Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19346 LG5 4632604 4637250 PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 4632703 intron_variant
T/C 4632709 intron_variant
G/A 4633059 intron_variant
T/C 4633291 synonymous_variant p.Thr754Thr
A/G 4633318 synonymous_variant p.Arg745Arg
T/C 4633563 missense_variant p.Thr700Ala
C/T 4633711 synonymous_variant p.Thr650Thr
G/T 4633712 missense_variant p.Thr650Lys
T/C 4633747 stop_lost p.Ter638Trpext*?
T/A 4633878 missense_variant p.Thr595Ser
A/G 4633889 missense_variant p.Leu591Ser
G/T 4633953 synonymous_variant p.Arg570Arg
G/C 4634157 missense_variant p.Gln502Glu
G/T 4634219 missense_variant p.Pro481His
T/A 4634370 intron_variant
A/T 4634371 intron_variant
C/T 4634549 intron_variant
G/T 4634550 intron_variant
A/T 4634682 intron_variant
A/G 4634715 intron_variant
C/G 4634716 intron_variant
C/G 4634756 intron_variant
A/T 4634769 intron_variant
C/G 4634799 intron_variant
G/T 4634805 intron_variant
T/C 4634849 intron_variant
A/G 4634993 stop_lost p.Ter441Argext*?
T/A 4634997 stop_lost p.Ter439Cysext*?
T/C 4635003 stop_retained_variant p.Ter437Ter
A/T 4635067 intron_variant
G/A 4635080 intron_variant
T/A 4635093 intron_variant
C/A 4635099 intron_variant
T/G 4635105 intron_variant
C/T 4635110 intron_variant
A/T 4635111 intron_variant
C/T 4635113 intron_variant
G/T 4635119 intron_variant
G/A 4635134 synonymous_variant p.Cys420Cys
C/T 4635135 missense_variant p.Cys420Tyr
T/C 4635368 intron_variant
C/G 4635408 intron_variant
C/T 4635411 intron_variant
T/A 4635475 stop_lost p.Ter359Leuext*?
T/C 4635494 missense_variant p.Arg353Gly
G/A 4635540 intron_variant
T/C 4635608 intron_variant
C/T 4635647 intron_variant
G/A 4635693 intron_variant
A/C 4635697 splice_region_variant&intron_variant
A/T 4635706 missense_variant&splice_region_variant p.Trp345Arg
A/T 4635738 missense_variant p.Leu334Gln
C/T 4635764 synonymous_variant p.Ser325Ser
A/T 4635776 synonymous_variant p.Ser321Ser
C/T 4635820 missense_variant p.Glu307Lys
A/T 4635875 intron_variant
A/C 4635940 intron_variant
C/A 4636074 intron_variant
T/G 4636161 missense_variant p.Ile260Leu
G/C 4636225 missense_variant p.His238Gln
C/G 4636296 splice_region_variant&intron_variant
C/G 4636385 splice_region_variant&intron_variant
G/T 4636619 intron_variant
G/A 4636748 missense_variant p.His136Tyr
G/A 4636883 intron_variant
A/G 4636926 missense_variant p.Tyr109His
A/C 4636930 missense_variant p.Ser107Arg
T/G 4636988 missense_variant p.His88Pro
T/G 4637000 missense_variant p.Gln84Pro
A/G 4637003 missense_variant p.Ile83Thr
G/A 4637006 missense_variant p.Ser82Phe
C/T 4637010 missense_variant p.Gly81Arg
A/C 4637012 missense_variant p.Val80Gly
C/A 4637094 missense_variant p.Asp53Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19346.1
MKMKMKKVSVTLLIFVLVEVIWCEGCWKEEREALWDLNARFGFPLSWQWDGTDCCEWEGVECNSSTGRVAKLDLQRLWSVGSIQSDWHLNYADLVVFKDLKSLNLSSSYGIFDCANSEGWENLEVLDLSESDIDNVTNILVCLNGLPSLKSLYLSYNRFHATFNVFETLSSQLLRLEILDISQNTLTNDMLPSLGGFTSMKELYLSDTGLDSDNHIQGLCSMLKNLEVLDLSGNNFDDTDIASALSELSSLKSLNLGNTQLTPRSILNISKIRSLEILDLEGNKLDESILRRLENNGFTWPSNLQVLKLSSNSFTNEFLSSLTGLRRLKFLDLNYNQLNGSLDISGLLALTSLEILDLSNNRISSFVVHQVSGSKSLSKLDVLTLDYNMINGSKLRESLQAFSSIRMLSMNSNEITGTITAGDFRDLGNLEQLTLDNNYDLDNEFFRSIGELTSLKVLSVFGCGINGTLPPAGEILLPLHPLTKMRRIDVSNNNITGQIPSNNISSILPNLQSLKLSTNLIQGSISPEFGKMRLLQTLDLSNNHLSGEIPKNLSGHGSLLKYLKLSQNKLDGPIFPTLKYLEELYLDDNSFYGSIPSSFLDSSLIHLDLSYNNLVGKLPSVVGNLSYLKTLSLSSNDLEGSIPTRLVELERLSYLDISDNNLTGSVPSFVNGSVNYIRLSHNRLSGLSKRMFSNRSFLMILDLSYNEITGSIQDMMQDLAHARLNILLLKGKMPFENDDSDSLRDVFNGFIRAKHAHSGSPTISPNDEDDDSPIDMHAFVMEEVFKF*


CDS Sequence:
>Vu_19346.1
ATGAAGATGAAAATGAAGAAGGTTAGTGTGACTTTATTGATTTTTGTTTTGGTGGAAGTGATATGGTGTGAAGGGTGTTGGAAGGAAGAGAGGGAAGCTCTTTGGGATCTAAATGCCCGTTTTGGCTTCCCTTTGTCTTGGCAGTGGGATGGCACAGATTGTTGTGAATGGGAAGGAGTGGAGTGCAACTCCTCCACAGGGAGAGTGGCCAAACTTGATCTTCAACGCCTGTGGAGTGTAGGGTCCATCCAATCAGATTGGCATTTAAATTACGCTGATCTTGTTGTCTTCAAAGATTTGAAGAGTCTCAACTTGAGCAGTAGTTATGGGATATTTGATTGTGCAAACAGTGAAGGGTGGGAAAATCTGGAAGTCCTTGACTTGAGTGAAAGTGATATAGATAATGTCACCAACATTCTTGTTTGTTTGAATGGCCTTCCATCTCTCAAGTCTCTGTATTTATCATACAACAGGTTCCATGCAACATTCAACGTTTTTGAAACTCTGTCATCGCAGTTGCTTAGATTAGAGATCCTTGACATAAGTCAGAACACTTTGACTAATGACATGTTGCCATCTCTCGGAGGATTCACATCTATGAAGGAACTGTATTTGTCTGACACTGGATTGGACTCAGATAATCATATCCAAGGTTTATGCTCTATGTTGAAGAATCTTGAGGTCCTTGACTTGTCTGGCAACAACTTCGATGACACTGATATTGCATCTGCTCTTAGTGAACTTTCATCTCTAAAGTCTTTAAATTTAGGAAACACTCAATTGACTCCAAGATCAATTCTTAATATATCAAAAATAAGGTCTCTGGAGATTCTTGACCTAGAAGGGAACAAGTTGGATGAGAGTATCTTGAGGCGTTTAGAGAATAATGGATTTACATGGCCATCCAATTTACAAGTCCTGAAGCTGAGTTCGAACAGTTTCACCAATGAATTTCTCTCATCTCTAACTGGGCTTCGACGTCTCAAATTCCTTGATTTAAACTACAATCAATTAAATGGATCGCTCGATATAAGTGGATTATTGGCTTTAACCAGTTTAGAGATTCTTGATCTAAGTAATAACCGAATTAGCAGTTTTGTTGTCCATCAAGTTTCAGGCTCAAAAAGTCTAAGCAAATTGGATGTCCTTACCTTAGATTACAATATGATAAATGGAAGCAAACTGAGGGAATCACTTCAAGCTTTCTCATCTATTAGGATGCTTTCTATGAACAGTAATGAGATTACAGGAACAATCACTGCAGGAGATTTTCGTGATTTAGGTAACCTTGAACAATTGACACTGGACAATAATTATGACCTTGACAATGAATTTTTCAGAAGTATTGGGGAATTGACTTCTCTAAAAGTTTTATCTGTTTTTGGATGTGGAATAAATGGCACCCTTCCTCCTGCTGGTGAAATCCTGTTACCATTGCATCCCCTTACTAAGATGAGGAGAATTGATGTGTCCAACAATAACATAACCGGCCAAATCCCCAGTAACAATATTAGTTCAATTTTACCAAATTTGCAATCTCTAAAATTGTCCACAAATCTCATCCAAGGTTCAATTTCTCCTGAGTTTGGGAAAATGAGATTATTGCAGACTTTGGATTTATCAAATAATCATTTATCAGGAGAGATTCCAAAGAACTTATCTGGGCATGGGTCATTGCTTAAATACTTGAAACTTTCACAGAATAAGCTCGATGGACCCATATTTCCAACTTTGAAATACTTGGAGGAGTTGTATTTAGATGACAATAGCTTTTATGGTAGCATACCAAGTAGCTTTCTTGACTCATCTCTCATTCACTTGGATCTAAGCTATAATAATTTAGTGGGGAAACTACCAAGTGTGGTTGGAAATTTGTCATACTTGAAAACACTTTCATTGTCCAGCAATGATCTTGAAGGGTCTATTCCGACAAGACTAGTTGAACTTGAACGTTTATCGTATCTAGATATCTCAGACAATAATTTGACGGGTTCTGTGCCATCTTTTGTCAATGGTTCGGTGAATTACATCCGTTTGAGCCACAACAGGTTAAGTGGTTTATCCAAAAGAATGTTCAGCAATAGATCTTTCTTAATGATACTAGACCTTAGCTACAATGAAATAACTGGCAGCATTCAAGATATGATGCAAGACCTTGCTCATGCAAGGTTGAACATACTCCTTTTGAAAGGTAAAATGCCTTTTGAGAATGATGACTCAGATTCATTAAGGGACGTATTCAATGGGTTTATTCGTGCAAAACATGCACATTCAGGGTCACCTACCATTTCTCCAAATGATGAAGACGATGACAGTCCTATTGACATGCATGCTTTTGTTATGGAGGAGGTTTTCAAATTCTAG


Promoter Sequence:
>Vu_19346::LG5:4637250-4639250(-)
TGGACATGTGAAACTTCAATTCTATACAAATAAGTAAGTTTTGTTGAAGAGATTTGTATGTTGATGATGTGAGATAGAGGGCTATAGTAAAGTTCAAAATGTGATTTTATTACTGCAAAAAATAATTGAGGAGGACTAGAGTGTAAGGTGAAGCTATTAGTATTGCCATTAATCAAATAAATGTAATACAATTAGGCAGTTTTTCGATCTCTATCAACTTCAGAGGGCATGTAAAAAAGTGTATGAGCTTTTGGAAAAGAGAAAGGGTTGTAAGGGTAGTAGTACTTGCAGGGTTATTGTCTAAGTCTGCCCATGACCACAACCATCATTTATGCCATGTCTTCATCATTAACGACCACTTTGCTCATATTGGCTTAAAACCATGGTCCTTCCAATCCAACTTCTTTTTTGGTTTTTCTTATACTATTAATTAGCACAATTACTTTAATCCTAAAATACTCTTTAATTTTTTTATAAGATAAGAAATCATTTATTGTGATGATCGTGAAAGTGATGAATTTAATCAAAAACAAAGATAATGTAAATCCATAAAATGAACTTTAGCTTAAATCACCTTCAAAATTTCAGCCAAGATTTAGTGTAGGAAAATGTGATTAGGTTGAGTCAATTACAACTTTCTATGGACTTACCAAAGACATTTAAAATATGACCTTTCTCGACCGAAAAAACTTCATTATGAGTATTCTTACAGATTCGAACTTTATCATCCGCATTGTGCCATAGACATTGGAAGTTCCACACTGATAAGCAAGCAATGGAACTTGTGGGAGGTTTCATAGTTAATCTTCCTTAACATGTTTTATTTTTTTAGTTAATGTCACATTCAAACTATTACACTATTCATGGTTTAAAACAACATACTTACAAGCTACAAAAGTGAGGAAACTTGACATGATTTTGGTTACTGTACAATTCTACAGGTGAAAGAAAAACAAGAGCCTATTTTATTAACAACATAATATATGAACATGCATCTAATATAACAAATATCTTATTAATCATAGGCACAAAATTTAACATTATTATCATCATCCCCTAATGAAGACAACCTTCCCTTGTAAACTTTTAAACGTACTGATTTTGTCAAAACTGGGCATATCCCGGATTGTAATTTTTTTGAAACACAAATTAACTTACAAAGCGATAAACAAATGTATCCACACTCAGATTCAACCAGAGAACAAATATAGACCCTTATCTGGCTCGAACCAAAATAATAACAACCCACATTGTATCCAAACTGCCTTAATAAAAACATTCGAACTTCACATGCAGAGAATAGACATAAAATTTCCAGAAACTAACTGTTATACAGTCCATCACCCCAACTGCTCAAAAGGGTAAAACTACAAAAGAAAAAATTAGAAAACCCTTACCTCAAAGTCACACACGAAATAAGCCACAAAAATGGAAACGCCAACCTAAAACCTCACAGCCATTGGAAACTTCCACAACCACCAATTGGGATCGGCACAATGATGCTACACCTTCAAACCCACGAAAAACCTCTACAACCACCGATTCAACCACTTCAAAAACACAAATGGGAAACAACGAAGAAGGAGGGAAAACGTGAGAGAAGCAGGTCAGAGAAAGTTAACCTAAATGGTTTTTTTCATTCACTGTCGAAAGAAGAACGAAAACTAAATTTACATTTCTCCCCTTTTACCCTCAAGTAGAATGCCATTTTTTAAAAAAAAAAATTACGTGTGCCGTGTCATATGAATGTAACTGACACGTAGGCGTGTCATTGTATTACTACTCTTCTAGAAAATGTCGTGTTCTTTTCTTTTTCAATTTCCAAAGTCATCAAATAAAGAATATATATAGATATATTAATATATACTGTTTAAAAGTGTTGATGATGGGAACAGGCATAGTAGGAAACCGCGGTCGTCACCAACTTTGACTCAGCCTTAAACTAGTTTACTTTAATTGGTTCATTCTTATTTAAATGGCCAAATCCTTTGCTACAAAAT


Gene Sequence:
>Vu_19346(-)
ATGAAGATGAAAATGAAGAAGGTTAGTGTGACTTTATTGATTTTTGTTTTGGTGGAAGTGATATGGTGTGAAGGGTGTTGGAAGGAAGAGAGGGAAGCTCTTTGGGATCTAAATGCCCGTTTTGGCTTCCCTTTGTCTTGGCAGTGGGATGGCACAGATTGTTGTGAATGGGAAGGAGTGGAGTGCAACTCCTCCACAGGGAGAGTGGCCAAACTTGATCTTCAACGCCTGTGGAGTGTAGGGTCCATCCAATCAGATTGGCATTTAAATTACGCTGATCTTGTTGTCTTCAAAGATTTGAAGAGTCTCAACTTGAGCAGTAGTTATGGGATATTTGATTGTGCAAACAGTGAAGGTTATTCTCTTACCCATTCCATTTCTTGATCATTGTTTACTCATTAAAAAGTGAAGTATGAATAATTATTTCCATTTAATTTGAATACTTTGTAGGGTGGGAAAATCTGGAAGTCCTTGACTTGAGTGAAAGTGATATAGATAATGTCACCAACATTCTTGTTTGTTTGAATGGCCTTCCATCTCTCAAGTCTCTGTATTTATCATACAACAGGTTCCATGCAACATTCAACGGTAAGGATATAGATTATGATGATGGCGACGGCGTGATAAGCATCTTTTTAATATTTACTTCAAAATTGGTTGGCTTCTTCTACAACCTTTGACTAATACATGTGTATACCTTTAGTTTTTGAAACTCTGTCATCGCAGTTGCTTAGATTAGAGATCCTTGACATAAGTCAGAACACTTTGACTAATGACATGTTGCCATCTCTCGGAGGATTCACATCTATGAAGGAACTGTATTTGTCTGACACTGGATTGGACTCAGATAATCATATCCAAGGTGGAATAATTTTCCCATTTCATTTGTAAAGCAAAGGATACTGATAATAGCTTCAGGATAATATATATACGTATGTAATGTAAGACACTTTAGCTTGCAGGTTTATGCTCTATGTTGAAGAATCTTGAGGTCCTTGACTTGTCTGGCAACAACTTCGATGACACTGATATTGCATCTGCTCTTAGTGAACTTTCATCTCTAAAGTCTTTAAATTTAGGAAACACTCAATTGACTCCAAGATCAATTCTTAGTATGTCACACTTCCTATATTTCAAATCTTCGTCGTTGCTTTTGGTTGAGAATATATGTGAGTGGGATCAGTTTATATGTTGCCAGATATATCAAAAATAAGGTCTCTGGAGATTCTTGACCTAGAAGGGAACAAGTTGGATGAGAGTATCTTGAGGCGTTTAGGTTAGTTGTCCTTATTCTTTACTTAATTAGAGTATATTTGACTCTGAAAATATTCATGCTCCTTCTTTAGTGTGTACACTCATTACCATATGCTGTCAATTCTGTTTTTATCAGAGAATAATGGATTTACATGGCCATCCAATTTACAAGTCCTGAAGCTGAGTTCGAACAGTTTCACCAATGAATTTCTCTCATCTCTAACTGGGCTTCGACGTCTCAAATTCCTTGATTTAAACTACAATCAATTAAATGGATCGCTCGATATAAGTGGTTAGTATAATCAATTTAATGTATTCGATTGGTTGATCACGTTGGCAGTGACTTCTCGTAATAATTATTTTATGGCGGTTGGACTTAGACTGTGAAACAGAGAATTATTTCTATGTTGTATTAGCAAAAGAGTAATACTCTTATTCTATGAATGATTATAACATCCATTCTCTGTTTGTCTCTAACAGGATTATTGGCTTTAACCAGTTTAGAGATTCTTGATCTAAGTAATAACCGAATTAGCAGTTTTGTTGTCCATCAAGGTATTTAAAGCAATTGATAAATAAAGTCTTGATGGGTTGTCTTCAGAATACAATTTTAATCCTGTTGTAAAGCATGTTATTTATTTCTTTACTGTGTTTAGTTGTTGTATTTGCTATTTCATGTTTTGCCAAATTAAACACCATTTTCATGTTTTAGTTTCAGGCTCAAAAAGTCTAAGCAAATTGGATGTCCTTACCTTAGATTACAATATGATAAATGGAAGCAAACTGAGGGAATCACTTCAAGCTTTCTCATCTATTAGGATGCTTTCTATGAACAGTAATGAGATTACAGGAACAATCACTGCAGGAGGTAGAAATACTTTTGGTTGTACTATAAACGAAATTAGTTTCATTGTTACACTAAATATAACTTCTTTTTCCATTGTGCAGATTTTCGTGATTTAGGTAACCTTGAACAATTGACACTGGACAATAATTATGACCTTGACAATGAATTTTTCAGAAGTATTGGGGAATTGACTTCTCTAAAAGTTTTATCTGTTTTTGGATGTGGAATAAATGGCACCCTTCCTCCTGCTGGTAATTAAATTTGTCATTATAGTTTTTGGATTTCCTCGTTAAGCATCACATATTTATCCTACACTTTTTTTCTCTGAAAATTTATATCATTTACACCGTGTTCTCATTAAGATGATATATATTTTCAAATTTTCATATTGCAGATTGGTTTAAATTGAAGAATCTCGAAGAGTTAGATCTAAGTCAAAATCTATTTGTGGGATCACTTCCTTCTTCTTTCTTAAACATGACATCTCTTCGAAAGTTGGAACTTTCACGAAATCAATTTAGTGGACAATTTGATTATAACATTGCAAGTCTAACATCACTTGAATATTTTGGTTTTATAGACAATCAATTTGAAGTTCCCGTTTCTTTTACACCATTTGCCAATCATTCAAACCTTAAGTTCATATATGGTGAAGGCAACAAAGTCATATTGGACTTACAACCTAGTATGCAAACTTGGATACCTAAATTTCAATTACAAGTGCTTAGTTTGCCTTCAATAACTGATATTGATTCTCTTCCGCTCCCCAGGTTTCTTCTATATCAAAACAATTTGACTAGCTTAGATTTCTCTAGTTGGAGGTTGGAAGGAAAGTTTCCTCACTGGTTGTTTAATAACAACACAAAATTGAATGAGCTTCTTGTTAGAAATTGCTCTTTCACAGGTGAAATCCTGTTACCATTGCATCCCCTTACTAAGATGAGGAGAATTGATGTGTCCAACAATAACATAACCGGCCAAATCCCCAGTAACAATATTAGTTCAATTTTACCAAATTTGCAATCTCTAAAATTGTCCACAAATCTCATCCAAGGTTCAATTTCTCCTGAGTTTGGGAAAATGAGATTATTGCAGACTTTGGATTTATCAAATAATCATTTATCAGGAGAGATTCCAAAGAACTTATCTGGGCATGGGTCATTGCTTAAATACTTGAAACTTTCACAGAATAAGCTCGATGGACCCATATTTCCAACTTTGAAATACTTGGAGGAGTTGTATTTAGATGACAATAGCTTTTATGGTAGCATACCAAGTAGCTTTCTTGACTCATCTCTCATTCACTTGGATCTAAGCTATAATAATTTAGTGGGGAAACTACCAAGTGTGGTTGGAAATTTGTCATACTTGAAAACACTTTCATTGTCCAGCAATGATCTTGAAGGGTCTATTCCGACAAGACTAGTTGAACTTGAACGTTTATCGTATCTAGATATCTCAGACAATAATTTGACGGGTTCTGTGCCATCTTTTGTCAATGGTTCGGTGAATTACATCCGTTTGAGCCACAACAGGTTAAGTGGTTTATCCAAAAGAATGTTCAGCAATAGATCTTTCTTAATGATACTAGACCTTAGCTACAATGAAATAACTGGCAGCATTCAAGATATGATGCAAGACCTTGCTCATGCAAGGTTGAACATACTCCTTTTGAAAGGTAACCGCTTTACAGGACGTTTACCGGAGCAGCTATGCCAATTGGAAGATTTAAATATACTAGACCTTTCTTATAACACTTTTTATGGTTCAATACCCAATTGCTTAGGTAAAATGCCTTTTGAGAATGATGACTCAGATTCATTAAGGGACGTATTCAATGGGTTTATTCGTGCAAAACATGCACATTCAGGGGTTTTGATACCAAATATAAACGTGAAAGCAAACTTCACTACAAAGAAAAGATCCTACACCTATACAGCGAGCATTCTTGCTTATATGTCCGGAATTGATTTATCCAAAAATAAACTAAATGGAAGTATTCCATATGAGCTTGGAAACTTGACTAGACTTCGGGCATTGAACTTGTCTCACAATGATTTGATTGGACAAATTCCAACTACATTCTCCAACTTAGAACACGTAGAGAGTTTGGATCTTTCTTTCAACATGTTAAGTGGTGAAATTCCTCCTCAACTAAATCAATTGAACTCACTTGCTGTATTTAGTGTTGCGCATAACAACTTATCAGGTGACACACCCGATCAAAAAGGCCAATTTATTACCTTTGATGAAAGCAGCTACGAAGGAAATTTTCTTCTTTGTGGACCTCCATTAACAAGAAGTTGCCATCCTTATGCACAGTCACCTACCATTTCTCCAAATGATGAAGACGATGACAGTCCTATTGACATGCATGCTTTTGTTGTAAGTTTTGGTGTGACATACACATCGATATTGCTAGTAATTGTTGCCACTCTCTACATTAATTCTTATTGGAGACGAGCATGGTTTTCCTCTATGGAATTGACCATCTTAAGTTGTTATTACTTTTTGCAAGATAGATGGAGGAGGTTTTCAAATTCTAG