Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19457 LG5 6844591 6846684 PREDICTED: serine/threonine-protein kinase At3g07070
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, phosphorylation, protein phosphorylation, phosphorylation
Cellular Component   located in   nucleus
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/C 6845168 missense_variant p.Arg269Gly
T/C 6845304 synonymous_variant p.Gln223Gln
C/T 6845311 missense_variant p.Arg221Lys
A/T 6845471 upstream_gene_variant
G/A 6845476 upstream_gene_variant
A/G 6845541 splice_region_variant&synonymous_variant p.Leu171Leu
T/C 6845553 synonymous_variant p.Glu167Glu
T/C 6845735 splice_region_variant&intron_variant
A/G 6845765 upstream_gene_variant
A/G 6845794 upstream_gene_variant
A/G 6845798 upstream_gene_variant
G/T 6846310 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19457.1
MSCFSCFSSSKAAKPSNNGKRMPQPTSHSPNESAQSLPENHNYKAKTNHQTEPKIEKEVKKDKENNNIAAQTFTFRELANITKNFRQECLIGEGGFGRVYKGKLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHKNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLEPRQKPLEWFHRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDREFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGKLTVQSDVYSFGVVMLELITGRRAIDNTRKPHEQNLVNWAEPIFKEPNRYSELADPVLEGKFPVRSLNQAVAIAAMCLNEEPSVRPLISDVVTALSFLGTIPKGEEDQPGASPVDMPSPSHDPQQPTNASSNLLDQDLAAMERQRAVAEAIEWGNNSRNKAPHRQTPPSL*


CDS Sequence:
>Vu_19457.1
ATGAGTTGCTTTTCATGTTTTTCATCAAGTAAAGCAGCCAAACCTTCTAACAATGGAAAGAGGATGCCACAGCCTACTTCTCATTCTCCCAACGAATCAGCTCAGTCACTACCAGAGAATCACAATTACAAGGCAAAGACAAACCATCAAACAGAACCTAAAATAGAGAAGGAGGTAAAAAAAGATAAAGAGAACAACAACATTGCTGCTCAAACTTTCACCTTCAGGGAATTGGCTAATATCACAAAGAACTTCAGGCAAGAATGCCTAATAGGAGAAGGTGGTTTTGGGAGGGTTTACAAAGGAAAACTTGAAAAAACCAACCAGGAAGTAGCTGTAAAGCAACTTGACAGGAATGGATTACAAGGGAACAGAGAATTTCTTGTTGAAGTTTTAATGTTGAGTCTTTTGCACCATAAAAATCTAGTGAATCTAATTGGATATTGTGCTGATGGAGATCAAAGATTATTGGTCTATGAGTACATGCCATTGGGATCCCTTGAAGACCATCTTCTTGATCTTGAACCACGACAAAAGCCTCTAGAATGGTTCCATAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCATGACAAAGCGAATCCTCCAGTGATCTACCGTGACTTGAAATCATCAAACATCTTATTGGACAGAGAATTCAATGCAAAACTGTCTGATTTTGGACTTGCAAAGTTGGGTCCTACGGGAGACAAATCTCATGTATCTTCAAGAGTAATGGGTACTTATGGATACTGTGCTCCTGAGTATCAAAGAACTGGTAAACTAACTGTACAATCAGATGTATACAGCTTTGGAGTTGTTATGCTTGAATTGATCACCGGAAGGAGAGCCATTGATAACACAAGAAAACCACATGAGCAAAATCTCGTTAATTGGGCAGAACCAATATTCAAGGAGCCAAACAGGTACTCAGAATTGGCAGACCCAGTTCTTGAAGGAAAGTTTCCGGTGAGATCCTTGAATCAAGCAGTGGCAATAGCAGCCATGTGTTTGAATGAGGAGCCATCAGTGAGACCTTTGATCAGTGATGTTGTGACTGCCCTTAGTTTTCTTGGGACAATCCCAAAGGGTGAAGAAGACCAACCAGGAGCATCTCCTGTTGACATGCCCTCCCCATCACACGACCCACAACAACCCACCAATGCTTCTTCCAATCTTCTTGATCAAGATCTCGCTGCCATGGAACGCCAAAGAGCAGTTGCCGAAGCCATCGAATGGGGCAACAATTCTAGGAACAAAGCACCGCACCGTCAAACTCCTCCTTCTTTGTAA


Promoter Sequence:
>Vu_19457::LG5:6846684-6848684(-)
ATACTTGTAGGCCTCGATTGAAGGTCGAGACTTGTCGGCCTCGGTTGAAGGTCGAGACTTGTCGGCCTCGGCTGAAGGTCAAGACTGACGAACTAGAGCCGATATGTTTAATAGTTCGTTATCCCATGCACAAAAGGGTGACAACATCAGACTCCCAGCCTTGTAGGGGTTTGATTAGTCATATTCATTCGTGATGTTTTCCTTCTAGTGTTTTCTTCTTCTTCAATTGACTCCTCCAATTGTCATTATTTTGATATGTCTCCTCAAGTTGTCTTTGAATCATAAAATTTTCATCTCTCTAAGTTGTTTCTCCTCCTCATTCTTCCTCTTAACCTTAACCAGTTGTTATTACAACTCCAAGAATAATGTAGTGTTTGAATCTATGTTGTTATATTTTCTAGTCACCACTTGTTTATCTTGATTGGTCATGTTTCTCGTAGATATCATTAGATCTTCTAAGTATACATCGACACCACGATAAGTGTCAAATGTTCTTGTATGGAACCAAATTGTTTTGTAGAATCATGTGTGCGTATATTCTAATGTCTAAGATGCTCTTGTGTGGCTCATGATTCAACTAATGGAGTCGGGGTAGCTATAGACACCATAATGTTCAAGTCATTGATATGATTTAGGTAACATGTATATAAACCTTTAGGAATACATTCTCGTTTTAGGAATGTTCAAATACTATAATAAATACCATATCTTAATTATTTGACATAGGATAGTATTATCCTATGTAGATCAAGATAATGCTAGCTAACTTGACCTCTTATTGTTTTTATAGTTGTAGGATAGAATAATTCCAATCTTATACAATACAAAAAAATAACCTGAATCTCATTTAAGTAAATTATATACAATATATTAACAAATTATAAATAGTTCTTAAATAATTAGCATTTCTCTCACTAATAACTTTATATTTTATCACTTAGTTTTTCTAAATTACTCAAATAACACGGATTGAGTATCATATGATATCTATACCTGCCTATCAAGAAGGAGATAATTAAAATATGCATGTATCACCCATTAACATTCATTATGGATTTACGCGTGTGATATAAGCTTGTAGTCTAATTGATACTTCAATTTGGTTTCTTAGATTTAGTATTTATGTGATTTTGATATATCTAAGTTATATATATATATATATATATATATATATATATATATATATATATATATATCCAAAACTCTAGTTAGAATTTCTAAGATTTTTGAAGTTGATATTGTCCTTTACTTAACGTTTTCCTTGAACTTTGTTAAGATCATTCAAGAAAAGATAATTTCATCTTTTCCCATAATACTATGTCAAAATATAGATCCAAAGGCCTCTATTTTTGTGTTTGTCTCATTCTATAATGGAACATAAGTGTGTTGTGTAACGACACATTGAACATAACTCCACACGTTGGAATTAGTTATGTTCGGCTTTCTCTCTCATACAAATCGAGAGAATGTTACAACTTATGTCCATTTTAGTCGCCACATTATGTGGGAAGATAAAAAAAAATTCATCATCCAAATTTGTTCCTATAGTGGCCAAAACTCTCCACGGTGTCTCTTTGTTTCTTGGTTTGTTAAGCCCCATTAGATGCATGGCATTTGGGTTTTGATGGGGTTTGGTTCTTCATTTGGGTTGTGTTTCATACTTTGTCCTTCCGTTCTCGAACCTCATTAGAAATCTTTTTCCTTCTTCTTTGTTTTCTTTCATTAAACATTCCAAATTAGAGTTTTTGGAGCTCCTCTTCTTCTGATTTCAAAGCTCTTAAGACAAAGATATTAAAGTCTCCTTAAAAGTTTAAAACCATTTTCACTTTGTAAAATATGTTTTTCTTTGCGGTTTTGGGGACGTAAATAGAAAAGGAAGCTTCTGTTGATGGATTGAAAATTTGGAGTCTCCAGGATTTTAAATTGAATCTATCTAAAGGTCCTTCTTTTTTTTTCTCCTTGAAAAAATCAATTTTTTTCTGTTTAGTATTTGTAGAGAA


Gene Sequence:
>Vu_19457(-)
ATGAGTTGCTTTTCATGTTTTTCATCAAGTAAAGCAGCCAAACCTTCTAACAATGGAAAGAGGATGCCACAGCCTACTTCTCATTCTCCCAACGAATCAGCTCAGTCACTACCAGGTGAAATCATTTGAACAAGAAATATCAATCATCAACTTTTATTATATACTTTTGTCATTAATATATATTTTGTATTCTTTTCATTAATATTTATTTTGTAATAAAAAATATAGAAATAAATATGTTTGTAGTCTTTAACCTTTGATGTAAAATTGATTTTTTTTATCTCAAATTTTAAGAGAGTCCAAAATTTAAAAACAAATATATATATATATATATATATATATATATATATATATATATATATATATATATAGATCTCATAACCGCTTGAATTCTTTTTGAGCAGTTATGATATATATAAGTTTGGAATATTATTTAATAAGTTTAAAAAAATTAATGTTATTAAATAAAAAGATTATATCTATTATTTTTTAAAATTAAGAATTAAAATGTATTAAAATTTGAGACAAAAATAAATTTTAATTTCGGGTATAAAAATTAAGAATATATTTAACTCAAAAGTTTGTCTCATGATTTTTAATGCAAACTTGTTTAGTTACAGAGAATCACAATTACAAGGCAAAGACAAACCATCAAACAGAACCTAAAATAGAGAAGGAGGTAAAAAAAGATAAAGAGAACAACAACATTGCTGCTCAAACTTTCACCTTCAGGGAATTGGCTAATATCACAAAGAACTTCAGGCAAGAATGCCTAATAGGAGAAGGTGGTTTTGGGAGGGTTTACAAAGGAAAACTTGAAAAAACCAACCAGGTAGGACAATGGCACTTTATTTTGCAGCTATATTACTCAGTACTCAGTTCTTTTTCTCTGGTGATATTGATGATCTTTTGAAGAACATGCCTCTGATATTTGTAATTAATTAAATATACACAGGAAGTAGCTGTAAAGCAACTTGACAGGAATGGATTACAAGGGAACAGAGAATTTCTTGTTGAAGTTTTAATGTTGAGTCTTTTGCACCATAAAAATCTAGTGAATCTAATTGGATATTGTGCTGATGGAGATCAAAGATTATTGGTCTATGAGTACATGCCATTGGGATCCCTTGAAGACCATCTTCTTGGTAAGATTCTGCTTATTCCTTCTGCTCATGTGAACAATTGATAAAGGTTCCCAACATATTTTGCTGAATTTTGTAGCAGATCTTGAACCACGACAAAAGCCTCTAGAATGGTTCCATAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCATGACAAAGCGAATCCTCCAGTGATCTACCGTGACTTGAAATCATCAAACATCTTATTGGACAGAGAATTCAATGCAAAACTGTCTGATTTTGGACTTGCAAAGTTGGGTCCTACGGGAGACAAATCTCATGTATCTTCAAGAGTAATGGGTACTTATGGATACTGTGCTCCTGAGTATCAAAGAACTGGTAAACTAACTGTACAATCAGATGTATACAGCTTTGGAGTTGTTATGCTTGAATTGATCACCGGAAGGAGAGCCATTGATAACACAAGAAAACCACATGAGCAAAATCTCGTTAATTGGGTCAGTTTTCCCTAATTCACTTTATATAAAAAAATGATTTTGATTTGTTAGATTTTGCCCTAATTGTTCCTGAACGAAGCAGGCAGAACCAATATTCAAGGAGCCAAACAGGTACTCAGAATTGGCAGACCCAGTTCTTGAAGGAAAGTTTCCGGTGAGATCCTTGAATCAAGCAGTGGCAATAGCAGCCATGTGTTTGAATGAGGAGCCATCAGTGAGACCTTTGATCAGTGATGTTGTGACTGCCCTTAGTTTTCTTGGGACAATCCCAAAGGGTGAAGAAGACCAACCAGGAGCATCTCCTGTTGACATGCCCTCCCCATCACACGACCCACAACAACCCACCAATGCTTCTTCCAATCTTCTTGATCAAGATCTCGCTGCCATGGAACGCCAAAGAGCAGTTGCCGAAGCCATCGAATGGGGCAACAATTCTAGGAACAAAGCACCGCACCGTCAAACTCCTCCTTCTTTGTAA