Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18895 LG4 68036496 68039181 PREDICTED: probable disease resistance protein At1g58390
Map

Annotations  
category   relationship type   keyword
Cellular Component   located in   chloroplast
Molecular Function   enables   ADP binding, ADP binding
SNP Position Effect Amino acid change
C/T 68036500 missense_variant p.Ala2Val
C/T 68036502 stop_gained p.Gln3*
A/G 68036518 missense_variant p.Lys8Arg
G/C 68036522 synonymous_variant p.Gly9Gly
C/*,T 68036531 synonymous_variant p.Ile12Ile
G/A 68036556 missense_variant p.Asp21Asn
A/T 68036557 missense_variant&splice_region_variant p.Asp21Val
A/G,* 68036600 upstream_gene_variant
A/G 68036608 upstream_gene_variant
T/G 68036619 upstream_gene_variant
G/A,* 68036628 upstream_gene_variant
G/A 68036650 missense_variant p.Arg25His
G/A 68036652 missense_variant p.Asp26Asn
G/C 68036657 missense_variant p.Leu27Phe
A/G 68036664 missense_variant p.Arg30Gly
G/A 68036674 missense_variant p.Arg33His
G/A 68036702 synonymous_variant p.Ser42Ser
G/A 68036718 missense_variant p.Gly48Ser
G/A 68036719 missense_variant p.Gly48Asp
A/G 68036725 missense_variant p.Asp50Gly
G/A 68036750 synonymous_variant p.Glu58Glu
G/A 68036755 missense_variant p.Arg60His
C/T 68036756 synonymous_variant p.Arg60Arg
G/A 68036758 missense_variant p.Cys61Tyr
G/A 68036767 stop_gained p.Trp64*
T/C 68036778 stop_lost p.Ter68Glnext*?
G/A 68036785 missense_variant p.Arg70Gln
G/A 68036789 synonymous_variant p.Ser71Ser
C/T 68036796 missense_variant p.Arg74Trp
G/A 68036804 synonymous_variant p.Gln76Gln
T/C 68036811 missense_variant p.Ser79Pro
G/A 68036813 synonymous_variant p.Ser79Ser
G/A 68036828 synonymous_variant p.Arg84Arg
C/T,A 68036829 missense_variant p.Arg85Trp
C/G,A 68036872 upstream_gene_variant
C/T 68036915 upstream_gene_variant
A/C 68036956 upstream_gene_variant
G/A 68036958 upstream_gene_variant
G/A 68036976 upstream_gene_variant
T/C 68036978 upstream_gene_variant
G/A 68037055 upstream_gene_variant
G/T 68037058 upstream_gene_variant
T/A 68037098 upstream_gene_variant
C/T 68037132 upstream_gene_variant
C/T 68037137 upstream_gene_variant
C/T 68037341 upstream_gene_variant
C/*,G 68037452 upstream_gene_variant
C/A 68037541 upstream_gene_variant
C/A 68037996 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18895.1
MAQKMGDKGGEIPYLYAFHFDEEKHAICSAGRSVSQTAFTQNRNLMVAATTSSSAHGGRNAVVAGGVSSNDRCVGDSFGRPGRHGGVGHAEVELWYPTGNDAPDLSVFDGEMEKIVTWLESNNGFKAIGVHGMCGTGKTTLAKMVLSDPRVKDKYKKPIWVCLYDLQSKEEMDIRIVKEMLALLDDDPDLLAEEPEDKWLVKNLHDKLLDQKNKELFSQALPKETGGAVIVTSRQKEVTTKLVREENLIHLKPWGDEKLKNFVKKCLEKQDKITEENINCVAYHCHGIPYVAATMSGWIAKQITKKSDSN*


CDS Sequence:
>Vu_18895.1
ATGGCGCAGAAAATGGGGGACAAAGGGGGCGAAATCCCTTACCTTTACGCCTTTCACTTCGACGAGGAGAAACACGCGATTTGCTCCGCAGGACGCAGCGTTTCGCAGACGGCGTTTACTCAGAATCGGAACCTAATGGTAGCGGCAACGACGTCATCAAGTGCGCACGGAGGGAGGAACGCTGTAGTGGCTGGCGGTGTCTCTAGCAACGATCGGTGCGTCGGCGACAGTTTTGGTCGTCCAGGAAGGCACGGCGGCGTTGGTCATGCGGAGGTAGAGTTGTGGTACCCCACAGGAAATGATGCACCAGACCTTTCAGTATTCGATGGAGAAATGGAAAAGATTGTGACATGGCTTGAATCCAATAATGGGTTCAAGGCCATTGGTGTTCATGGAATGTGTGGCACGGGAAAGACCACTCTTGCCAAAATGGTTCTGAGTGATCCACGAGTCAAAGACAAGTACAAGAAGCCCATATGGGTGTGTTTGTACGACTTGCAATCAAAAGAAGAAATGGATATTAGGATTGTTAAGGAGATGTTGGCACTTTTGGATGATGATCCTGATCTATTGGCGGAGGAACCTGAAGATAAGTGGCTGGTGAAAAATCTTCATGATAAACTCTTGGATCAGAAGAACAAAGAACTCTTTTCCCAAGCCTTGCCCAAAGAAACTGGTGGTGCTGTCATTGTCACCAGCAGACAAAAGGAAGTGACTACTAAATTGGTGCGTGAAGAGAATTTGATTCATCTTAAGCCTTGGGGTGATGAAAAATTGAAGAACTTTGTGAAGAAGTGTTTGGAAAAACAAGATAAAATCACTGAGGAAAACATTAACTGTGTTGCTTATCATTGTCATGGTATTCCTTATGTTGCTGCAACCATGTCAGGTTGGATAGCTAAGCAGATCACCAAAAAGTCAGATTCTAATTGA


Promoter Sequence:
>Vu_18895::LG4:68034496-68036496(+)
AGAGGCAAAATAGGCAACGCATGCCATAGATGCAATGAAAATTGGTGATATCATTATTCATGGATGGTAGTCAATTGCATTGGCCACTTTGTTTATTCACATTCCAAACAACAACACATCTGACAATGACAATAACAAAGACATTAAAACTTCAATTAACATTAATAATAACCAACTGAAGTAAAGTTTCATCTTTTATTTCATTAAAAAAATTCGGTACAATAAACTTATTTGTTCATCTGTGAACAATTTTGTATTCCTTTATATAACAATTCAATACAAAAATCACTCGTGTTTCGCTATATTTCCTGTGTATGGGGTTCTAAGCGCCTTGTTCTTGTAACACTTTCGCGATCCGACCCTCATAAACCTCTGCACACTGGGTTGGTTGTTGTACATGCCTCCCGAGCTAACAAAGGTCGTGTTCATGTCGGATTCTGCACGAGACGTACTTTGTACATTTCTCATTTTATTCTTCTCTTCAAAGCACAAACATACTTTGTGAAAAAGAATGACGAACACACAACTGCATCAAAGAGACCAAAATAAGAAAGGGCCAACTCCCTTAAACGAAAAAAAAAAATTAAACACAACAACGAAAACCCAATGCCAAACCCAAAACGCAATGAAGAAAATGGATAAACCCATTTACCTTGCTCGAACCACCATGGTCAACAGAGAATACCATTATGCACAATGAGGAATATGAGAGCGAACGAAATGGAGGACTAAAATGAGAAGAAAGAACTTTGGGTTCGTCCCACGCAAATGAGGAGCCAAAGGAAATGAGGAGCCACGAGAGAACGATGAACATGAGGCAAAGTTGGAGAATGCCAAGGGTTTTGCTTAATGCTAAGAAAGAGGAGAATGAGAAAATAGAAAGAGAATGGTGAACCAAAACGCAGAAACACAATCTGGAGAGATAAAGAAATAAAGGTATTTTTTGGAAGCATGAGAAAAAGTTAACCCTTAACCCATTTTGACGTCAGATTTTTATTAAAAAAATAATTGAAACTGGTCAATCAAATGCTGACACGTGACGTTGTCGAAAGTGTGTTAAAAATTGGTTGTCAAAATATCGAGACCCTATATTATATAAGGTATATAAAGGAGAAGTAAGGTAACTTAGAATTTTTAAGACGAGTAGGTCTACTCTTAGTAATTTATATCTTGGAGTACTATTTTGTGATTGAACAATATTTTTTCTTATATTTATGTAAAAGGATTGACTCAAATATTTCTATTAATATATTTCTTATCACTGATAAAAGAATACATCAAGTGACTCTCATATTTAAAATAAGGTTTAATAGCCAATTTTGTCCCCAGTTTCGTTGCCAAATCTCAATTTAGTCCTCATTTTAAAAGTGTTTGAAATAGATCCCCACTTTTAAAATTTTGAGTCAAATTAGTCCCTTCCGTTAAATATAAACAAACGGTGTTAAGGGTTTGATGATTTGGCAGAAAACAATGCTAACATGTTATTTTATAAATATATTTATGCTGACGTGTGTTAGTGAATGAAAGAGTAAAGACCCCTCATCATCATCTTAATATTGTCTTTTTTGTTCCGTTTTATTTATCCAGTCGTTTTTTTATGTTGCTAAAGCAATTTTCCATCTCCATGTTTTCGAATTCGCAAACATTTTTTTAATCAAGTGTTTCCAGTGGTGTCATTCAAGGTATTGATTAATAAAACCCCTAAATTCAAAATTTCATTTCAGTTCCATTGGACAGATGAAAAATTGGTTTGATTACAGGAGCGTAGAGGGAGCTGAAGAGATGACAATAAAATCTGTTGTTGCGTTTCGGAGGGGAAGCTGGTGGTGAAGGACGAACGATTCTGACAGGAATACAGGAGAACGTGGTGGAGACATCCACGGTAGAAGGAATGTTTCTAGGGAGTGGATATAGAGAAGGAAGATAGCAGACACGTAGTTTCGTTAGGAACTTGAGGGATGTGAGGTTCATGGCGTGCTTCCGGTTCAAGCTGTGGTGGA


Gene Sequence:
>Vu_18895(+)
ATGGCGCAGAAAATGGGGGACAAAGGGGGCGAAATCCCTTACCTTTACGCCTTTCACTTCGACGGTGATGCTATCAGAGGCTGAAGTGAAGCGGAGGAATTAGGAGCTCAGGACGAGTTGCGATTTGTGTTTGCGATTCGAAGAGGAGAAACACGCGATTTGCTCCGCAGGACGCAGCGTTTCGCAGACGGCGTTTACTCAGAATCGGAACCTAATGGTAGCGGCAACGACGTCATCAAGTGCGCACGGAGGGAGGAACGCTGTAGTGGCTGGCGGTGTCTCTAGCAACGATCGGTGCGTCGGCGACAGTTTTGGTCGTCCAGGAAGGCACGGCGGCGTTGGTCATGCGGAGGTAGAGTTGTGGTGGAGAAGAGACCTTCGTTTCTGAAAAAGAAAAAAAGAAACCTAGAAGGCTTGGGCCTCGCCTAGAAAATATCAAGTGCACCTCTAAATTTCATCTATGCACCCATTCACTAACACGTTAGCATAAATATATCTATAAAATAACATGTCTTTTGCCAAATCATCAAACTCTTAAGCCGTTTGTTTCTATTTAACGGAAGGACTAATTTGACTCAAAATTTTAAAAGTGAGGATCCATTTCAAACACTTTTAAAACGAGATTTGATTTGTCAACGAAACTAGGACAAAATTGCTATTAAACCTTAAAATAAACATTTTAAAATTTCTAAAAACATTTTATTGCAACTTCAACCACCATGAAATCCCCGTTTCCTTCTTTTGCATGGTTTCCATTGCGATGGCTCCCAATTATAAAATTTTGTTACACAGAATCAATATCTAAATCTAGACCATAAAGAAAAAGATTTAAGTCTTTAATAATACGATAATTTAAAACTAAAAATTTAGTTTTTAATTTTATTATTATTTGAATTGACTAAAATTAGTCACTAAAATAGATTAAAATGACTAAAAATTAATTTCCATTTATATCACAATGAGGGATTAAAAAATTATTTCTAAATAAAAAAATACTTTTTAATGATCACTAATTATTAAAAATAAATTTCTAATATATTATAAACTTTTATTAATAATAAAAATCATTTTAGATATAGTAATTTTTAGTTTATAAAATAATTTTAATTCAATTACTATAATATTAATCTCTAAAGTAATATATATTTAATTAATTTCTTATATGTTACTAACAGTTTGCTAAAATAATATTACACGGTAAATTAATTTATCTAAAGTAATATGTGTTTAACAATATTACAATATTGCTATAGTAACATTTTTATTAAATATATTATGAAAATGCTCCTAAAACTAATAAATCCTGTAGTCAGAATCTCTATTGCATGTTTCAGTTTGGTTTGGTTTTCAACCGTGGAAATGGAATCATTCATTTCCCTCGAAGAGAAAAGATGAAATATCTGTTACATCGTTCCAAGAAAAGAATATAATTCCAAGCTTATAGTTTTGGTGATAGATATGAGACAAACAAACAATACTATTGCCTTCTTCATTTCAACACCACAAGTTGGAAAACAAAAGTGAAAAAAAAACATTCATCATTTTCTTACTCTCAATCATCATTACCATCCTAGCTCCCTCCTTCAATCATGGCCTCAGACACTGCTGAAATCCTTAAAGAAAACTTCTTGGAATTTTTCAAAGATAGTGATTTAACCTATCACCTACATCTATCTCTTCCTATTGAAAGAAATAGAAGCAGAATTCTCAGAGTACAAAGGATTCTGGTCACCTCCACCTGTTGAGTCCCTAAGTATTTTGTACCAACTGGATCATGCAATTGCCGAGTGTCGTGCAAACAAGAAAACCTTCTCCATGTTCTCACGTTTTGATCCAGTGGAACGTGCCAACGAGAACGTGTTGAAAAGTATCAAGAAGAATCTCCATGAAGGGAGGCACTCCAAAAATATATTAATGAATACTCAACCTTCCCCTTGTTCTCTTCATGCAGGTACCCCACAGGAAATGATGCACCAGACCTTTCAGTATTCGATGGAGAAATGGAAAAGATTGTGACATGGCTTGAATCCAATAATGGGTTCAAGGCCATTGGTGTTCATGGAATGTGTGGCACGGGAAAGACCACTCTTGCCAAAATGGTTCTGAGTGATCCACGAGTCAAAGACAAGTACAAGAAGCCCATATGGGTGTGTTTGTACGACTTGCAATCAAAAGAAGAAATGGATATTAGGATTGTTAAGGAGATGTTGGCACTTTTGGATGATGATCCTGATCTATTGGCGGAGGAACCTGAAGATAAGTGGCTGGTGAAAAATCTTCATGATAAACTCTTGGATCAGAAGAAGTACTTGATTGTGTTGATGCTGTGTGGCATTGCAACGATTGGTTTAATAATTTGTTCTGTGTTGATCAAGATGGTGGTGATACGAGCAAAGAACTCTTTTCCCAAGCCTTGCCCAAAGAAACTGGTGGTGCTGTCATTGTCACCAGCAGACAAAAGGAAGTGACTACTAAATTGGTGCGTGAAGAGAATTTGATTCATCTTAAGCCTTGGGGTGATGAAAAATTGAAGAACTTTGTGAAGAAGTGTTTGGAAAAACAAGATAAAATCACTGAGGAAAACATTAACTGTGTTGCTTATCATTGTCATGGTATTCCTTATGTTGCTGCAACCATGTCAGGTTGGATAGCTAAGCAGATCACCAAAAAGTCAGATTCTAATTGA