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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18827 LG4 65970802 65971374 hypothetical protein LR48
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Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to stress, regulation of transcription, DNA-templated, heat acclimation, positive regulation of transcription, DNA-templated, heat acclimation
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_18827.1
MLAKAHSKGDGTKSLAKILAKWKEYNAQLDSCDDADKPVRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFPNVSVSSFSEESSKDSPLANHSGSSKAVSANESMVSLSNSKGGGAEEDVDMEPISLSLSVKHENGEGESG*


CDS Sequence:
>Vu_18827.1
ATGTTAGCGAAAGCACATAGTAAGGGGGATGGAACCAAGTCCCTGGCTAAGATACTGGCGAAATGGAAAGAATATAATGCCCAGCTTGATTCCTGTGATGATGCGGATAAACCAGTTCGCAAAGTTCCTGCCAAGGGATCAAAAAAAGGGTGTATGAAAGGTAAAGGTGGGCCTGAGAACTCGCGGTGTAATTACAGAGGTGTTAGGCAGAGGACTTGGGGAAAGTGGGTTGCTGAAATCAGAGAGCCGAACAGAGGGAATAGGCTCTGGCTAGGTACTTTTCCCACTGCCATTGGAGCTGCCCTTGCATATGATGAAGCAGCGAGGGCAATGTATGGATCCTGTGCCCGTCTTAACTTTCCCAATGTTTCTGTTTCCAGTTTCTCTGAGGAATCCTCCAAAGATTCTCCATTGGCGAATCATTCTGGTTCCTCAAAGGCAGTGTCTGCAAATGAATCCATGGTTTCACTTAGTAACTCTAAGGGGGGAGGAGCAGAAGAGGATGTCGATATGGAGCCCATTTCCTTATCCTTAAGTGTAAAACACGAGAACGGTGAAGGTGAATCGGGATAA


Promoter Sequence:
>Vu_18827::LG4:65971374-65973374(-)
ATACGTTGTTTTTGTACTAGTGGACTTTTAAATTCGACGTCAAAAGGTTAGTGCATTCAATAAAAATTTGAGCGGAAGATTGAAAATTCATTCACTTTATCTTAGTGCGCGATACTCTCTTCTCTTCTCAAACTTTTCTCAAACGAAGTTTGACGAGCATCACATGTAATCTTTCTTTCATTTGATATTAATTACTTTATGTATGATTTTTGTTTGTTTTAACCGATTATTTTCGTGCTTTTGTCCTTCATAGGCGCATTCTGTTTTCTCTCACACTGTGACAAAACTTTATTCCGACGAATCCACTTTTTGAAGGTTAGTTTTCGTTTTGGAGAACTTATTTGTAGAACTTGTTTGTTGTTTTTTTGTTAAACTTGTTTATTGTTGTTGTTTAGTTGAACTTGTTTGTTGTTGGTTATTATTGTTTGTTGTGATACTATACTATACGTTCATAGTTCATGCTTTATAAAATACCAAACATTGTGTGTTGTTTTTTTTCTTTTCAGGTCTTGTAAAGTTGTAAAAATGGATCACAATTAATTAAAAAAAATAAAAAAATTTGATTAACGTCAAATATTAACAAAATTCGACGCGTCAAACTTTTTAAATTCGACATAAATTTAACGTCTTTTAATATGACGTCGTTCGCGAATTCTCCTATGACGTCGTGCGAATTCGTCGTTTAAACGAGAGATTGGTAGTATTGTTGAGAAATTTAACATGAGAACAAAAAATCATAATAAATTTTTTCAACCGAATTTAAAATATAAAATAAAAAGTATAATACAATTTATGTACAATAAAATATAAGAGTCTGAAATATGTTAAACCCACATGTACAAAAATAAAATTAGTTTGATTTATATTAAGTTTAACTTAATCATTAATAAAAGCTAACCTAATTTAATTAGGTTAAATTTGGTGGGAGTGGATGAGGAATTCATTGAAGGTCGTAGTGTTTGACTAAAATGTAAATATGGCAGAAATTAAAAACAATTAGAATGTTAAAATGAAAGATAAGCAAAAGACAACAGTAACACTGCAATTAAAGAGTGATGGAAGTAATATTAATTTTCTTTATTGCCACATTTATTATTGATTACCTTCTTTGTTTGTTAGCATATTCTTGAAAATGATGACCAAAGCGAAGCGGCTGGTGAACCCTAATTAGTTGTCGGTGTTTGTTGGCAGAGCTCGTCTCTGTTTTCTTCGTCATCTCCCATCCTCGGCCAGAGATGCGCCGAACACACTAAAGCTTTCGACTTTCCGACACCCTCTCAGGTTTTACCTCTTTCATCTTTTTTTTTTCTTGTTTTTTCCTTCTCAAAGGGCTTTTATTTTCTCTGGTATTTTTTTTTAGTCTGCCCCTAAGTTTTTCTTATTCCCAATTGTACTGATGAACCGAGGAAGGGGACTGATCACTTGCTGACATTTGCATTAGATATTGTTTGGATAATTTTCGTAGTAATTGTATTGGTGATTGTAGAGTTGGGTTAGCACAAATATGTGTAGAGTGGTGTGATGTTTGCTATGTTATTGAAGGGACAGTGGAATGATAAGCATGTTAAATGGGGTTATTTGTTTCAGTTTCTCATCGGAGATATGTTACAATTTGAGTTACAGCGAGTGAGCACTTGAATTTTTATTACTTGTGTGTTTGGGTTCACATTAAGTTATCTAGAAGCACGTTGAAGTATCAGTTAAATGCCTTGATGTTTGATTGCACACTGAATATTTGATCTTGAGTTCAAGCAACTTTATGGAGCTTTGATAAAAATAATTTATACAAAGTTTTACCATTGCTTTAAGAATAAAAACATCCACATTTGAATCACATCCTCTTTTCTTTCAAAACCAGTTTTGCAAAATAATTACTCAAGCACACATAAGCTTGAAGACTTGTTTTCTTGACAGGTGTTTGATTAAGTGTTGCTATGTTATAATGTTAACATTGTAGGTTTTTCCTGTTCATTACATAGTGCAACTTGAATTGGATGCAC


Gene Sequence:
>Vu_18827(-)
ATGTTAGCGAAAGCACATAGTAAGGGGGATGGAACCAAGTCCCTGGCTAAGATACTGGCGAAATGGAAAGAATATAATGCCCAGCTTGATTCCTGTGATGATGCGGATAAACCAGTTCGCAAAGTTCCTGCCAAGGGATCAAAAAAAGGGTGTATGAAAGGTAAAGGTGGGCCTGAGAACTCGCGGTGTAATTACAGAGGTGTTAGGCAGAGGACTTGGGGAAAGTGGGTTGCTGAAATCAGAGAGCCGAACAGAGGGAATAGGCTCTGGCTAGGTACTTTTCCCACTGCCATTGGAGCTGCCCTTGCATATGATGAAGCAGCGAGGGCAATGTATGGATCCTGTGCCCGTCTTAACTTTCCCAATGTTTCTGTTTCCAGTTTCTCTGAGGAATCCTCCAAAGATTCTCCATTGGCGAATCATTCTGGTTCCTCAAAGGCAGTGTCTGCAAATGAATCCATGGTTTCACTTAGTAACTCTAAGGGGGGAGGAGCAGAAGAGGATGTCGATATGGAGCCCATTTCCTTATCCTTAAGTGTAAAACACGAGAACGGTGAAGGTGAATCGGGATAA

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This project is funded by the Department of Biotechnology
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