Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_18525	LG4	59025844	59027373	hypothetical protein LR48	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	gravitropism, radial pattern formation, gravitropism, cell redox homeostasis, root development, bundle sheath cell fate specification, regulation of transcription, DNA-templated, bundle sheath cell fate specification, regulation of transcription, DNA-templated, asymmetric cell division, bundle sheath cell fate specification, leaf development, leaf development, bundle sheath cell fate specification, radial pattern formation, asymmetric cell division, cell redox homeostasis, maintenance of protein location in nucleus, regulation of transcription, DNA-templated, leaf development, gravitropism, root development, leaf development, gravitropism, asymmetric cell division, regulation of transcription, DNA-templated, maintenance of protein location in nucleus
Cellular Component	is active in	nucleus
Cellular Component	located in	nucleus, nucleus, nucleus
Molecular Function	enables	DNA-binding transcription factor activity, protein binding, sequence-specific DNA binding, DNA-binding transcription factor activity, sequence-specific DNA binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity

No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_18525.1

MMKVGFELVHANYNPNMIRSHMHETWDHYSNIITSLPFSAPTPSNLYPKPATENQCLNMGQNEVSDWMEEHIDDITKHLVEDLPETTSDSLVPNNTTRVSHHNLVPSLLPNLISERKASGFRPQFEAITNVHSGLDHSYNVCDQGLSLISLLMECAVAISVDNLGEAHRMLLELTQMASPYKASCGERVVAYFTKAMTCRVMNSWLGMCSPLLDHRNINSAFQVFNNVSPFIKFAHFTSNQAILEAVNHCDSIHIIDLDIMQGLQWPAFFHILATRMEGPPQVTMTCFGTSTELLVETGKQLSNFARRLGMSFKFHPIASKFGEVIDVSMLHVKPGEALAVHWLQHSLYDATGPDWKTLRLLEELEPRIITLVEQDVNHGGSFLDRFVGSLHYYSTLFDSLGAYLHFDDENRHRVEHALLSREINNVLAIGGPKRNGEDKFRQWRRELANHYFQQIPMSANSMAQAQLILNMFSPAYGYSLAQVDGTLRLGWKDTSLYTASAWTCCTSN*

CDS Sequence:
>Vu_18525.1

ATGATGAAAGTGGGATTCGAGCTGGTTCATGCAAATTATAATCCAAACATGATTCGTTCGCACATGCATGAAACATGGGATCACTACTCAAATATTATTACTTCCTTGCCATTTTCGGCTCCAACCCCATCAAACCTATATCCAAAGCCAGCAACAGAAAACCAGTGCCTAAACATGGGGCAGAATGAAGTCTCTGATTGGATGGAGGAACACATTGATGACATCACTAAACACCTTGTTGAAGACTTACCAGAAACCACTTCTGATAGCTTGGTGCCAAATAACACAACAAGGGTTTCCCATCACAACCTTGTTCCCTCACTTTTACCCAACTTGATCAGTGAAAGAAAAGCTTCAGGCTTTAGACCCCAATTTGAGGCCATCACCAATGTTCACTCAGGTTTAGATCATAGCTACAATGTCTGTGATCAAGGGTTGAGCCTCATAAGCCTTCTAATGGAGTGTGCAGTGGCAATTTCAGTCGACAACCTGGGTGAGGCTCATAGGATGTTACTAGAGCTAACACAAATGGCCTCACCCTACAAAGCATCGTGTGGTGAACGCGTTGTTGCTTATTTTACCAAGGCCATGACTTGCAGGGTCATGAATTCTTGGCTTGGGATGTGTTCCCCTTTGCTTGATCACAGAAACATTAACTCAGCATTCCAAGTCTTCAACAACGTTTCCCCTTTCATAAAATTTGCTCACTTCACTTCCAACCAGGCAATCCTTGAGGCAGTAAACCATTGTGACAGTATTCACATAATCGACTTGGACATCATGCAAGGCCTGCAATGGCCAGCTTTTTTCCATATATTAGCCACCAGAATGGAGGGTCCACCACAGGTAACCATGACATGCTTCGGAACCTCAACGGAACTCCTCGTTGAAACTGGGAAACAGCTCTCCAACTTTGCAAGAAGGCTTGGCATGTCATTCAAGTTCCACCCCATTGCAAGCAAGTTTGGGGAAGTAATCGATGTGTCTATGCTGCATGTAAAGCCTGGCGAGGCACTGGCAGTGCATTGGTTGCAGCATTCACTGTACGATGCAACTGGACCTGATTGGAAAACACTAAGGCTCCTTGAGGAGTTGGAGCCAAGAATAATCACCTTGGTGGAGCAAGATGTGAACCATGGAGGCTCATTCTTGGATCGTTTTGTGGGCTCCTTGCACTACTACTCCACCCTATTTGATTCTCTTGGAGCATACTTACACTTTGATGATGAAAACAGGCACCGTGTGGAGCATGCCCTTCTCTCTAGGGAAATCAACAATGTGTTGGCCATAGGAGGCCCTAAGAGGAACGGTGAAGACAAGTTTAGGCAGTGGAGAAGAGAGCTTGCTAACCACTATTTTCAGCAGATTCCCATGAGTGCCAATTCAATGGCTCAAGCTCAGTTGATATTGAACATGTTCTCACCAGCTTATGGGTATAGTCTTGCACAAGTTGATGGCACATTAAGGCTTGGATGGAAGGATACAAGTTTGTACACAGCTTCTGCATGGACCTGTTGTACTTCTAACTAG

Promoter Sequence:
>Vu_18525::LG4:59023844-59025844(+)

CCTCAAATAATCTCAAATATTTTTCAGCTTAAAGATATTATTAACCTTGACATTCCAGTTTTGATCATACCGAAGATGCATCTGCTATTACGTATCATAGTCTGTATATTTTGTTTACGTTCTTAATTTGGACTGTGTTTTGATAGAAAAAAGTAAACGAATTGGCACATACTTCCTACTCAAAATATATTTTTTAAAATAGTGAAATTATAACAGGCGAAATTTGCATCAAATTTGCAATTGATTAATTGATCAATAGTTTACAGCAAAATTTATGTTTTCCCTTTTCTAAATCATGCGTACTTAAAGCAACAAATAGTGCCTCAACACATGTTTGAGGGAAGGAAAAAAAAGGTTAAATATTGTCGTATTCATATTAAAACCGCACCAATATATGTGATTGTTATGATTGATTGGTGCAAGAGCATTCCAAGGAAAACTTATTCGAATATTCTGTCCAGATTTCAGAGATGACATATGCCTTATTTTATCTTTAAAATATTTATTAATTTTTTTACATTTCTTCTATAAAACGTGATTTTATTATTTTATTATTTTCATCTACTTATATACCATGGTTTTATATTTTTATCTAAGATAAAAATGTCTCATTTTTATCTTTTACTTATATAAGATATTGACAAAGGATGTAAAATAAATTTCTCATCATTACTATTTAGATACTTTTAGTTTACAATAGTTTACTAATATTGATAAATGGCAGAATTGTTATAACTAAAAGAATTAACATATATATAAAAGATTATAAAAATTCAAAACTAATTAAAAATGAAAAATTAAACTGTGTTTACCTAGAATCAACACATTTTGACTGCCTCCTTTAGCTCCAACATTTGATTTCTTCTCATATTTACAGTGTGACACTCACACTTCTTTTTTAATGCATTGGAATGGTTCCTTGCTTTATTTCTTTACTTCTTTTTTTTCTAAATATAAAATAATTGCATTCTCCTGCATACTCATTCCCTATGAAGCAGCCTTGATGAGGAAAATGTCAAACTTACATAAGAATTATATCACAAAACACCATGAAACAGCCCACGGATAATAACACCATTATTTTTCATGTGCCGTGTCGTTTAAAGCATGATATTTAACTTCATCTTCTTTACTAATCAAAATTAGACATCAATAATCTTTCTATATTAAACTGTCATTGTAGCATGGTAAAATAATTGGGACGGTCCTTCCATACCCATTCACCCTTAATAAACTAACATAACCTTCGCTTTCTTCTAAAAGGTGGTTTAATAATTACTCAATTAATATATCTTATTCTCGGTTAATAATGAAAAGGAAATTTTAAAGAAGAATGCCACTAAATAAATATCTACAAGGGAAGGATTGAAAAGTGTTGAAGTAAAAAGCAGAACTGATATGATAAATGTGTACTGTGTACGAAAAGCAATTTCCATTTCGTTCCTAATTCCTCAGTGGCTTTGCGAAGTCAGAGAGGATTAAGATAAACAAGTGAAAAGCAATTTTCACTACAGTTTATGATGACATTAATCATATTATTATTTATATAGGGTAGTTGCTCCTTCTCCATCACCATGTCACCACAAACAAAAACGTCACTCTCCATGCTATTCACATCAGCTTTGAAAAATAGCTCAAAGTTAAGACATGTAATAAAAAGCTTACAAACATTTAAGTTCATTACTATAATAGTAAAATCACTGCCAAATCGACGTGTAATGATTAGGCTTCTAGCCACTTATCTTTTTCTTAGTGGCTTTATTATGCCGGCCAGCCCCTGGAATTGGCAATGTCATTGACAATACAATACAAAACAACACAATAAACTCTTTTTTTCTTTTTTTATCGTCAAACTTTGCCTTTAAAAGTGGCACAAGCCTATTCTTCAAAGCCCCTCTTACACCTTCTCCTCCCTTGTTCCTCTTCTTTTGTGTTTTGCTCTTGTTTCTTTTCCCTATCTCAATAATTTATTACATTTCTTGCATTATTTGATCCTTGTA

Gene Sequence:

>Vu_18525(+)