Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18467 LG4 57520437 57521982 Wall-associated receptor kinase
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 57520439 stop_lost&splice_region_variant p.Ter380Glnext*?
A/T 57520469 missense_variant p.Trp370Arg
A/C 57520474 missense_variant p.Val368Gly
T/C 57520501 missense_variant p.Tyr359Cys
T/C 57520539 synonymous_variant p.Arg346Arg
T/A,* 57520565 stop_gained p.Arg338*
C/T 57520569 missense_variant p.Met336Ile
A/T 57520570 missense_variant p.Met336Lys
C/A,* 57520572 missense_variant p.Trp335Cys
C/A,* 57520573 missense_variant p.Trp335Leu
A/C 57520578 synonymous_variant p.Arg333Arg
C/T 57520579 missense_variant p.Arg333His
C/T 57520719 intron_variant
G/A 57520835 stop_gained p.Gln278*
C/A 57520960 missense_variant p.Trp236Leu
A/G 57521136 synonymous_variant p.Gly177Gly
C/T 57521137 missense_variant p.Gly177Asp
C/T 57521167 intron_variant
A/G 57521224 intron_variant
T/A 57521234 intron_variant
T/G 57521244 intron_variant
T/C 57521256 intron_variant
C/A 57521448 intron_variant
A/G 57521450 splice_region_variant&intron_variant
G/A 57521514 missense_variant p.His157Tyr
G/A 57521547 missense_variant p.His146Tyr
T/C 57521583 missense_variant p.Ile134Val
G/A 57521584 synonymous_variant p.Tyr133Tyr
G/A 57521590 synonymous_variant p.Tyr131Tyr
G/A 57521598 synonymous_variant p.Leu129Leu
T/C 57521648 missense_variant p.Lys112Arg
C/T 57521651 missense_variant p.Arg111His
C/G 57521661 missense_variant p.Glu108Gln
G/A 57521704 synonymous_variant p.Thr93Thr
G/A,* 57521756 missense_variant p.Thr76Ile
C/T,* 57521760 missense_variant p.Gly75Arg
G/A 57521796 synonymous_variant p.Leu63Leu
G/A 57521807 missense_variant p.Ser59Phe
T/C 57521840 missense_variant p.Asp48Gly
C/T 57521867 missense_variant p.Ser39Asn
C/T 57521913 missense_variant p.Glu24Lys
C/G 57521919 missense_variant p.Ala22Pro
C/A 57521924 missense_variant p.Gly20Val
C/T 57521925 missense_variant p.Gly20Arg
G/T 57521930 missense_variant p.Ala18Glu
C/T 57521941 synonymous_variant p.Lys14Lys
G/A 57521950 synonymous_variant p.Phe11Phe
T/C 57521961 missense_variant p.Arg8Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18467.1
MFVLAITRVIFYKKHNQAKGKAKEAKINKRKEVSSVKASALSSRIFTDREIRKATNDFSRENLIGTGGFGEVFKGTFDDGTVFSIKRAKLGSTKGIDQMQNEVRILCEVNRKSLVKLLGCCLELEHPLLIYEYISNGTLFYYLHRHSCGTREPLKLHQRLKIAHQTAEGLSYQHQITVAEHFTQTRSLLVSTSRRRRHGGDGEASEEQALEGNEDGRVFEQEPLELERGPDADEKGGVVAKERGDGSHDDEGVEGGEEGGGGKEEEGGLGEDKGEPHDKEGGGLEAEGVEDGDNGGSGGGGGSGGGGDAIVVDVTQRQRVGVVTFLGRRRRRGRCWMWRGLCEGEMRRWRRRSGGGGEGYMRVKCARTVLWKDRVYCLGS*


CDS Sequence:
>Vu_18467.1
ATGTTTGTTCTAGCAATCACAAGAGTGATCTTCTACAAGAAGCATAACCAAGCAAAAGGAAAAGCAAAGGAGGCTAAAATTAATAAGAGAAAAGAAGTCTCAAGTGTGAAAGCCAGTGCTTTATCATCAAGAATCTTCACTGACAGAGAGATAAGAAAGGCAACGAACGATTTCTCCCGAGAAAATCTGATTGGAACTGGTGGATTCGGTGAAGTGTTCAAGGGGACATTCGATGATGGAACCGTGTTTTCCATCAAGCGTGCGAAGCTTGGAAGCACCAAAGGCATTGATCAGATGCAAAACGAGGTTCGAATTCTGTGCGAAGTAAACCGCAAAAGCTTGGTGAAACTCCTTGGTTGTTGCTTGGAACTTGAACACCCTTTGCTGATATACGAGTACATTTCAAATGGGACCCTTTTTTATTACCTTCATCGCCATTCTTGTGGCACAAGGGAACCCCTGAAATTGCACCAAAGACTCAAAATTGCACACCAAACAGCCGAAGGGCTTTCATATCAACATCAAATTACGGTAGCGGAGCATTTCACCCAGACAAGGTCGTTGCTGGTGTCAACCAGCAGGAGGAGGCGTCACGGCGGAGACGGGGAGGCAAGCGAAGAGCAGGCCCTCGAGGGCAACGAAGATGGAAGGGTTTTCGAGCAGGAGCCACTTGAACTAGAGAGAGGACCAGACGCCGATGAGAAAGGTGGTGTGGTCGCAAAGGAAAGAGGCGATGGCAGCCACGACGATGAAGGAGTTGAAGGTGGCGAGGAGGGAGGAGGAGGCAAAGAGGAAGAAGGCGGGCTCGGCGAAGATAAGGGAGAACCACACGACAAAGAAGGCGGCGGGCTTGAGGCTGAGGGCGTCGAGGATGGTGACAACGGGGGATCTGGAGGAGGTGGAGGAAGCGGAGGTGGAGGAGACGCCATTGTCGTGGACGTGACGCAACGACAAAGGGTGGGAGTCGTTACGTTTTTGGGGAGGAGGAGAAGAAGGGGGCGTTGTTGGATGTGGAGAGGGTTATGTGAGGGTGAAATGCGAAGGTGGAGGAGAAGAAGCGGAGGTGGAGGAGAGGGTTATATGAGGGTGAAATGCGCGAGGACAGTGTTATGGAAAGATAGGGTATATTGCCTCGGGTCCTAG


Promoter Sequence:
>Vu_18467::LG4:57521982-57523982(-)
TTTAGAAAGTGGCATTAACATTAATGAAGAAAGACGAATTCATAAATACATGAGAGTAAATTAGATGAAATCTAAACCCCAACAACAATATCATCAACTTCATTCATTCATTCTCTTGTTTAGCATCAATTGATCAAATTGCATTCATAATTAGTTGAGTAATCACATAACTGTTTAGTGCCGTGAGTCTCTTGAGAAACGATATTTGGTCTTACCAATTATTATTACTTGATACGATTCGGTACACTTTTTAACCCTCGGCAAGTGTAACCGAATCGTATCAAGTAATAAAATTGGTAAGACCAAGTATCGTTTTCCCAAAGGACTCACGGCCTAGATAGTTATGTGATTTATAGATTATGTAAGACTTATAGAACCAATTCTTGTAGATTTTAAATGCAAAATACTTGAAAGTAAATATGAATGCATGTATTGATCCATGGGCAAGGAGAAACAGAACACGTGGTTTGAAATATATGAATGAATATGTTGTTGGGGGTTATCAACTTCATCCTATCCACTCTCATTGTAATCAAGAATTCATCTTTCTTTGTTAATTGTTAATGCCACTTTCTAAATTACCTTAAACCCGATGTCTCGGCGAAGAAAGCCTAATCATAATCACTAGTTTACAATGTCTTATCTCCCTAGCAATTACTCATGCATTACACAACACAGAAGCTTAAAGGCAACCAACCATCGTACTCCTATGTCTACGTTTCCCCAGATCTAGATTTCCCCGTATGTGTCCATATCGGCAAAATCAATAATCATGACATCGAATGAGTTAAACAATGCATGCTTTGACCAACGAGGAAAAGCCCTAACAATTAATAAAAGAAAGAATGTATCTTAAAAAAGATCTTGAAGAACAAATTCAATACATGAGAGCTTCAAAGGATTACATTGATTCCCCAACAACAATAAAGGTTTAGTTAACCATATTCATGGTGAAACTAGATGAAATACAATGAAAGAGTTGAAGATAAAACCCTAGAAAGGTGAGAAAGGAGCTGTAGCATCCAAAATCCTCCTCCAAGGGGTGAAAGAGTGTGTTTCTGCTTCGTCCCAGCCAAAGATGCTTGACCTAGGTTAACTAAAACCTTATATATTATTCTAAAAATTACAGAAAAGTAAGCCCAAGCCCATAAGAGTGCCGCTCAGCGGTAAATACCGCTCAGCGGTAAGCGTGTGACTACTATTCTGCCCCTCAGCTACAGTTTTGCCCCTCAGCGGTGTCTGGGGGTCTTCAAAGTGCCGCTCAGTGGTAAATGGCGCTGAGCGGTACTTTCGGCTTCTCCCTTTTATGCACTTTTTCTTCCTTTTCTGAATCTAACTCTTAGCTCCTTCACTTCTTTCGCTCAATTCATCTCAAAAACCTGCAAAAACAAGGAAATCAAGCATAAAACTTGTCCAACTCTCTTATTTACATAACTTCAACAGAAACATGATTCCAAACTAGTTTCTAAGTCATAAAGGTTGTCTTTAAGGTCAAATTTTAGTGTAAAAATAACAGTTTTTCAACTGTTATCACAACCCCAAACACTAGTGCAGTAAAGGGAAACGACAATTGTTATTTTTACCTATCTGCACCGGTTCTGCAGCCGAGGCATATACAAGCGAGGTAAAATGTCTATCACTTTTCGCCTCGGGTCTGAACCGAGGCAAACAAATGTATGCTTTTGCCTCGGTCCAAATGCAACTGAGGCCATGGAGGTGTTTACCATGCGATAGAGGGGGTCTTATGTGTGTATCAGCCTCTTTAGTTTTCTTCTGCTATATGCCAACATTTAATAGTTCTGATCACGTGCGATACAATTTTTCAAGACATAAAAATAAACCCTTTATTAGTGGGAAATTTTCTATTACTTGATGGTGAGATGATACACACTAAATAACAGTAAGATAAATCATGAAAATGAAGATAAAAGCACGAAAATTTATAATTTTTCTGTTATGAACTCTTGTTTTGGGCAGTGGTTGTTTCCATAGGAGGAATA


Gene Sequence:
>Vu_18467(-)
ATGTTTGTTCTAGCAATCACAAGAGTGATCTTCTACAAGAAGCATAACCAAGCAAAAGGAAAAGCAAAGGAGGCTAAAATTAATAAGAGAAAAGAAGTCTCAAGTGTGAAAGCCAGTGCTTTATCATCAAGAATCTTCACTGACAGAGAGATAAGAAAGGCAACGAACGATTTCTCCCGAGAAAATCTGATTGGAACTGGTGGATTCGGTGAAGTGTTCAAGGGGACATTCGATGATGGAACCGTGTTTTCCATCAAGCGTGCGAAGCTTGGAAGCACCAAAGGCATTGATCAGATGCAAAACGAGGTTCGAATTCTGTGCGAAGTAAACCGCAAAAGCTTGGTGAAACTCCTTGGTTGTTGCTTGGAACTTGAACACCCTTTGCTGATATACGAGTACATTTCAAATGGGACCCTTTTTTATTACCTTCATCGCCATTCTTGTGGCACAAGGGAACCCCTGAAATTGCACCAAAGACTCAAAATTGCACACCAAACAGCCGAAGGGCTTTCATATCAACATCAAAGTAAATTAGAACACAAAGAGAAATACAAATAAGGGTGGACCTTATTTGCAGAAGTTGTGACCACAAGGTGCATCACCTTGCGGCATATTCTGACGCGCCTATGCTCGCAAGAGCCTCTACCACCAAAGCCAACGCGCCTCCGTGCAACACCTTGAAGGACTTCACCATGTGCAAAATGAAACCATAAAGTTCCCATCTTTACTAAAGACAAAAAAAAAACCAAAACAAAGAGTAGCCAAAATTAAACCATAACAAAGAGAAAGCTTCTAGAATGTCGGGGAAGGAATGCGGATCTGGGTCGCTTGGTGGAGCAGTTACGGTAGCGGAGCATTTCACCCAGACAAGGTCGTTGCTGGTGTCAACCAGCAGGAGGAGGCGTCACGGCGGAGACGGGGAGGCAAGCGAAGAGCAGGCCCTCGAGGGCAACGAAGATGGAAGGGTTTTCGAGCAGGAGCCACTTGAACTAGAGAGAGGACCAGACGCCGATGAGAAAGGTGGTGTGGTCGCAAAGGAAAGAGGCGATGGCAGCCACGACGATGAAGGAGTTGAAGGTGGCGAGGAGGGAGGAGGAGGCAAAGAGGAAGAAGGCGGGCTCGGCGAAGATAAGGGAGAACCACACGACAAAGAAGGCGGCGGGCTTGAGGCTGAGGGCGTCGAGGATGGTGACAACGGGGTGCGACCGAGGTCGAGGACGAATAAGGCAGATAGAATTAAGGCGATGGCGATCCGGTAGTTGTGGGCGAATGGTGAGGGGGTTTTGAGGGATCTGGAGGAGGTGGAGGAAGCGGAGGTGGAGGAGACGCCATTGTCGTGGACGTGACGCAACGACAAAGGGTGGGAGTCGTTACGTTTTTGGGGAGGAGGAGAAGAAGGGGGCGTTGTTGGATGTGGAGAGGGTTATGTGAGGGTGAAATGCGAAGGTGGAGGAGAAGAAGCGGAGGTGGAGGAGAGGGTTATATGAGGGTGAAATGCGCGAGGACAGTGTTATGGAAAGATAGGGTATATTGCCTCGGGTCCTAG