Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18555 LG4 59757384 59759745 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 59757411 missense_variant p.Ser427Asn
G/A 59757430 missense_variant p.Leu421Phe
G/A 59757442 stop_gained p.Gln417*
G/A 59757443 synonymous_variant p.Leu416Leu
G/T 59757445 missense_variant p.Leu416Ile
T/A 59757466 missense_variant p.Arg409Trp
A/C 59757550 missense_variant p.Phe381Val
G/A 59757557 synonymous_variant p.Cys378Cys
A/G 59757561 missense_variant p.Phe377Ser
C/T 59757581 synonymous_variant p.Leu370Leu
A/G 59757586 missense_variant p.Phe369Leu
A/T 59757599 synonymous_variant p.Leu364Leu
G/T 59757610 missense_variant p.Gln361Lys
G/T 59757611 missense_variant p.Phe360Leu
A/T 59757620 synonymous_variant p.Ser357Ser
A/G,* 59757630 missense_variant p.Leu354Ser
G/T 59757638 missense_variant p.His351Gln
T/C 59757639 missense_variant p.His351Arg
C/T 59757643 missense_variant p.Ala350Thr
G/A 59757666 missense_variant p.Pro342Leu
C/G 59757673 splice_region_variant&intron_variant
C/T 59757687 intron_variant
G/C 59757688 intron_variant
G/A 59757698 intron_variant
C/A 59757703 intron_variant
T/C 59757713 intron_variant
C/A 59757714 intron_variant
C/T 59757717 intron_variant
T/G 59757738 intron_variant
C/T 59757747 splice_region_variant&intron_variant
G/A 59757753 synonymous_variant p.Pro339Pro
A/G 59757782 missense_variant p.Ser330Pro
C/T 59757916 missense_variant p.Arg285His
G/A 59758161 intron_variant
T/C 59758166 intron_variant
C/T 59758189 intron_variant
T/C 59758220 intron_variant
A/G 59758225 intron_variant
G/T 59758280 intron_variant
C/G 59758286 intron_variant
C/T 59758476 intron_variant
T/C 59758479 intron_variant
C/A 59758484 intron_variant
T/A 59758560 intron_variant
T/C 59758587 intron_variant
A/G 59758597 intron_variant
A/G 59758601 intron_variant
T/C 59758630 synonymous_variant p.Gly234Gly
C/T 59758632 missense_variant p.Gly234Arg
T/A 59758636 stop_lost p.Ter232Cysext*?
A/T 59758641 stop_lost p.Ter231Lysext*?
T/G,C 59758642 stop_lost p.Ter230Trpext*?
G/C 59758645 synonymous_variant p.Gly229Gly
T/C 59758651 synonymous_variant p.Val227Val
A/C 59758652 missense_variant p.Val227Gly
A/C 59758680 stop_lost p.Ter218Glyext*?
G/A 59758683 missense_variant p.Pro217Ser
G/T 59758684 synonymous_variant p.Ile216Ile
A/G 59758709 missense_variant p.Leu208Pro
C/T 59758714 synonymous_variant p.Leu206Leu
A/C 59758715 missense_variant p.Leu206Trp
A/G 59758716 synonymous_variant p.Leu206Leu
A/T 59758773 intron_variant
A/T 59758811 intron_variant
T/A 59758856 missense_variant p.Asn183Tyr
T/G 59758859 missense_variant p.Met182Leu
T/A 59758861 missense_variant p.Glu181Val
C/T 59758862 missense_variant p.Glu181Lys
C/T 59758863 synonymous_variant p.Val180Val
A/T 59758864 missense_variant p.Val180Glu
C/G,T 59758865 missense_variant p.Val180Leu
T/C 59758871 missense_variant p.Ile178Val
A/C 59758872 missense_variant p.Cys177Trp
C/G 59758873 missense_variant p.Cys177Ser
T/A 59758898 missense_variant p.Arg169Trp
A/C 59758900 missense_variant p.Leu168Trp
A/G 59758912 missense_variant p.Phe164Ser
A/G 59758929 synonymous_variant p.Thr158Thr
T/C 59758931 missense_variant p.Thr158Ala
T/C 59758932 synonymous_variant p.Gly157Gly
C/A,* 59758936 missense_variant p.Gly156Val
T/A,G 59758943 missense_variant p.Thr154Ser
C/A 59758944 missense_variant p.Leu153Phe
G/A 59758949 missense_variant p.Pro152Ser
T/C 59758953 stop_lost p.Ter150Trpext*?
A/T,* 59758960 missense_variant p.Val148Glu
T/C 59758966 missense_variant p.Tyr146Cys
A/T 59758996 intron_variant
T/G 59759031 intron_variant
A/G 59759037 intron_variant
T/G 59759074 intron_variant
G/A 59759090 intron_variant
A/T 59759105 intron_variant
A/T 59759117 intron_variant
A/T 59759136 intron_variant
C/T 59759228 missense_variant p.Gly136Glu
A/G 59759237 missense_variant p.Ile133Thr
T/G 59759240 missense_variant p.Tyr132Ser
G/A 59759248 synonymous_variant p.Cys129Cys
A/C 59759250 missense_variant p.Cys129Gly
G/A 59759251 synonymous_variant p.Cys128Cys
G/C 59759254 stop_gained p.Tyr127*
T/C 59759255 missense_variant p.Tyr127Cys
G/A 59759261 missense_variant p.Ala125Val
C/A 59759262 missense_variant p.Ala125Ser
G/C 59759279 stop_gained p.Ser119*
T/C 59759286 missense_variant p.Thr117Ala
C/G 59759288 missense_variant p.Arg116Pro
G/A 59759297 missense_variant p.Ala113Val
A/G 59759339 intron_variant
T/G 59759341 intron_variant
C/T 59759342 intron_variant
A/G 59759344 intron_variant
A/C 59759347 intron_variant
G/T,C 59759361 intron_variant
T/A 59759363 intron_variant
G/A 59759366 intron_variant
T/C 59759367 intron_variant
A/G 59759386 intron_variant
G/A 59759387 intron_variant
A/C 59759395 intron_variant
T/A 59759399 intron_variant
A/T 59759405 splice_region_variant&intron_variant
C/T,* 59759415 missense_variant p.Ala111Thr
C/T 59759419 synonymous_variant p.Gly109Gly
A/C 59759437 missense_variant p.Asn103Lys
G/A 59759440 synonymous_variant p.Asn102Asn
T/C 59759441 missense_variant p.Asn102Ser
T/A,G 59759444 missense_variant p.Tyr101Phe
A/T,G 59759445 missense_variant p.Tyr101His
T/C 59759446 synonymous_variant p.Ser100Ser
A/G 59759448 missense_variant p.Ser100Pro
A/T 59759451 missense_variant p.Leu99Met
G/T 59759458 missense_variant p.Asn96Lys
T/C 59759460 missense_variant p.Asn96Asp
G/A 59759480 missense_variant p.Ser89Phe
C/T 59759487 missense_variant p.Asp87Asn
G/A 59759491 synonymous_variant p.Tyr85Tyr
G/A,* 59759514 missense_variant p.Pro78Ser
C/G,* 59759515 missense_variant p.Lys77Asn
T/C,* 59759529 missense_variant p.Arg73Gly
A/T 59759581 stop_gained p.Tyr55*
A/C 59759583 missense_variant p.Tyr55Asp
C/G 59759604 missense_variant p.Asp48His
A/T 59759614 synonymous_variant p.Ser44Ser
T/C 59759637 missense_variant p.Ile37Val
G/C 59759642 missense_variant p.Ser35Trp
G/T 59759645 missense_variant p.Ser34Tyr
G/T 59759649 missense_variant p.Leu33Ile
T/A 59759674 synonymous_variant p.Ser24Ser
C/A 59759743 start_lost p.Met1?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18555.1
MCCEGCWKEEKQALLGLPLDDTFSWNFYPDSFLSSNIDTDSFISWNVDTDCCEWYGVFCNSSTGRVAQLHLDRVWWKPTEQYINYSDFSVFKDLKNLSLSYNNIVGCVGDAELPNLELLHMSDNKLDTAASIISCLDGLPSLNVPKLRSNLKALDIRWNYLTNDILPSLEGFTSLKELYLGGNELDSDLHFEGLCSALRNLEVLDISWNYLTNDILPSLEGFTSLKELYLADNELDSDLHFEAHPWPSTGERATIPSRAQPSPAKRETQTDPKTETPLLHHRASHHVSTFFHHHHRTCNSTTKTLNRATVNRIPKACRPRVRLGLMQFALLPEARFLNWIPVASRSVFAHGGSHPVAMVFPFPISTYSADFSGRGFVGVLQIFLDSLDDKKNGKDQILKPMKVRSPAVCSKDSKNFMSPTISASCKINESPPKENPT*


CDS Sequence:
>Vu_18555.1
ATGTGCTGTGAAGGATGTTGGAAAGAAGAGAAACAAGCACTTTTGGGTCTACCTTTAGATGATACTTTCTCATGGAACTTCTACCCAGATTCTTTCCTCTCTTCGAACATCGACACAGATTCTTTCATCTCTTGGAACGTCGACACAGATTGCTGTGAATGGTATGGAGTGTTCTGCAACTCCTCCACAGGGAGAGTGGCCCAACTCCATCTTGACAGGGTCTGGTGGAAGCCAACAGAACAATATATTAATTACTCGGATTTTTCTGTCTTCAAAGATTTGAAGAACCTCTCCTTGTCATATAACAATATAGTTGGTTGTGTTGGGGATGCAGAGTTGCCAAATCTCGAACTCCTTCACATGTCTGATAACAAGCTGGATACTGCTGCCAGTATTATATCTTGTTTGGATGGCCTTCCATCTCTTAATGTACCAAAGCTACGTAGTAATCTGAAGGCCCTTGACATAAGGTGGAACTATTTGACTAATGACATTTTGCCATCCCTTGAGGGATTCACATCTTTAAAGGAACTGTATTTGGGTGGAAATGAATTGGACTCGGATCTTCACTTTGAAGGTTTATGCTCAGCACTGAGGAATCTAGAGGTCCTTGACATAAGTTGGAACTATTTGACTAATGACATCTTGCCATCCCTTGAGGGATTCACATCTTTAAAGGAACTGTATTTGGCTGATAATGAATTGGACTCGGATCTTCACTTTGAAGCACATCCATGGCCGTCAACCGGAGAACGCGCAACCATTCCAAGTCGCGCACAACCATCACCTGCAAAGAGGGAAACTCAAACAGATCCAAAAACAGAAACCCCTCTTCTCCACCATCGCGCCAGCCACCACGTTTCAACCTTCTTCCATCACCATCACCGGACCTGCAACTCTACAACAAAAACCCTTAATCGCGCCACCGTCAACAGAATCCCTAAAGCATGCCGCCCCCGTGTGCGATTAGGGTTGATGCAGTTCGCGTTGCTTCCGGAGGCGCGATTTCTGAATTGGATCCCTGTGGCTTCCCGTTCAGTGTTCGCACATGGAGGCTCACATCCCGTTGCCATGGTCTTCCCGTTTCCAATCTCTACTTATTCTGCAGATTTTTCTGGAAGAGGCTTTGTTGGTGTTCTGCAGATTTTTCTAGACTCCTTGGATGACAAAAAAAATGGGAAAGATCAAATTTTGAAACCTATGAAGGTTCGATCACCAGCTGTTTGTTCAAAGGACTCAAAGAATTTCATGTCTCCAACCATTTCTGCTTCTTGCAAGATCAATGAGTCTCCCCCGAAAGAGAACCCTACCTGA


Promoter Sequence:
>Vu_18555::LG4:59759745-59761745(-)
GTCAGAAGTATAGTCATCTCTATCATAAATCTATTAGTGGTCTCTGATTGTCAAACACAAGATAAAAAATCAAAAAGTTTGAAAGAATGACATAAAATGTCTATAAAAGGTTTTAAAGTGATAGTAACTCTTGTAAGATGAAACTCGTTCAATAAAAACCTTCATTTATAATATAAATATTATTAATAAAATAGTTGAGTGTCAAAGATTACTACTATTCTTTGTTATTTTCTAATCCTTACATAATTAAATAAATAAATTATCTTATAATTAAATTTTATGATAAAATAAATATTGTTAAATATATAAACTATATTTTAAATTTAATAATTTATATTAATGTAATATCTTATAGTTATATTATAATTATTGAGACATGTCCATGTATATCTTGGATTGAAGTTGGTGGTGGATGAAGTCAAGTCATCGTTTTTTTTTCTTCGTCTTATATGTTTTAACTATTAATATTTATTTTAATTAAATAAAATCGGTAATCAACAAACATTTAAATTGTATGCTTTATATTACGATTAAAAGCAATGATAAATCTATTTTTTTTTTAAATATGAGTTGTATTTTAGATTTCTAAACAAGATTTCATATTATGAAAATTTATTTTATTAATTATAACACAATTATTGATTTATGTTTATCTTGAATTCTATTTGAAGATGATTGTGACTTTTGGTTGGATAAGTCACCCTTTGGGTGGACTAAATAATAAACTATACTTTAGTGAATATATATATATATATATATATATATATATATATATTATATATATATATACATATTTGTCTTATATAATTAAAATTAAAATTAAATAAATAATACTTAATTGAATAATATTAATTATACTATGTTTAAATTTATGATAACCTAATAGTTTTAAGTGTATAAATTATATTTTCAATTTATAAAAATAATCTATATTGATATGACTTTATTTTTAATTATAGAATAATTGTAGACGTATGTCTATTTTGGATTTCACTTGGTGTTGGTTTTGGCTTATTAGTTGACGTGAAATCAATTTTGTTTTAATTTTTTTTGAGTCTTTATATGTTTTAACAATTATTAATAAGAAGGTCAATATATAATTATTTTTCATAATTAAAATAAATAATTACCTTTTGTTTACAAAAACGTATTATAAATTTATGAAGGATAATTATTAAATATATAAATTATATTTATTTAACATTTATAAGTAATTTAAATAGTGTAAATTTATTTTTAATTATAACATAATTGTTGAGAAATGTATGTTTCAGATTCATCTTGAACTTTGAGTTGAGCTCATGTTATCATCTATAAAAAAAGGTTTTCTCTTTCTAATGTGTAATTATTATTATTTTTAATTTTAAACGTTTAGTATTTTTTTAAAATTCATATAATTAATAATAATAAAATAATTACTTATATTTTTATCGTAACAACCTTTTTAAAATTTAAATAATTATTCATAATGAAAAAATTGTTTACACAATAAAATAGTTATCTATAAATAAATTATAAAAATTAATCACTTTTATAATTATCTTTTATAAATATTATTTTATAATTTATTGATGCTTTTATTTTAATAAATAAAATTTATTTTATAATTTAATAAATTGGAAAACTATAAAATTAAAAAGTATCAAAGTAAATCTGGTGGAATAAACAATCCTTAAAATTTTCTCGTTCAAATAAGCATTATAATTCATATATTAAAAAAACAGAATGAATGTATTTTCATTAGTTTTTTTTAAGCCGTCTCTTGTTTTTTTTATTTTTATAGAAATGAATTAAATCGGTTTCTCTAAAAATTAAAAAGTCACTTAGCAAAACTTACACATGGACTTTCTAATTCAAATTGAAAGTATAGATGCATTGGAACATAAAGTATGTATAGGTGATGCTTTCCTATTTAAGAGACGGAGAAGTTGTTCATTCAATGAAGAAAAAAAATGAAGAGTGTGAGAGTGTGTTTCCTAATTTTCCTTTTATTGGAAACA


Gene Sequence:
>Vu_18555(-)
ATGTGCTGTGAAGGATGTTGGAAAGAAGAGAAACAAGCACTTTTGGGTCTACCTTTAGATGATACTTTCTCATGGAACTTCTACCCAGATTCTTTCCTCTCTTCGAACATCGACACAGATTCTTTCATCTCTTGGAACGTCGACACAGATTGCTGTGAATGGTATGGAGTGTTCTGCAACTCCTCCACAGGGAGAGTGGCCCAACTCCATCTTGACAGGGTCTGGTGGAAGCCAACAGAACAATATATTAATTACTCGGATTTTTCTGTCTTCAAAGATTTGAAGAACCTCTCCTTGTCATATAACAATATAGTTGGTTGTGTTGGGGATGCAGGTATTCTTTCCTATAATTCTATTGCTCTTTGCTTACTCAAAACTACAAATCTGTCTGTTATGTTTTATGGAATACTCATTATTTCAACTTTCTTTTACATACTTTCCAGAGTTGCCAAATCTCGAACTCCTTCACATGTCTGATAACAAGCTGGATACTGCTGCCAGTATTATATCTTGTTTGGATGGCCTTCCATCTCTTAAGTATCTTTATTTAAGAGATAACAGGTTCAATACATCTTCATTAAACCACGGTGAGACTAGCTATTTTTTATTTTTTTAAGAAAATGACAACTATATTATTTTTTATTATCATGAAGATCTTCTAATTTTTTATAATATATATATATATATATATATATATATATATCTTTTTTTTCAAATTTGTTGGGTTCTTTCACAACTTTTGGTGTGTATATGTAAGTTTTTGAAAGTGTACCAAAGCTACGTAGTAATCTGAAGGCCCTTGACATAAGGTGGAACTATTTGACTAATGACATTTTGCCATCCCTTGAGGGATTCACATCTTTAAAGGAACTGTATTTGGGTGGAAATGAATTGGACTCGGATCTTCACTTTGAAGGTAACTTTTCCATTTCATTAATAAGGCTGAGTAATTGTTAATTAATGGATGATATATTCCTTGCTTGCAGGTTTATGCTCAGCACTGAGGAATCTAGAGGTCCTTGACATAAGTTGGAACTATTTGACTAATGACATCTTGCCATCCCTTGAGGGATTCACATCTTTAAAGGAACTGTATTTGGCTGATAATGAATTGGACTCGGATCTTCACTTTGAAGGTAACTTTTCCATTTCATTAATAAAGCTGAGCATTTTTACGTTTTAATTAACGAACACTAGTAAAAAAAGACTTTTTTAACGCGCTATATATGCCTCGGTTCTACTGAAACCGAAGCGTATAAAAGTGCGATGGCATTTCAGTAATTATTGAGTGGTTATATGCCTCGGTTATATATGAACCGATGCCTATAGATGTTACTGTCTCAGTAGAAGGCCAACCGGGTTTAGACCCCGGTTTGGGGTTTAGGCACCGGTTTTAAATATAACCGAGGTTAAAAACCAAACTTCGCCTCTCACACCTCGCACTCTCGCGATTCTCACCGTCCGCCTCACGATTTCTCCTTTCCCCCAAACTCCACTCTCCCCCAAACTCCAGCACCAGGTCGCCACCACCACCAGCCATCGCCGCAAGCACCGCCGTTCAACCACGCCGTTGGCCACCATGCGCAAACCCGCAAGCCGCCACCACGCGCAAACCCGCAAGCCGCCACCACAGCGCCTTCGTTCTCGTCCAAACTCCATGGACGCCGCGATCACCATCTTCATCTTCTCCGCCATAAGCACATCCATGGCCGTCAACCGGAGAACGCGCAACCATTCCAAGTCGCGCACAACCATCACCTGCAAAGAGGGAAACTCAAACAGATCCAAAAACAGAAACCCCTCTTCTCCACCATCGCGCCAGCCACCACGTTTCAACCTTCTTCCATCACCATCACCGGACCTGCAACTCTACAACAAAAACCCTTAATCGCGCCACCGTCAACAGAATCCCTAAAGCATGCCGCCCCCGTGTGCGATTAGGGTTGATGCAGTTCGCGTTGCTTCCGGAGGCGCGATTTCTGAATTGGATCCCTGTGTGATGGTTATATGGTGTTAAATCTGGTTTCTGCAGATCTGATTGTGGTTGCAGGTGGAGGCGCGATTTTGATTTAGGGCTTCCCGTTCAGTGTTCGCACATGGAGGCTCACATCCCGTTGCCATGGTCTTCCCGTTTCCAATCTCTACTTATTCTGCAGATTTTTCTGGAAGAGGCTTTGTTGGTGTTCTGCAGATTTTTCTAGACTCCTTGGATGACAAAAAAAATGGGAAAGATCAAATTTTGAAACCTATGAAGGTTCGATCACCAGCTGTTTGTTCAAAGGACTCAAAGAATTTCATGTCTCCAACCATTTCTGCTTCTTGCAAGATCAATGAGTCTCCCCCGAAAGAGAACCCTACCTGA