Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19116 LG4 73660887 73661648 PREDICTED: transcription factor TCP7-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09159 Environmental adaptation   C 04712 Circadian rhythm - plant [PATH:ko04712]
SNP Position Effect Amino acid change
G/A 73660929 synonymous_variant p.Gly240Gly
G/A 73660959 synonymous_variant p.Gly230Gly
T/G 73661059 missense_variant p.His197Pro
G/T 73661060 missense_variant p.His197Asn
C/A 73661100 synonymous_variant p.Pro183Pro
C/G 73661160 synonymous_variant p.Pro163Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19116.1
MSNSDGPTNGVTTNDANAVVDSHQRSATTAAATTTTQGTALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSTVSDHKPLLPPPTPFILGKRIRPDDTDAVSKDEAVSLVAPPTPPALWALPPRPDFSQVWSFAAAAAAAAPPELVSVSSQNSLFHHHQHQHQHQHHHQQQQAAMGEASAARLGTYLPGHLNLLASLSGGHGNSGRRDEEPR*


CDS Sequence:
>Vu_19116.1
ATGTCCAACTCTGACGGACCCACCAACGGCGTCACCACTAACGACGCAAACGCAGTCGTCGACTCGCACCAGAGAAGCGCCACCACCGCCGCCGCCACCACCACCACACAGGGAACGGCGCTGGCCGTTAAGAAACCTCCGTCCAAGGACCGTCACAGCAAAGTCGACGGCCGTGGACGGCGCATTCGCATGCCGATCATATGCGCGGCTCGCGTGTTCCAGCTCACGCGTGAGTTAGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATCGCTGCCACCGGCACCGGCACCACACCGGCCACTTTCTCCACCGTCTCCGATCACAAGCCGCTCCTCCCTCCCCCCACGCCTTTCATCCTCGGCAAGCGCATTCGCCCCGACGACACTGACGCCGTGTCTAAGGACGAGGCCGTTTCGCTCGTCGCGCCGCCCACGCCGCCCGCGCTCTGGGCGCTCCCGCCGCGTCCTGACTTCAGCCAGGTCTGGAGCTTCGCGGCCGCGGCCGCAGCCGCGGCGCCGCCGGAACTCGTTTCGGTCTCGTCGCAGAACTCCTTGTTCCACCACCACCAACACCAGCACCAACACCAGCACCATCACCAGCAACAACAGGCAGCCATGGGAGAAGCCTCAGCAGCGAGGCTCGGAACTTACCTCCCCGGCCACCTCAATTTGCTGGCCTCGTTGTCTGGCGGTCATGGAAATTCCGGCCGGCGAGACGAGGAGCCTCGTTGA


Promoter Sequence:
>Vu_19116::LG4:73661648-73663648(-)
GAAAAACTTAAGGCTGAAGAAGAGAATACAGAAGAATTCAACCGCAGACATGACAACTTCAATTCAACAATATGATGAATAACACACGCCTTCATCTCAATCAACTCTTTCAAAGCAACCTATATATGCATTTCCTTCACCTCTATTCTCTCCACCTCTTACACAACAAAATATATACACAATACAACTCTTCCTTTTGTCTTCTCTTTAACTTGAAAACTTTTAATCATATATTCTGCTAAATAAGGTTCCCAGCGATGGATCGTTTCCTTCAAATGATTTCAGCTTTGGTTCTCATTCTAGTTTCTGTTCCATCGCTGGCTTCAGCGTCTCTCAAAGTAGGTTTCTACACCTCCACATGTTCATCTGCGGAGGAAATAGTGAGAAATGCCGTAAACAAAGGAATTTCTGAAAATCCTGGCATAGCTGCTGGTCTCATTAGGATGCATTTCCACGACTGCTTTGTTAGGGTAACTTCACTTCACTTAACTTAACTGTATTCAATAGTTTCAGTTTCTGGTTGCATATTAAAGACTGAATTTCACCATTACGTACTTTTTCTTCAGGGCTGTGAGGGTTCTGTGTTGCTAGCATCTACCCCGGGTAACCCAATAGCGGAAAGAGACCATCTTGCCAACAACCCAAGCTTACGTGGGTTCGAGGTGATCGAGGAGGCCAAGACACAGTTGGAGGCTGCATGTCCTGGAACGGTGTCGTGTGCAGACATATTGGCTTTCGCAGCACGAGACAGTGCTCTTAAAGTTGGCGGCATAAACTACGACGTTCCATCAGGACGCAGAGACGGTCGTGTCTCTATCGCCGACGAAGTGGCACAGAATCTACCTGCACCAACCTCGAGTGCCGCTGAACTCGTGAGTAGATTTGCACAGAAGGGTTTGAGTGCAGACGAAATGGTGACACTTTCAGGAGCTCATTCGATCGGTGTGTCGCACTGTTCCGCCTTCTCGAAGCGCTTGTACTCTTTCAATGACACGTTCACGCAAGATCCCTCCATGGACTCTTCCTACGCCGAAACGTTGAAGACCAAGTGCCCTGCGCCACCTGCCACCTCAGACCCAACACTCTCTCTTGACCCTTCCACTCCGGTTCGTTTGGACATCAAATACTACGAGGGATTGATCAACCACCGTGGCCTGTTGACGTCGGATCAGACGCTGTTCACCACCCAGTCCACAAGAGACACGGTCGTGAACAATGCAAACAACGGTGCAAGCTGGTCTGAGAAGTTTGCCAAGGCAATGGTGCAAATGGGTTCCATAGAAGTGCTCACTGGCTCCAGTGGCGAGATCAGGAAGCATTGCAGCTTTGTTAATTAACTAACTCACTCACACCTGCTACACTCAAGCAAAACTCGGTCAATCACTTCTCATTGAATTCTTTTTTTACATGTTTTTGGCGGAAAATAGGTTGTTTCTTGTTGATTGAATTTGGTATTGTAAATGGCTCTAAGAGGGTGCAATGAAGCTGTGTAAATCGATGCTTACATGATTTTGATTAAAGTTGAAGTGACTGCGTTGTAGAAAGTAAGCGAGGGGAGGGTAAAGTGAGAAAGAAGGGGGGTGAAGAAAGCAAAAAGATGTCCGGAATTGTGTGACATGAATTTTGAAGAGAATAATGAGGCGTTAGTTAGATGTTGGAAGAAGGAGAGGTGGCAAAAGAAGAGTGGATGATTAAACGTAGGTGCGTGGAGATAACAAAAGAAGAAACGGAGAGAAAGTTGAAGTGTATAACGAAGAAGTACGGAAAGTGAATGGGTCCCAGTGTGTTAGAGAGGAGAAAGAAGAGTTTGGGGTGTGGGGCCCAGTACCCATGTGCCTCTCTTCAGTCTCCACCACCTCCTGTTTCTGGCTCAATCATTACTCTCTCCTTCAATTCACTTCGCTTCAGTTCTCAACGTCAAACCCAAACCAAAACCCCTTATTCTTATTCTTCTTCTCTCGCGCCGCAACCAAACACGCCCTAATCCAATTCCGACCATC


Gene Sequence:
>Vu_19116(-)
ATGTCCAACTCTGACGGACCCACCAACGGCGTCACCACTAACGACGCAAACGCAGTCGTCGACTCGCACCAGAGAAGCGCCACCACCGCCGCCGCCACCACCACCACACAGGGAACGGCGCTGGCCGTTAAGAAACCTCCGTCCAAGGACCGTCACAGCAAAGTCGACGGCCGTGGACGGCGCATTCGCATGCCGATCATATGCGCGGCTCGCGTGTTCCAGCTCACGCGTGAGTTAGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATCGCTGCCACCGGCACCGGCACCACACCGGCCACTTTCTCCACCGTCTCCGATCACAAGCCGCTCCTCCCTCCCCCCACGCCTTTCATCCTCGGCAAGCGCATTCGCCCCGACGACACTGACGCCGTGTCTAAGGACGAGGCCGTTTCGCTCGTCGCGCCGCCCACGCCGCCCGCGCTCTGGGCGCTCCCGCCGCGTCCTGACTTCAGCCAGGTCTGGAGCTTCGCGGCCGCGGCCGCAGCCGCGGCGCCGCCGGAACTCGTTTCGGTCTCGTCGCAGAACTCCTTGTTCCACCACCACCAACACCAGCACCAACACCAGCACCATCACCAGCAACAACAGGCAGCCATGGGAGAAGCCTCAGCAGCGAGGCTCGGAACTTACCTCCCCGGCCACCTCAATTTGCTGGCCTCGTTGTCTGGCGGTCATGGAAATTCCGGCCGGCGAGACGAGGAGCCTCGTTGA