Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19316 LG5 4174908 4177152 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein dimerization activity
SNP Position Effect Amino acid change
T/A 4174967 synonymous_variant p.Pro20Pro
C/A 4175153 synonymous_variant p.Ser82Ser
C/A 4175239 missense_variant p.Pro111His
T/C 4175240 synonymous_variant p.Pro111Pro
A/T 4175296 missense_variant p.Tyr130Phe
C/T 4175297 synonymous_variant p.Tyr130Tyr
A/C 4175346 missense_variant p.Thr147Pro
A/G 4175549 synonymous_variant p.Gly214Gly
A/G 4175583 missense_variant p.Lys226Glu
A/G 4175623 missense_variant p.Asn239Ser
A/T 4175852 intron_variant
T/C 4175869 intron_variant
T/C 4175903 synonymous_variant p.Ala300Ala
G/T 4175984 missense_variant p.Glu327Asp
A/G 4176098 synonymous_variant p.Gln365Gln
G/T 4176638 intron_variant
C/A 4176972 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19316.1
MENQFFLNAPQLHFDPSPPPCPPSWHSLSSPMDVQVLNCSAERTQDCFYTPAWDKSTDHAVQFDSALSSMVSSPAASNSNMSSENFVIRELIGKLGNIGGASDEISPHSQPLVPASSYINGNNSTNTSCYSTPLSSPPKLSLNKIPTMMNHLVKEGMPPSLNSSVAEFSTDPGFAERAAKFSCFGSRSFNGRTTQLGPSNAELTHRSSPLVENGKLPRVSSSPSLKVLGSQMSAQENKNSPLQDQMEVANSQEESTISEQIPNGDNGVKPSPYANSRKRKGPSKGKAKETSTPTNPPMAAEASEDSNAKRSKPNEGEGNENGQVKAEEESKGVTSNTNDDKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTKLDFSIESLISKDIFQSNNSLAQPIFPLDSSAPAFYGQHPQQNPAIHSNIPNGTVSHTSVDPLDTGLCQSIGMQLSHLNAFNEGASQYPIAFSEGDLHTIVQMGFGQTANRKTPVQSQSFNGN*


CDS Sequence:
>Vu_19316.1
ATGGAAAACCAGTTCTTCCTCAATGCTCCTCAGCTGCATTTTGACCCTTCACCACCTCCTTGTCCACCTTCTTGGCACTCACTCTCTTCTCCCATGGATGTTCAAGTTTTGAATTGCTCGGCTGAGAGGACACAGGATTGCTTTTACACTCCGGCATGGGACAAGTCAACGGATCATGCTGTTCAGTTTGATTCTGCACTCAGTTCAATGGTGTCTTCTCCTGCAGCTTCCAATTCCAACATGTCCAGTGAGAATTTTGTCATCAGGGAGTTGATTGGGAAATTGGGAAACATTGGTGGTGCCTCTGATGAGATCTCACCTCATTCTCAGCCTTTGGTTCCTGCATCTTCCTACATCAATGGCAATAACAGCACCAACACTTCATGTTACAGCACCCCTTTGAGTTCTCCTCCCAAGCTGAGCTTGAACAAGATCCCCACAATGATGAATCACTTGGTGAAAGAGGGCATGCCCCCCAGTTTGAATTCCAGTGTGGCAGAATTCTCAACTGATCCTGGTTTTGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGCAGGACCACCCAATTGGGCCCCAGCAATGCTGAGTTGACTCACAGATCTTCTCCATTGGTGGAAAATGGAAAGCTCCCCAGAGTCTCGAGTAGTCCATCTCTCAAAGTGCTTGGATCTCAAATGAGTGCCCAGGAGAACAAGAATTCTCCATTGCAAGACCAAATGGAAGTGGCCAATTCTCAAGAGGAATCAACAATCTCGGAACAAATTCCAAATGGGGACAATGGGGTGAAACCTTCCCCATATGCGAATTCTAGAAAAAGAAAAGGTCCATCCAAAGGAAAAGCCAAGGAAACTTCAACCCCCACCAACCCCCCTATGGCTGCTGAAGCCAGTGAAGATTCAAATGCAAAGCGCAGCAAGCCTAACGAAGGTGAGGGCAATGAAAATGGCCAAGTGAAGGCAGAGGAAGAGTCCAAAGGGGTAACTAGTAATACAAATGATGACAAACAGAACAAGAGTAACTCAAAACCTCCAGAGCCTCCAAAGGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCCACTGACAGTCACAGTCTTGCAGAAAGAGTCCGGAGGGAGAAAATCAGTGAAAGAATGAAGCTTCTCCAAGATCTTGTCCCAGGTTGCAATAAGGTGACAGGTAAAGCACTTATGCTTGATGAAATTATAAACTATGTCCAGTCATTGCAGCGCCAAGTTGAGTTTCTGTCGATGAAGTTGGCTTCTGTTAACACAAAGCTGGATTTTAGTATTGAGAGTCTAATCTCGAAAGATATATTTCAATCAAATAATTCTTTGGCACAGCCAATATTCCCACTAGATTCCTCAGCACCAGCCTTTTATGGGCAACACCCTCAACAAAACCCAGCAATCCACAGTAACATTCCTAATGGAACTGTGTCCCACACCTCAGTGGACCCATTGGATACTGGTTTGTGCCAAAGCATTGGCATGCAGTTATCTCACCTAAATGCCTTTAATGAAGGTGCCTCTCAGTATCCAATAGCATTCTCTGAAGGTGACCTCCACACCATTGTTCAGATGGGATTTGGCCAAACTGCAAATAGGAAAACACCAGTACAATCTCAGAGTTTCAATGGTAACTGA


Promoter Sequence:
>Vu_19316::LG5:4172908-4174908(+)
ACATGACGAAGAAGGAGTATTTTGAGTTAGCTCAACATATAGAATCATGCAAGAAAACCTAGGTGGGGAAAATAATACAACACTTATATCATATTGGAATGTAAAGGATTTTCATTGCCCAATACCTAGAGTGGAAAAGATACCAACAAAGGATAAGTTATTACATATGGGATACAATTTGGCAACAAATTTTGTGAGCTAGGTAAACACTTATTTTTCTATTGTAAAATAACTCAAAGGGTATAAGAAATGTGTGATAGTTGGGTGGGTGTATGTTCCGTGAACCACACAATCAACCTAAAACTCATTTCCAACACTTTCAGTTTTTGCAACTTCATGGGAAACAAAACAAAATTTGGAAGGCTATGTGGGTAGCAATAGTTTGAGCAATTTGGAACCATAGAAATAGATTTAGGTAAGGAAAGGTAGATATAGAAAAAAATATTTTGTATGGCACAGTAGAATGCATAACTATGTTACTTTCTCATTATGACTAGTATCAATGTCCTATCCAATGCTTAAATTTTATGTAAAAGGGATGAACATCTAATTAGTTCTTATTAGCAATGAAATCTAAGTTCTTAATCAAAGCATTCAGGATAATCATGCCACTTCATACGTTTTTGGACAATCTTTTCTTTACAATGACTGTTATAACTTAATCCTGTTTAAGAAAACAATGAACAGATTGCAAGAAGCTTGGGATTGAATTCAAATCTTATTCTCTAGAAAACGAGAGTATTGGCTGTGGGAAGAGATGGTGGTCTTGGGGAGCTGCAAGAACCATAACAGCAAAAGTCAAGGACTAATGCATAATACTAGTATTCCATTTCCATTGGGCTAGGAAGAAAATCAAAGCAAAAACACTAACAAAGCTACACCACAAGGAATGTTATGACAACGAGGTCATTGTATCAATGTTTTTTATTTGTTTGTAAATTACCCAATTTTTTTTAATAATGTTTGTTGAATTGGATTGATAAACATAATGTTGATAGGTTGAGTAATAGGCTTTGAAAAATCACTTGGTATGTGGGAGAGTTTTACAAGTTTTTAGATGTTTTATTTATAAACAATGTTGGTAAATCCTTTTTCAAAAAACCCATCATCCAACAATAAAAGATTAATGTTAATTACAAGATGAATTATTCTAAGAAGACTGCGAATTACACAGCCGTGTATGTTAATATGCATAGCCACCCATTTTGGCGTAATATGCTGTTTGTGGAATAAAAAAAAAGGGGGAGGAAAGAGCGGTAGTATTGGGAAAAAAGTTGTTAATACTGAAAATGGTGTGATTAAGTATTCAAACTAAGAAAAGACGACATAAATTTTACTTGAGCGAATAGATTAAAAGGTTGTTTTGAATGTTTTATTTGATATTCATATTTAGATGGTGGGAAAATAAGATTGGGAGAGTAAGTTTTGGTGGCATGCATTGCATTTGCATGGTGTTGTTGGAAGAGAGAATGCAGATTTCAAGAAAAGGGAAGGAGACATATTGTGGTGTTGTGACGTCGAAGGCCCGCCAAACACACTCCTCCGTCTTTTACGGAAGGGTAATATTCTCCAACTCCAGTTCAACACACAACACAGACAAAGCCAAGAAAAATTATGGCAAGAGAGAGATTAAAAAAAAAATCTATAAATAAAAAAAGTACCACATTACTGACTACCACTGCTACTCATCCAATGTTGCAAAGTATTATAAACAACTGAAAGAAAACAAAAGGTCAAACATACACAACTTGGACTCAACTTGTGTTGGATCTCTATTTAGGCCCCCCAACACCATCCCCATCAACCCCCTCCTTCTTTCCTTTGCTTTTTATTTACCTTTTCACACAACAATACCCCTCTCAAATTCATCACTCCATTCCACCCTCTAATGTAATCCATTCATCCATTCTTAAACCATTTTATTTTAGGCCTTTGGGACAAACACACACACACAACATTCATCATCCTTTTTTTGAGGTCTTATTTCATCTCTTCCTTCA


Gene Sequence:
>Vu_19316(+)
ATGGAAAACCAGTTCTTCCTCAATGCTCCTCAGCTGCATTTTGACCCTTCACCACCTCCTTGTCCACCTTCTTGGCACTCACTCTCTTCTCCCATGGATGTTCAAGTTTTGAATTGCTCGGCTGAGAGGACACAGGATTGCTTTTACACTCCGGCATGGGACAAGTCAACGGATCATGCTGTTCAGTTTGATTCTGCACTCAGTTCAATGGTGTCTTCTCCTGCAGCTTCCAATTCCAACATGTCCAGTGAGAATTTTGTCATCAGGGAGTTGATTGGGAAATTGGGAAACATTGGTGGTGCCTCTGATGAGATCTCACCTCATTCTCAGCCTTTGGTTCCTGCATCTTCCTACATCAATGGCAATAACAGCACCAACACTTCATGTTACAGCACCCCTTTGAGTTCTCCTCCCAAGCTGAGCTTGAACAAGATCCCCACAATGATGAATCACTTGGTGAAAGAGGGCATGCCCCCCAGTTTGAATTCCAGTGTGGCAGAATTCTCAACTGATCCTGGTTTTGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGCAGGACCACCCAATTGGGCCCCAGCAATGCTGAGTTGACTCACAGATCTTCTCCATTGGTGGAAAATGGAAAGCTCCCCAGAGTCTCGAGTAGTCCATCTCTCAAAGTGCTTGGATCTCAAATGAGTGCCCAGGAGAACAAGAATTCTCCATTGCAAGACCAAATGGAAGTGGCCAATTCTCAAGAGGAATCAACAATCTCGGAACAAATTCCAAATGGGGACAATGGGGTGAAACCTTCCCCATATGCGAATTCTAGAAAAAGAAAAGGTCCATCCAAAGGAAAAGCCAAGGAAACTTCAACCCCCACCAACCCCCCTATGGTAAGTACTTTTCATGCTAAAATTATTCTGTTTTACACTTTTTTTTATTCAAAGGGGCACTTCGTTTTCTTAACCTCAAAGGGTCTTTAACATCAGGCTGCTGAAGCCAGTGAAGATTCAAATGCAAAGCGCAGCAAGCCTAACGAAGGTGAGGGCAATGAAAATGGCCAAGTGAAGGCAGAGGAAGAGTCCAAAGGGGTAACTAGTAATACAAATGATGACAAACAGAACAAGAGTAACTCAAAACCTCCAGAGCCTCCAAAGGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCCACTGACAGTCACAGTCTTGCAGAAAGAGTAAGAATCAGCCATTTTCTCTCTCTGAATGACCCTGGCAGCAAGCATGTGTGGCCCTTTATTTTGACATTGTGTAAACTGATTTTGAAATAGGTCCGGAGGGAGAAAATCAGTGAAAGAATGAAGCTTCTCCAAGATCTTGTCCCAGGTTGCAATAAGGTGCATGTGCTGATAAGCTAAACCGAAATGCAAACAATTGGGTTGGTTTTGAATTCATTCCTTTACTAATTTAGTGATGAATGGTTGGTTGCAGGTGACAGGTAAAGCACTTATGCTTGATGAAATTATAAACTATGTCCAGTCATTGCAGCGCCAAGTTGAGGTAAACCAAACGAAACCAGTCTTAGCCAATAAGCATCTCAGATAATGGCCACAATAATGTTAAAGATTTCTTGCTGATTAAGAATGGCTTTTTGGTGTTGCAGTTTCTGTCGATGAAGTTGGCTTCTGTTAACACAAAGCTGGATTTTAGTATTGAGAGTCTAATCTCGAAAGATGTAAGTTTCAGGGCTCTAGACAATGGGTCTGCTTTTTTAACTAAAAAAATTATTGCTTTTTCCTGAATTGGGATTTGTTGGCTTTTTGGTGATTTCAGATATTTCAATCAAATAATTCTTTGGCACAGCCAATATTCCCACTAGATTCCTCAGCACCAGCCTTTTATGGGCAACACCCTCAACAAAACCCAGCAATCCACAGTAACATTCCTAATGGAACTGTGTCCCACACCTCAGTGGACCCATTGGATACTGGTTTGTGCCAAAGCATTGGCATGCAGTTATCTCACCTAAATGCCTTTAATGAAGGTGCCTCTCAGGTAATCAATTCCTTCTAGTTTCTCTTCAAAAAAGTGCCTTCTTTTTTTAAAGTCTCATTACACTTTTTCTAATTCTTCTTATCCAATGGTTTCCAGTATCCAATAGCATTCTCTGAAGGTGACCTCCACACCATTGTTCAGATGGGATTTGGCCAAACTGCAAATAGGAAAACACCAGTACAATCTCAGAGTTTCAATGGTAACTGA