAATCAAACATTGATGATTAGGTTAAAAGGTGAAGAGGTGAGAGCAATGCATGTCCAAATCTACCTTAAAAATGTCACCTAGAAAAGTGGATTCCCTTATGAATGCCACTGCCAGTTATCAACAACACTCATATGCTTGCAATTATTGGAAACAAAAGGGCACAAAGGAAATTTTTAAAATAATTTCAATCACAAACTGTCAGCATATATATATATTTAGGTCTCATAAAAAAAATGGAACCAGGTTGAAGATAATGTTTGTCCTAAGTTGAAAACTATTCTCATAGTGTAATAATTGGAGTGGAAGTAATAAAATTGAACTGTCACTATCCAAACTTCGGATTTTTTTTTCATTTAATTTTTTTGTACATTTTTGTGGTACAAATTGTGTTATGATTTGAAGATATTTGTCTTTTTTTAATAAATCTAGTTCTAAGCAAAAATAAATTTACGATGAGTGGTCATATCAAGACCAAGACTTCAAAGAAAAGAAAATTAATTATTAGGTGATCTTAAAATAATGCCATCTAGATTAATTACAATATGGTCCACAATTACATATATTGTAATTCTTCTTATGTTACATACCCTTTCGTTTCCATTCTAAATGTCATATTAATTTTACAAAAAATTAACTATTTTTTAGTTATACATCTTATTTTAATTATATAGGAGAAAGGACAATCAGTAATGATAAAAAAATATATAATGACATGCAAATATATATTGAAATAAAAAGACTGAAAAGAAGTATGTTAATCACTTAAAATTATACTAAAAATAGAAAATTAAATAACTTTCTTAGTTAGGGTGAAAAATATCCTTCAACTCCTAAAACAAAGGAATAAAAGGAATATATGGGATGTTGTTTAAGAAAAACACATTATCTACAATATATTATTATCTTCATTTTCTAAATAGGTAACTCATTGAGATTATATTATAAATAAAGTATTAAACAGTTTCTTTAGTTTTTGATGAAAAAAAAGTTGATATTATAAAGAAATAGAGTAAATAATTAAACTCAAATAATATATGGTTTCATCATGTAGCAGTAGCATTTTTTTATGTTGACGAAGATGCTTGAAAAGCAATTGTAATAATCTGGAAAATGCAAGGGGAATCTGCTTTGAATGAAGGTTTGGAAAGAAGGAGGAAATGGCAGAAAGTAGAGCAACAAGTCTTTCAAATTAAAGAAGAAGCTCGTTTATCAACACAATATATAAATGATGCAGGCCAAGTTAGTGACTAAGTTGAGGAAAACAATGCAATAACACATGGGTTATTAACTAGTTTAGTGCCAAACAAGTCATGCACAATTCAATGCCAGAGAAAATATTAGGCAAAAGAACAGAACCCCGAGGCGGAGGGGATGGTGCTTGTTCACTTCAAAATCGTATAAAATAATACCGTCTCTTTTTCTTGCTTTACTACAAAGCAAGAATAATAGTAATCCTAGAAACTATGGTGGCACAAGAGTTAGTGAGTCTTAAAAAAGAGAGAGAGAGACCCAATGCAAAACTAAGAGTTGTTGATAGCTTGATATGATA


Gene Sequence:
>Vu_19485(+)
ATGCTTGTGGTTGAGTTTTTGAGGGAATTGCCAATGTCAATGCCGAGGCAAGCCTTGAGCAACCAAAACCACAACCAAATGTCGAGGCAAGCTTTCATCACAAACCATCACCATCACCTTCTTCGCCATCTTCTTCTCTTTGCACTTCTTCTTCCTCTTTCATTTGCTTCAAATCATGAAGTTACTGCATTGGTTTCCTGGATGCATAGCTCTTCCAAAACTCCTTCGGCCTTTTCTACTTGGAACCCTTTGGACTCCAATCCTTGCAGTTGGTCTTTCATCAAATGCTCTTCAGCAAACCTTGTCACCGAGATAACCATTCAAAATGTTGAGCTGGCCCTTCCCTTCCCTTCGAAAATCTCATCCTTTTCTTTCCTTCAAATATTTGTCATTTCTGGGGCTAACCTCACCGGGACTATCTCACCTGACATTGGAAACTGTTCTGAGCTTAGAGTCCTTGACCTTAGCTCCAATGGTCTTGTGGGTGGCATTCCTTCTAGTGTTGGGAGGCTCAAAAACCTCCAAAACTTGAGCTTGAACTCCAACCATCTCACAGGGTCAATCCCAAGTGAGCTTGGTGATTGTGTCAATCTCAGGACCCTTGATATTTTTGATAACAGTCTTAGTGGGGATCTTCCTGTGGAGCTAGGGAAGTTGTCAAATCTGGAGGTTATAAGAGCTGGAGGGAACAGTGGCATTGTGGGGAAGATTCCAGATGAGCTAGGAGATTGCAGAAATTTGACAGTGTTGGGTCTTGCCGAGACAAAAATTTCTGGTTCATTGCCTGCTTCAATAGGCAAGCTAAGTATGCTTCAGACCTTGTCTATTTATAGTACTATGCTCTCTGGTGAGATTCCTCCTGAAATAGGGAACTGTTCAGAGCTTGTCAACTTATTTTTTTATGAGAATGACCTCTCTGGTTCCCTACCAAGAGAGATTGGTATGCTTCAGAAGCTGGAAAAGATACTGCTGTGGCAAAACAATTTTGTTGGGGACATTCCTGAGGAAATTGGTAACTGCAGAAACTTGAAGATTCTTGATGTCTCTTTGAATTCTCTCTCAGGTGGAATACCCCAAAGTCTGGGGAAACTCTCAAATCTTGAAGAACTTATGTTGAGTAACAATAACATCTCTGGTTCAATACCACCAGCTCTGTCCAATCTCACAAACCTCATACAGTTGCAGCTGGATACAAATCAGCTGTCAGGTTCAATTCCACCTGGGATTGGAAGCTTGACAAAGCTAACAGTCTTTTTTGCTTGGCAGAACAAACTTGGAAGTGGCATTCCATCATCGTTGGGAGGCTGTAGAAGCCTTGAGGCTTTGGATTTGTCATACAATGCACTCACTGATAGCTTACCCCCAGGCCTGTTTAAACTTCAAAATTTAACAAAGCTTCTGCTAATATCTAATGATATTTCTGGCCCTATTCCTCCTGAGATTGGGAACTGCACTTCTCTCATTCGCCTCCGGCTTGTAGGCAACAGAATCAGTGGGGAGATACCAAGAGAAATCGGCTCTCTTAAGAGCCTTTATTTCCTTGATCTGTCTGAAAATCAGCTGACTGGGTCAGTACCATTTGAGATTGGAAACTGTAAAGAACTGCAAATGCTGAATCTAAGCAACAACTCCCTTTCTGGAGCTTTGCCTAGTTATTTGTCTTCTCTCACAAGGCTAGAGGTCTTGGATGTTTCTATGAATAACTTCTCCGGTGAGGTTCCAATGAGTATTGGCCAACTCACTTCACTTCTTAGACTCATCCTAAGTAGAAACTCTTTCTCTGGGCCAATTCCCTCCTCAATTGGGCAATGTTCAGGTCTTCAGCTGCTAGACCTTAGCAGCAACAACTTTTCAGGGAGCATTCCACCAGAACTGCTTCAAATTGAAGCACTTGATATTTCTCTAAATCTGAGTCACAATGCATTATCTGGAGTGATCCCACCAGAGATTTCTTCTCTGAAAAAGCTGTCAGTTCTAGACCTTTCACACAACAATCTTGAAGGTGACTTGACGGCCTTTTCAGGGCTCGAAAATCTTGTTTCTCTAAACATTTCCTACAACAAAATCACTGGTTATCTTCCAGACACCAAGTTATTCCATCAACTATCAGCAACAGATTTGGCTGGAAACCAAGGTTTGTGTCCTAATGGTCACGATTCTTGTTTTGTTAGCAGTGAGGCTATGACAAAAATGCTGAATGGTACTAATTCTAAAAGGTCAGAGATAATCAAACTGGCTATTGGGCTGCTCAGTGCCTTGATTGTTGCAATGACAGTCTTTGGAGTTGTTACTGTCTTTCGAGCAAGGAAAATCATTCAAGCAGACAATGATTCTGAGATGGGAGGAGATTCATGGCCTTGGCAGTTCACCCCATTCCAAAAGGTAAACTTCTCTGTGGAGCAAGTCTTAAAGTGTTTGGTGGAATCCAATGTAATTGGAAAGGGGTGCTCAGGGATTGTTTATCGTGCCGAAATGGAAAATGGGGATATCATTGCCGTGAAAAGACTATGGCCAACAGCAATAGCTGCAAAATGTGATGATCAAAGCGACAAGTTAGCAGTTAATGGTGGAGGGGTACGTGATTCCTTTTCAGCTGAGGTAAAAACTCTCGGTTCAATTCGCCACAAGAACATTGTAAGGTTCTTGGGTTGCTGTTGGAACAGAAAGACAAGGTTGCTTATGTATGATTACATGCCAAATGGGAGTCTAGGAAGTCTGCTTCATGAACGAAGTGGAAACTGCTTGGAATGGGACATAAGGTTTAGGATAATACTAGGAGCAGCACAAGGTGTGGCTTATTTGCACCATGATTGTGCTCCTCCTATTGTTCATAGGGACATCAAGGCCAACAACATTCTCATAGGCCCTGAATTTGAACCATACATAGCTGATTTTGGGCTTGCAAAACTTGTTGATGATGGAGATTTTGCTCGATCTTCTAGCACACTAGCTGGTTCCTATGGTTACATTGCTCCTGGTTAGTATAGTACTACTATCCCAATACTTCAATTAAATATTGTGTTACTTTTATCACTCACCATTAAGGAGAGTCTGAACTTTTATTTAACATTCTCTGTCTGAATATGCTATCTCTCATAACTGTATACTGACATCTATACATTATTACCTTTTTCTGTATCTGGGGATTGAAGAGTATGGGTACATGATGAAAATAACAGAGAAAAGTGATGTTTATAGCTATGGCATTGTTGTGCTAGAAGTCCTGACAGGGAAGCAACCAATTGATCCAACAATACCTGATGGACTCCACATTGTTGATTGGGTAAGACAGAAAAGAGGTGGAGTTGAAGTGGTGGATGAAAGCTTGAGAGCTCGGCCAGAATCCGAAATTGAGGAAATGTTGCAGACCTTAGGAGTGGCTTTGCTGTGTGTGAACTCAAGCCCAGATGACAGACCAACCATGAAAGATGTTGTAGCAATGATGAAGGAAATTAGGCAGGAGAGAGAGGAATGTGTTAAAGTTGACTTGCTTCTTCATGCATCTTCTGCAAATGATCAACAAGAAAGAAATATTTCAAATAGCCAACATAGCAATGAGGCTAGGCAACTAGGATTTTCTTAG