Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19408 LG5 5918843 5921970 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 5918934 missense_variant p.Thr31Ile
C/T 5919388 synonymous_variant p.Thr182Thr
G/A 5919625 synonymous_variant p.Thr261Thr
T/A 5919634 stop_gained p.Tyr264*
C/A 5919637 missense_variant p.Asp265Glu
T/A 5919910 missense_variant p.Phe356Leu
A/T 5919913 missense_variant p.Glu357Asp
A/T 5919983 missense_variant p.Ser381Cys
T/A 5920185 intron_variant
T/G 5920572 intron_variant
G/T 5920766 intron_variant
G/A 5920944 intron_variant
T/G 5921003 intron_variant
T/C 5921015 intron_variant
G/A 5921029 intron_variant
G/C 5921080 intron_variant
G/A 5921118 missense_variant p.Val454Ile
G/T 5921131 missense_variant p.Gly458Val
T/A 5921172 missense_variant p.Cys472Ser
G/A 5921173 missense_variant p.Cys472Tyr
T/A 5921378 intron_variant
A/G 5921399 intron_variant
A/T 5921576 splice_region_variant&intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19408.1
MDYTNCTYLFFVLIIACFLFSDVGTATDTITSSQFIKDNETITSTGGNYTLGFFTPQNSTKRYMGIWWQPKFTVIWVANRNQPLNDSSGVVTISKDGDLEVWNSQNHVIWSTNVYSVGSNTTSKLLDSGNLVLQESSSRRTIWESFQHPTNTLLPNMKISTNKVTGEKVKLTSWKSPSDPSTGSFSISVERLSIPEVFIWNETRPLWRTGPWNSKIFTGLPYMKTYYLEGGHVGDDGEGNVEFHYKGVEEIGFLIYILNSTGNYDERLWNGERKEWVVTWNSHQFECEVYGVCGPFAVCNSESSPTCSCLKGFEPRNREEWNRQNWTSGCFRRTPLHCERASNQIKSADHTDDGFFEMKMVKVPDFADSSSLRLQPDTCRSRCLENCSCIAYSYDADIGCMSWTENLIDITQFSNGGLDLHVRVAYTELEKERNSTIIIIVTVTVGTTLILIDPSKDKVLYWRKRFSIIEGVARGILYLHRDSRLKIIHRDLKASNILLDVELNPKISDFGMARIFGGNEDEANTKRIVGTYGYMSPEYAMQGSFSEKSDVFSFGVLLLEIVSGRRNSSFYDEENCLTLLGFAWIQWTADNIPSLIDPGIYDPSLYKYFYSEIADRPPPMKPAFILRENMLSSLPYVRGNDLNSLNTVTISDIQGR*


CDS Sequence:
>Vu_19408.1
ATGGATTACACCAACTGCACATACTTGTTCTTCGTTTTGATCATAGCATGTTTTCTTTTTTCAGATGTTGGTACTGCCACAGACACCATCACATCATCTCAGTTCATCAAGGACAATGAAACTATAACCTCCACTGGTGGCAACTACACCTTGGGGTTCTTCACCCCTCAAAATTCCACAAAACGTTATATGGGGATTTGGTGGCAACCCAAATTCACTGTCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAGTTGTTACCATATCTAAAGATGGCGATCTTGAGGTGTGGAATAGTCAGAATCATGTAATTTGGTCAACAAATGTGTACAGTGTTGGATCCAACACTACTTCTAAACTCTTGGATTCTGGGAACCTTGTCCTTCAGGAAAGCTCATCAAGAAGAACTATATGGGAGAGTTTCCAGCATCCTACAAATACTTTGTTACCCAATATGAAGATTTCAACAAACAAAGTAACTGGTGAGAAAGTAAAACTAACATCATGGAAAAGCCCTTCTGATCCATCCACCGGTAGCTTTTCTATAAGTGTTGAACGCCTTAGTATACCTGAAGTGTTCATCTGGAATGAAACTCGTCCATTATGGCGAACTGGTCCATGGAATAGTAAGATCTTTACAGGGCTGCCCTATATGAAAACGTATTATCTGGAAGGGGGACATGTTGGAGATGACGGGGAAGGAAATGTTGAATTCCATTACAAGGGAGTAGAAGAGATTGGCTTCCTAATCTATATTCTGAATTCAACGGGAAATTATGACGAGAGATTGTGGAATGGAGAGAGGAAAGAATGGGTTGTCACATGGAATAGCCATCAATTTGAGTGTGAAGTTTATGGTGTATGTGGACCTTTTGCAGTTTGTAATTCTGAAAGCTCACCAACATGCAGCTGTTTGAAAGGGTTTGAACCACGAAACAGAGAGGAATGGAATAGACAAAACTGGACTAGTGGATGTTTCAGGAGAACACCTCTGCACTGTGAAAGAGCCAGCAACCAAATCAAAAGTGCAGATCATACAGATGATGGATTTTTTGAAATGAAGATGGTCAAAGTTCCAGATTTTGCTGATAGCTCATCGCTCAGACTTCAACCAGACACGTGCAGAAGCCGATGTTTGGAAAATTGTTCATGCATTGCATACTCATATGATGCTGATATTGGTTGTATGTCTTGGACTGAGAATCTGATTGACATAACACAATTCTCAAACGGAGGACTTGATCTACATGTTCGAGTAGCCTACACAGAACTTGAGAAAGAGAGAAACAGCACAATCATCATTATTGTTACAGTGACAGTAGGAACTACCTTAATTCTCATTGATCCGTCAAAAGATAAGGTTCTTTATTGGAGAAAACGCTTTAGCATAATAGAAGGAGTTGCTCGAGGAATACTTTATCTTCATAGAGATTCCAGGCTAAAAATCATCCACAGGGACTTGAAGGCAAGTAATATCTTGCTAGATGTGGAACTAAATCCAAAAATATCTGACTTCGGTATGGCTAGAATCTTTGGTGGGAATGAGGATGAGGCAAATACTAAAAGAATTGTTGGAACATATGGCTATATGTCTCCTGAGTATGCAATGCAAGGATCGTTCTCTGAAAAATCAGATGTTTTTAGTTTTGGGGTTTTGCTACTTGAGATTGTTAGTGGAAGACGAAATTCAAGCTTTTATGATGAAGAAAACTGTCTTACCCTTTTAGGATTTGCCTGGATACAGTGGACAGCAGACAACATTCCCTCTCTAATAGATCCAGGAATATATGATCCTAGCCTTTATAAATATTTTTATAGTGAGATTGCGGATCGTCCTCCTCCAATGAAACCTGCATTCATCCTGAGAGAAAATATGTTAAGCTCACTTCCCTATGTAAGAGGAAATGACTTGAACTCCCTCAACACTGTCACTATTTCGGACATACAAGGCAGATAG


Promoter Sequence:
>Vu_19408::LG5:5916843-5918843(+)
TTCTCATATCTTCATTAAGAGCATCGTTCTTTGCCATCAGCAAAGAAACAATTTCATTTAGGGTTAAGTTTCGTAATTGAAAGACAAAATATTTTCCAAGACTCCAATAGAGTATTCAATAGCCATAGTCCTAAAACTTCATCATCAAAGTTTATACTCATTCTTGACAATTGATCTAAGAACCTTTGAAACTCATTTATATTATTGGAAATGAAATAATTCTCCATGTACCTCAAATTTATCAATAAATTCAATAAATACAATTCATTATTGCCCAAATTAAAAGCATACAAAGACTCAATTTTCTCTCATACATTTATAGCATGTTTCTCATTTCCAATGTGATTATAAACATTGTCACTACATATTGCAGTATAACACATGTTGGTGCTCAAAGTCCCATTCTTCATCATATATAAAATCCGACTTTTGTATAGCAAAGACTAGAAGATGAAATATCTTCACAAACAACAAGTCTTTCATCATGCCCTTTCACAAATGATAACTTTTACCATTTATAAAGTAACCATCTTTGTATTTGCCTCCATCATTCAAGGAATTAAACTCTAAACCAAGAGCTCTGATGCCATTCTAATGGAGAAAACAACAACATACCAAACAATGCAGTGAATATAATTTCTCCTAATTTCCAAGAATATATGAGGATCAATTTCTAGTGAACAGCAACAATAAATCACCAAAATCACAAACAAAAACACCAAGGTTATTAACATGGAAAACCCTTCAAAGTAAGAGTAAAGCCATAAGTCTTCCAGACTAAGGAAATAGTTCCACCATGATCAACATATAGTACAAAGGAGTGTTAGTCAATTGCATAAAATAATACTAACCCAACCAAACAACAAAGCAACAAAGCTTGCAAACAGAGAACAAAGAAGATAAAGAAAACTTAAATACACAGTTGTAGTGAAAACTAAATTTCTCCCAACTCAGATCTCCTATCAACAATCTGAACAGTCAGAATGAAGAACAGGATGTCTTGAACCTACTGTTAAATTTTTAACTTGATCCAACAATGAATGAATCTACAATATCGATTTTACAATCGTAGCTTTGTGAAAAAACGTTGATAGTTTTCTTTGTTCTTCTCTCTGAATATGGTAGTGTTCTCTAGCTGAGTATGACTCTATCTTTTTTATCTCTCATATTTTTTCAGTCATCTCTCCACTAGGTTAATTGATACATCAAGTGAGTTTCACGGGTCTTTTCTCCGTGTAGGAAGGGAGTCAATACAGAACAATTTTGTGTATATTTCTTTTAATTATATTAATGTAGATATGATTTAAATTTCAAAATGAACATAGTAAATAAAATGTCTTAAATTCATAAGAAAGATCTTCATTTAATATTAATATTTATGAAGTTTTACATTATATTCTGTCAAATATAATTGAAATGTATTTAAATTGACATATATGACATGAGACAGGAGAAAAAATGTATAATAAACTTTTTACTGTAGAATGTTTAAATCATATTCATTACAACCCTTGACATTACCATCAAATTTTTAACCATTTAAAAGAAAAGTCATTTCCTTAACCATTTAAACCTCTTATTATTATAGCCTTATTTTCTTTCCAACTGTCGCAATACTAGAATACTAAGAAATTGCAATGAAGACTTTCCCTTTGTTTTTAATGTCTGAATGACCGCAATCCAATCAACGTGGGACAATTTGTTTGAAGACCAATTAGAAAACTGAACCATGCTAGTGTCACAAACAACTTAAATAATTACGAAGTTCCATTTGACACCTTCCCAGAAATGAGGATAAAATATGATAACTTTAAATGATAATGTGTGAAAGAAATAAAAACACGTACAAGACTGTAGATTAAGCAGTGCTAAAAAGAGTAGCACAACACCAAACCGTGTTGATTTTTATGAGAAGTCACAGTCAAGAATGAAGTAGAAAAATGTTACTTGCAATTGCCTTAAAATTCATCTTATGGACAAGATATAATCACAATCTGTAA


Gene Sequence:
>Vu_19408(+)
ATGGATTACACCAACTGCACATACTTGTTCTTCGTTTTGATCATAGCATGTTTTCTTTTTTCAGATGTTGGTACTGCCACAGACACCATCACATCATCTCAGTTCATCAAGGACAATGAAACTATAACCTCCACTGGTGGCAACTACACCTTGGGGTTCTTCACCCCTCAAAATTCCACAAAACGTTATATGGGGATTTGGTGGCAACCCAAATTCACTGTCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAGTTGTTACCATATCTAAAGATGGCGATCTTGAGGTGTGGAATAGTCAGAATCATGTAATTTGGTCAACAAATGTGTACAGTGTTGGATCCAACACTACTTCTAAACTCTTGGATTCTGGGAACCTTGTCCTTCAGGAAAGCTCATCAAGAAGAACTATATGGGAGAGTTTCCAGCATCCTACAAATACTTTGTTACCCAATATGAAGATTTCAACAAACAAAGTAACTGGTGAGAAAGTAAAACTAACATCATGGAAAAGCCCTTCTGATCCATCCACCGGTAGCTTTTCTATAAGTGTTGAACGCCTTAGTATACCTGAAGTGTTCATCTGGAATGAAACTCGTCCATTATGGCGAACTGGTCCATGGAATAGTAAGATCTTTACAGGGCTGCCCTATATGAAAACGTATTATCTGGAAGGGGGACATGTTGGAGATGACGGGGAAGGAAATGTTGAATTCCATTACAAGGGAGTAGAAGAGATTGGCTTCCTAATCTATATTCTGAATTCAACGGGAAATTATGACGAGAGATTGTGGAATGGAGAGAGGAAAGAATGGGTTGTCACATGGAATAGCCATCAATTTGAGTGTGAAGTTTATGGTGTATGTGGACCTTTTGCAGTTTGTAATTCTGAAAGCTCACCAACATGCAGCTGTTTGAAAGGGTTTGAACCACGAAACAGAGAGGAATGGAATAGACAAAACTGGACTAGTGGATGTTTCAGGAGAACACCTCTGCACTGTGAAAGAGCCAGCAACCAAATCAAAAGTGCAGATCATACAGATGATGGATTTTTTGAAATGAAGATGGTCAAAGTTCCAGATTTTGCTGATAGCTCATCGCTCAGACTTCAACCAGACACGTGCAGAAGCCGATGTTTGGAAAATTGTTCATGCATTGCATACTCATATGATGCTGATATTGGTTGTATGTCTTGGACTGAGAATCTGATTGACATAACACAATTCTCAAACGGAGGACTTGATCTACATGTTCGAGTAGCCTACACAGAACTTGGTATACACTGTACAATGCTAGCTGTTATCTGCACAATAATCTTTATTAACTTTCTTCATCTGAGAACCTTTCTCCAGTGACAGGACTAAATTTCCTATTTTCATTTTTCGCAAATGCAGAGAAAGAGAGAAACAGCACAATCATCATTATTGTTACAGTGACAGTAGGAACTACCTTAATTCTCATTGGTACATATATCATGTGGAAAAGGATTTGTAGTGGCCACGGTAATTTGTCATCATTATCTGTTTAAATTACTCAAACTAGCTCATAATTTTGTTTTCTTTTTTGATTAACATTTTTATATCACTGCTAACTTATATTTGTTTATGTTGTTGCTAATTTGTGCCACTGTAATTGATCAGTAGAGATCATCAAAAGATTCCTTCAATTTAATGGAGATGGAGCACCTGCAGAATATATAAATGACAATGCATTTGGTGATCTGCCACAGGTCAAACTCCAGGAAACATTTAGTTTTGAAAACCTTGTAACCGCCACAAACAAATTTCACCCATCGAACAAACTAGGAGAGGGTGGTTTTGGTCCGGTATACAAGGTACTTAACATTTAGCTTCCTCATATATCAGAAAATATTGTCAATTGTTTCATTTTTCTCATTGTTATGTTATAGGGGCAATTGCAAGATGGCAGGGAAATTGCAGTTAAAAGACTTTCAAGAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTGGTAATTTCCAAGCTTCAACACCGTAATCTTGTAAGACTTTTTGGCTGCTGTATTGAAGGTGACGAAAAGATGTTGATCTATGAATACTTGCCAAATAAAAGCTTGGACAAATATATCTTTGGTTAGTTCTTTGATTTCCCTACCTTGCTTCCATCAACAATTGTTCTTTCTGGAGATTAAAGATAAACTGTGAAAAAATTAGATTGTGCTTCATCTCAAAATGTTGCAATTCATACAATTCTACCATTTGATTCTTTAGATCCGTCAAAAGATAAGGTTCTTTATTGGAGAAAACGCTTTAGCATAATAGAAGGAGTTGCTCGAGGAATACTTTATCTTCATAGAGATTCCAGGCTAAAAATCATCCACAGGGACTTGAAGGCAAGTAATATCTTGCTAGATGTGGAACTAAATCCAAAAATATCTGACTTCGGTATGGCTAGAATCTTTGGTGGGAATGAGGATGAGGCAAATACTAAAAGAATTGTTGGAACATAGTAAGCATACCTCTTTCTTCATGATTTTATTCGTATACTTGGAAATAAAGTGTGGTACATTTCAATGCAGTGGCTATATGTCTCCTGAGTATGCAATGCAAGGATCGTTCTCTGAAAAATCAGATGTTTTTAGTTTTGGGGTTTTGCTACTTGAGATTGTTAGTGGAAGACGAAATTCAAGCTTTTATGATGAAGAAAACTGTCTTACCCTTTTAGGATTTGTAAGTCAGAAAAATTCTTTCGAAGTTCACCAAAGGGGTTCGTATCCTTCTTCTGATAAAACTTTCAAATGTTTGAAATTTCTTTGCAGGCCTGGATACAGTGGACAGCAGACAACATTCCCTCTCTAATAGATCCAGGAATATATGATCCTAGCCTTTATAAATATTTTTATAGGTGCATACACATAGGACTTCTATGTGTCCAAGAATTTCCAGCAGATAGGCCTACTATGTCTACTGTAATTTCTATGTTAAACAGTGAGATTGCGGATCGTCCTCCTCCAATGAAACCTGCATTCATCCTGAGAGAAAATATGTTAAGCTCACTTCCCTATGTAAGAGGAAATGACTTGAACTCCCTCAACACTGTCACTATTTCGGACATACAAGGCAGATAG