Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19483 LG5 7454621 7457780 PREDICTED: putative kinase-like protein TMKL1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, embryo development ending in seed dormancy, gametophyte development, meiotic cell cycle process, shoot system development, macromolecule modification, embryo development ending in seed dormancy, protein phosphorylation, pattern specification process, embryo development ending in seed dormancy, embryo development ending in seed dormancy, cell division, anatomical structure formation involved in morphogenesis, protein phosphorylation, meiotic cell cycle process, meiotic cell cycle process, protein phosphorylation, embryo development ending in seed dormancy, shoot system development, protein phosphorylation, meristem development, protein phosphorylation
Cellular Component   located in   plasma membrane, plasmodesma, plasma membrane
Molecular Function   enables   protein kinase activity, ATP binding, protein kinase activity, kinase activity, protein kinase activity, ATP binding
SNP Position Effect Amino acid change
T/A 7454733 3_prime_UTR_variant
G/A 7454890 missense_variant p.Pro667Leu
T/A 7455130 missense_variant p.Lys587Met
G/A 7455537 upstream_gene_variant
T/A 7455873 upstream_gene_variant
C/T 7455875 upstream_gene_variant
A/G 7456132 upstream_gene_variant
C/T 7456863 synonymous_variant p.Gly256Gly
A/G 7456866 synonymous_variant p.Ala255Ala
C/A 7456927 missense_variant p.Gly235Val
C/A 7456985 missense_variant p.Asp216Tyr
T/A 7457000 missense_variant p.Asn211Tyr
G/T 7457157 synonymous_variant p.Ser158Ser
G/T 7457255 missense_variant p.Leu126Ile
G/A 7457527 missense_variant p.Ser35Phe
C/A 7457560 missense_variant p.Cys24Phe
G/*,C 7457689 5_prime_UTR_premature_start_codon_gain_variant
G/*,C 7457691 5_prime_UTR_premature_start_codon_gain_variant
G/*,C 7457695 5_prime_UTR_premature_start_codon_gain_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19483.1
MAFLKPFSLYISMSLLFFLFFCFCKASTTTTKSLSPSPSTSSDVELLLGKIKASLQGNSDNLVLSSWNSSIPLCQWRGLKWVFSSGTPLSCTDLSSPQSTNLTLHKDPSLHLLSLQLPSANLSGSLPRELGGFPMLQSLYLNINSLQGAIPLELGYSSSLSDIDLSDNMLSGVLPPSIWNLCDRLVSIRLHGNSLSGSVSEPALPNSSCKNLQLLDLGGNKFSGSFPEFLTKFGGLNQLDLGNNLFMGTIPQSLAGLKLEKLNLSHNNFSGVLPFFGESKFGVDAFEGNSPGLCGPPLASCARTSALSSGAVAGIVISLMTGAVVLASLLIGYMQNKKRKGSGESEDELNEEEEDEENGGNAICGAGEGKLMLFPGGENLTLDDVLNATGQVLEKTCYGTAYKAKLADGGTIALRLLREGSCKDRASCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEPKAGKPVLNWARRHKIALGIARGLAYLHTGLEVPITHANVRSKNVLVDDFFAARLTDFGLDKLMIPSIADEMVAQAKTDGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSVTPF*


CDS Sequence:
>Vu_19483.1
ATGGCGTTTCTCAAGCCTTTCTCTCTCTACATTTCCATGTCCTTGTTGTTCTTCCTCTTCTTTTGCTTCTGCAAAGCCAGTACTACCACCACAAAGTCATTGTCCCCTTCACCATCCACTTCCTCTGATGTTGAACTTCTCTTGGGAAAAATCAAAGCTTCACTGCAAGGTAACTCTGACAACCTTGTTTTGTCGTCATGGAACTCCTCTATCCCACTTTGTCAGTGGAGAGGTCTCAAGTGGGTGTTCTCCAGTGGCACTCCTCTTTCATGCACTGACTTGTCTTCTCCACAATCTACCAACCTTACACTCCACAAGGACCCTTCTCTTCACTTGCTTTCTCTTCAGCTCCCATCAGCAAATCTCTCTGGTTCCCTCCCCAGAGAGCTCGGGGGGTTCCCTATGCTTCAAAGTCTTTACCTTAACATAAATTCATTGCAGGGAGCCATCCCTCTTGAGCTTGGCTACAGCTCCTCCCTCTCTGACATTGATTTGAGTGACAATATGCTAAGTGGGGTTCTTCCTCCGTCCATTTGGAACTTGTGTGACAGGCTTGTTTCCATTAGGCTCCATGGTAATTCACTATCTGGGTCTGTTTCTGAGCCTGCATTGCCCAACTCATCCTGCAAGAATTTGCAGTTGCTTGATTTAGGAGGCAATAAGTTTTCCGGGAGTTTCCCTGAGTTCCTAACAAAGTTTGGTGGGCTAAATCAGCTTGACTTGGGGAACAACTTGTTCATGGGTACAATTCCTCAAAGCCTTGCTGGGCTAAAGCTTGAAAAATTGAATCTTTCCCACAATAACTTCAGTGGGGTTTTGCCTTTCTTTGGAGAATCCAAGTTTGGTGTGGATGCTTTTGAGGGGAATAGCCCTGGTTTATGTGGACCACCTTTGGCAAGCTGTGCTAGGACCTCAGCACTGAGTTCTGGTGCAGTTGCTGGCATTGTTATTAGTCTGATGACGGGAGCTGTGGTTTTAGCCTCTTTGCTGATTGGGTATATGCAGAACAAGAAGAGGAAGGGGAGTGGAGAGAGTGAAGATGAGTTGAATGAGGAAGAGGAAGATGAAGAGAATGGTGGTAATGCTATATGTGGAGCTGGTGAAGGGAAGCTTATGTTGTTCCCTGGAGGTGAGAATTTGACATTGGATGATGTGTTAAATGCAACTGGGCAAGTGTTGGAGAAGACTTGTTATGGGACAGCTTATAAGGCTAAGCTTGCTGATGGAGGCACAATTGCTTTGAGATTGTTGCGAGAAGGTAGCTGCAAAGATAGGGCTTCATGTTTGTCAGTTATAAAGCAATTGGGAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATCTATGACTATCTGCCTCTCAGAACCCTTCATGATCTTTTACATGAACCTAAAGCCGGAAAACCAGTACTGAACTGGGCCAGACGACACAAGATTGCATTAGGCATAGCGAGAGGTCTAGCCTATCTTCACACAGGACTAGAAGTTCCTATCACTCATGCAAATGTAAGGTCGAAGAATGTGCTTGTGGATGACTTCTTTGCAGCAAGGCTAACTGATTTTGGCCTGGACAAGCTGATGATTCCTTCCATAGCAGACGAAATGGTGGCGCAGGCCAAGACCGACGGCTACAAGGCTCCGGAGCTTCAAAGAATGAAGAAATGCAGCTCGAGGACGGATGTCTATGCTTTTGGCATACTACTGCTTGAAATCTTGATTGGGAAGAAGCCTGGGAAGAATGGAAGAAGTGGTGAGTATGTGGACTTGCCCTCAATGGTGAAGGTGGCAGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAACTGTTGAAAGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAGGCATTGAAGCTGGCAATGGGGTGCTGTGCACCTGTGGCATCTGTGAGGCCAAGCATGGATGAAGTTGTGAGGCAGTTGGAAGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGCAGTGTTACACCATTTTGA


Promoter Sequence:
>Vu_19483::LG5:7457780-7459780(-)
GTACCTACTTATATATTTAAAATTTGACCAAATCTTTAGTTGATGTGAAATTTTCAATACATACCTCTCACTCATTGCATATACATCTTGAACATGAGACTTAACTGTTTGATAACAGATAGAATAATAGACTCAACAAACAACAAATTTTATTATGATAAGCTCTAATTCATGGTTTTGATATCATTTTAAGAAGTAGACTTTATGTATATAATTTCAATTTATGTAAGAAATTTATATCCATTTATATACAATAAATTGATTTTATCTTTAGTCAATGTAAAACTTTCAATAACTACTAAATCAAAAATTATAGTTAATAGTAAAAAAAACAATGTTTTTATTCTTTTTATTTAACAACAACGTGATAAAGTAATATAACTATTTAATTGTAAATCAATCTATGTAACCTTTATTACATAATAATTATTGCAAAAAAAAAGCACCTTATCGTAAATAAATTCCTCAATAAACCACTAAACTTATAAAGCTCTTGATTTATGATATTTATCATTAAAGTAAAAACTAAATAAGTCGTTTTAAGATCTTATATCCTTAAAGCCTAAAACAGGTAAGCATATGATTTTAAAATAAGATGTTTTAAGGATATATTAGAATTATATATGCTCTTTCATATTGCTGCACTTATTTATATTTCATTTTTTAATAATTTCCATTGCACTTTCATTCCCAGCCTAGGTCACTGTAGTGAGTGCACCCTTTAGCTTACGAACTATTCTTTCATCAGACATGGATTCACCTTTTTCTTGTTTTTTCTTCTCTTCAATCTTCACTATCATTATCTCTTCTTTTCTATTATTCTATGGCCCACAAGACATGGAATCCATTGCGCCCGAAAATGCACATCCAGTGCATGCTCTTTCATACAAACCCACCTCATATCCAATCACATGATGCCATTCAAAACTAATAAAGGACACGTGTACGGTGATAGGAGCATGGGTCTGAGAGGACCAGGTGGGATTGGGGGTTCACAATCTCTGCCTTGAAATGACAAGAAAGAGGTAGTAGCTTCTTGCATAGAAAACCTTACCTTCCTCAAAGGGTGCAAAGTGCAATATTAAACTTGTAGGCCATTTTACAAAAGTAAGCGTGCAGAAGCAAATAAATAATAACACAAGACTTGCAAAAAAGCAAAAGGGAAAAAATCATTGAATATTCTTATTGTCCAAAACATCATTTTTGAGAATTTTAATATCGTCTAGGAGAGATTCGATTAACTCTTTTACCTTCTCTATCATTCAAATATTAAATAATAAACTTTAAGTAAAGTTGTTTTCTGAATCAAATTAGACAATTTTAACAAATCTACAGCCTCATGCAAATTCACCTTTCTTGCTAAAACATGGGATGTTTACCTTAAAATGAAACACTGTTGTTTAATCATATTTTTTTAATTTCCATTTATCCCATGAATATTATATAATACTATGTATACATTTAATAGATTTTATGCAAAAAATGTATTGTTTTTATACAATAGTAACTGAACAATTCAACTTAATACTTTTTTTAAACGACAAACTCATATTTTATTTCAATGATACAACACTCAAGTGGCTTATTTTTTTATTTTCATATTAATTTAATTTTCAATTAAATATTTTAAACAACAAGTTACTTTTTTATTTATAAGAAGTGACTCTTTATATAAAGAAAACCACGCCTAATTCCTTAATTTAAGCAATGAAATAAAAAATTCTTTGAAAATCTATCACGAACCTATATTAAACTTTTAATACAGTCATTATTATGAATATAAAAACGACAGTGAGAAAGTAGGAAATTAATTCCGAAACACCTATTAAGTAATAGTACAATTTAAATAAAAGAAATGAATGTTTCGCCTGGTATAGTTATAAAATAAAAAAACATTAAGCGGTGCATGATTTGTAGAATTGCATCATAGCCGTTGAATGAACATAGCATGAGACACTGACAGAGACCTTAACCTCACAACACTGGTTACACTCTCAGTC


Gene Sequence:
>Vu_19483(-)
AACAGCGTGTCAGCTTTCCCAGAAAAGAGAGCCTCTTTCTTTGAACTTCTCACACAACACTTACAACCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTGTCTCTCCCTTTCTCTTTCTGCTTCGCTATAGTTCATGGCGTTTCTCAAGCCTTTCTCTCTCTACATTTCCATGTCCTTGTTGTTCTTCCTCTTCTTTTGCTTCTGCAAAGCCAGTACTACCACCACAAAGTCATTGTCCCCTTCACCATCCACTTCCTCTGATGTTGAACTTCTCTTGGGAAAAATCAAAGCTTCACTGCAAGGTAACTCTGACAACCTTGTTTTGTCGTCATGGAACTCCTCTATCCCACTTTGTCAGTGGAGAGGTCTCAAGTGGGTGTTCTCCAGTGGCACTCCTCTTTCATGCACTGACTTGTCTTCTCCACAATCTACCAACCTTACACTCCACAAGGACCCTTCTCTTCACTTGCTTTCTCTTCAGCTCCCATCAGCAAATCTCTCTGGTTCCCTCCCCAGAGAGCTCGGGGGGTTCCCTATGCTTCAAAGTCTTTACCTTAACATAAATTCATTGCAGGGAGCCATCCCTCTTGAGCTTGGCTACAGCTCCTCCCTCTCTGACATTGATTTGAGTGACAATATGCTAAGTGGGGTTCTTCCTCCGTCCATTTGGAACTTGTGTGACAGGCTTGTTTCCATTAGGCTCCATGGTAATTCACTATCTGGGTCTGTTTCTGAGCCTGCATTGCCCAACTCATCCTGCAAGAATTTGCAGTTGCTTGATTTAGGAGGCAATAAGTTTTCCGGGAGTTTCCCTGAGTTCCTAACAAAGTTTGGTGGGCTAAATCAGCTTGACTTGGGGAACAACTTGTTCATGGGTACAATTCCTCAAAGCCTTGCTGGGCTAAAGCTTGAAAAATTGAATCTTTCCCACAATAACTTCAGTGGGGTTTTGCCTTTCTTTGGAGAATCCAAGTTTGGTGTGGATGCTTTTGAGGGGAATAGCCCTGGTTTATGTGGACCACCTTTGGCAAGCTGTGCTAGGACCTCAGCACTGAGTTCTGGTGCAGTTGCTGGCATTGTTATTAGTCTGATGACGGGAGCTGTGGTTTTAGCCTCTTTGCTGATTGGGTATATGCAGAACAAGAAGAGGAAGGGGAGTGGAGAGAGTGAAGATGAGTTGAATGAGGAAGAGGAAGATGAAGAGAATGGTGGTAATGCTATATGTGGAGCTGGTGAAGGGAAGCTTATGTTGTTCCCTGGAGGTGAGAATTTGACATTGGATGATGTGTTAAATGCAACTGGGCAAGTGTTGGAGAAGACTTGTTATGGGACAGCTTATAAGGCTAAGCTTGCTGATGGAGGCACAATTGCTTTGAGATTGTTGCGAGAAGGTAGCTGCAAAGATAGGGCTTCATGTTTGTCAGTTATAAAGCAATTGGGAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATCTATGACTATCTGCCTCTCAGAACCCTTCATGATCTTTTACATGGTTTGTTCAACATACTATCTTCCACTAATGCATTTCTTGTTATTGTTTCTATATTTCAATCATACACTTGCACAATGACAATTCAAATTGCACTGCTACTGTAATTTCATTTAAACCATTGAAAACCGTCTTCATAAATTGAAGAGTGAAATCATCACATTTTTCATTGTCTGACTAGAAGTGTGTTTATTAGTATTTCTTCAACTAAAAACTTCTCTAGGCCTAAAGAGAAAAGAAATTATACCTGCTGTTAGATCTCTGAACAATCATGATATCTATTGCAAGAAACACTTGAAATGGGGTGCTGATGAATTTTAAGCCTAAAGAAAAAAGAAACTATACCTGCTGTCAGATCTTTGAACAATCATGATATCTATTATAAGAAACTCCTGAAACGGGGCTGTTCTTATACGTGGAGCATCCTCTGCTTGTCATTCTGGATCTCCCAGTGCAGAAAATTCATAATCCAAAATCAATAACTATGTAAAAACAAGAAGTTGCATCCTTCCTTATATCTGTAATGTAATCATATATGAATATTTATGCAGCCTATCAATAGAGTGCTGATATGTCATTGTTGAAGGTTATCCTTGTATAATTTGTCTAATTTCTGGAGCATCACACTGAATTTAAATGAAAAGTTTCACTGGTGAACATAGATGGTAGTTTGCGTTTTTCAAACTTAACAATTTCACTGCAGCTTGGCATTGATCATTATGTTGTTATTTTAATTTTCCACAGAACCTAAAGCCGGAAAACCAGTACTGAACTGGGCCAGACGACACAAGATTGCATTAGGCATAGCGAGAGGTCTAGCCTATCTTCACACAGGACTAGAAGTTCCTATCACTCATGCAAATGTAAGGTCGAAGAATGTGCTTGTGGATGACTTCTTTGCAGCAAGGCTAACTGATTTTGGCCTGGACAAGCTGATGATTCCTTCCATAGCAGACGAAATGGTGGCGCAGGCCAAGACCGACGGCTACAAGGCTCCGGAGCTTCAAAGAATGAAGAAATGCAGCTCGAGGACGGATGTCTATGCTTTTGGCATACTACTGCTTGAAATCTTGATTGGGAAGAAGCCTGGGAAGAATGGAAGAAGTGGTGAGTATGTGGACTTGCCCTCAATGGTGAAGGTGGCAGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAACTGTTGAAAGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAGGCATTGAAGCTGGCAATGGGGTGCTGTGCACCTGTGGCATCTGTGAGGCCAAGCATGGATGAAGTTGTGAGGCAGTTGGAAGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGCAGTGTTACACCATTTTGAGGTTTCAGTTCAACATGCTTATTAATCAAACTATTGATTTTCACTTACTACTTACGTTGTGTTTTCCTCTTTTTCTCATCTGAATGAGAGGGAAGTTTATGATGGTCTAGAGAATGCTGTAATTTTTTGTTTTTCTTTTCTCCATAACTCTTTGCTTTAGGTAGCCCCTATTGTTTTTTAAATCAAATATAGTCACACAATTATG