Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18441 LG4 55669353 55670619 GATA transcription factor 2 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 55669519 stop_gained p.Leu203*
G/T,C 55670140 downstream_gene_variant
C/T 55670156 downstream_gene_variant
C/T 55670264 downstream_gene_variant
C/T 55670299 downstream_gene_variant
G/T 55670354 downstream_gene_variant
T/G 55670358 downstream_gene_variant
G/T 55670399 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18441.1
MDMDVCRNVSVSSECQQELPTLDDLFSHQNMEEDFGMEWLSVFVEDCFSSKPSCLLAPPGVETTSPSTKPSSTMQRPQQSYCPLQNFSVPGKARSKRKRLSAPRTKHTLSTWSNNFSTQVLSSDPPLLKQAYWLADSELIVPKKKDEQEVKVDIVVRKEKLGEYCDEGEVNNSSNNNNGQHPIPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKRVMEMRMSVLSTQK*


CDS Sequence:
>Vu_18441.1
ATGGACATGGATGTTTGCAGAAATGTATCAGTTTCTAGTGAGTGTCAGCAAGAGCTTCCCACCCTTGATGACCTTTTCTCACATCAGAACATGGAAGAGGATTTTGGCATGGAATGGTTGTCTGTGTTTGTGGAAGACTGTTTTTCCAGTAAGCCAAGTTGCCTCTTGGCACCCCCTGGTGTTGAAACCACGAGCCCTAGCACCAAGCCTTCAAGCACAATGCAAAGACCCCAACAAAGTTACTGTCCTCTGCAGAATTTTTCTGTGCCAGGGAAAGCCAGGAGCAAGAGGAAGAGGCTATCAGCACCAAGGACAAAACACACTCTAAGCACTTGGTCAAATAATTTCAGTACTCAAGTGTTGAGTTCTGACCCTCCTCTCTTGAAACAAGCCTATTGGTTGGCTGATAGTGAACTCATTGTCCCAAAGAAGAAGGATGAGCAAGAAGTGAAAGTGGATATTGTGGTTAGGAAGGAGAAACTGGGGGAGTATTGTGATGAGGGTGAAGTGAACAATAGTAGTAATAATAATAATGGGCAGCACCCAATTCCAAGAAGGTGCACACATTGTCTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTGGGTCCAAAGACACTATGCAATGCATGTGGTGTGAGGTACAAGTCTGGAAGGTTGTTGCCCGAATATAGGCCAGCCAAGAGCCCTACTTTTGTTAGCTATTTGCATTCAAATTCACACAAGAGAGTCATGGAGATGAGAATGAGTGTTCTATCTACTCAGAAGTAG


Promoter Sequence:
>Vu_18441::LG4:55670619-55672619(-)
TTCAGAAATTTGTCATCACCAGTCTAAAGCCTCTCCCCTTAATGACAAGGAAAAGACCTGACACCATAGCATGTCATTCAACGAGTACACTACCATCGCATCTACAAAAGAGCGCAGATGTTTCTCGGGGTCAGATGTCCCATTGTATCTATCCATTGATGGTAACATCTTAATCTCCGGCATAATCGCCCTCATTACCGCTGTAGTAAAAGGATGGAGTCCCTCTGCACGGTCAAGGCGCTCAATGAGTGGTAAATGACTCCCTGGGTTCACTTTTTTTGCTCGGCGGCCCACATTCTGAGAATTCCCCCTGACATCGTTTGCCTCTGGCCTTCCACCCGTGTCTTGGACGGTATGGCTACTCTCTCCTCTATCCTCCTCACCCATACCCCTTGCATCGTTATTTACCGACTGTAGGACCGTACGTCCTCCTGGTCCTCTACTCCTCTCAGCTCTCAAAGTCGCTACCTCATCTCTTAGCTCCTGCATTTGTCTTTGCATCTCCTGAAGTACCTGTAGTTGAAGTTGCTCTGCCATTGTGGTTTCTGTAGGTATTTCCTCTACTCTCCTTGGCCCCACGGTGGTCGCCAAATGTTTATGTTTAAAGCGGGTCTGAGGTCTCTGCTCCACTTGCTTGCTCTCTTCCTGTGTAAAATGATTCAGATCTCCTTCCCCAATCGGTTCAACGGAGTGAATTGCAAGGAAACACTCTGACGCTCAAGTTATTGGGGTGTCTTCCAAGGTCTCCTATCAAATCAGAAAATCCAATGTACCTGGTCATTAGTGTTGTATTTATAGGCTTTGTAATCATCCAGCTCATTGGACGTCATTTAATGCCCTTTAATGTAATAAATCTTGTGCCTAATCATTTGCTAACGTCTTTATATCCGGCATAATGTGCCTGATATTACCCATTAATTAGCTATAAATGTCTTTCGCACTAGGGGTTACTTACCTTTAATACACATTAATGCCATTAACTGCCTTCCAATCGGTTATTCACTGCTGCGTTGGTCACCTCCGGTGGATCGCCGTCAACGCCCATTACCGGTCGTCCACCTTATATAGTACATGTACAAAAATGAAAGTATGATGCTAAGATACGCGAAAAGCATGGATAACAAAATTCACAAAAATAATATAATGATAATAATTAAGTGAGAAAAATTTCAATTAAACTTTAGTTTTTCCTTTTATAAATTTATATTAGATTCGACATTTTTAAGTTGGTTTTTTAGAATCTATCTATGATTGAATCATACCATTAAAGAAAAACTTGAATAAGAATATGAAAAATTATACCAAATGTATGTTAAGAAGATACGAAAGATACTTCCTACATACCTATTAAAAGAAAATCTAAACTAATATCATAAGGAAGGAAAGAAACCAAGTTATACTGTTTAAAATATATATTTATCAATAATAATTATATGTTTGTAGATGGTTCAACACATGCAAGTGAAGAAATGTGTCTCTTGATACTTGTGAGTGAACAGAGGCTGTATCCACAGAAAGACAACCATGCAAGCAAGAGTTCTGCCAATCGATTCTACCCTTTTACTTTTAACCAAAAATAAAGAGAAAGTTTTGGACAAAGGTGTTGTAAATTATTTCACTACCATTTTAAACAATTACTTTACTCTGTGTCATTATTTTGATGACAAAAGGAAGAAGACACGGTGGAATAACATAAGGTAATAAAGGGTTCATAAAGATAATTGATGTTATGAGGTAAACGTTGCTAATGAAAAACGATAGATGTTGATTGGTGAGTGTGTGCATGAGACAGGGATGTTAACTCTCTCGCAGATTGAACTTTCAAAATTTGATCTGTTTTTCTTTCTTTAGCCTTTATCTGCCGACAAAAACTCTGAGGACCATAAAGAGAGAGTGTTGAGTAGTGTGACATGTAACACCATTTTCAAACACTTCACTTTGTTTCTCTCTTTTTTCTTCTTCTTCTTCTTGCTAATCTTCTCAGCTTCACTCTCTTGCTC


Gene Sequence:
>Vu_18441(-)
ATGGACATGGATGTTTGCAGAAATGTATCAGTTTCTAGTGAGTGTCAGCAAGAGCTTCCCACCCTTGATGACCTTTTCTCACATCAGAACATGGTTAGTGTGTTTGGCCTATTCATTCCACCTTTCTATTTTGCTGCTTTTGGCACTTGTTTGATAAAGTTTTCTTGCCTTGCTTCCTTTTTCCTAGTTTTAACACATGGATTTTCCTTCTAGACCACTCCCCTTTTGATTTTAGTGCTGAGGGAGAAATTCTTTTGTGTGAATACAGTGTTTTAAGGTTAATCTGTTGACTTGGTTCATTCCTTTTAACTTTGAGTCTTGTATGAGGAAACTGGTTTGGGGGTGGTTTATCAGAGCAAGTTTTTGTGGCAATTTTGCGCTGAAAGGGTGACAGAACTCTTCTTCTAGAACCACAACTTCACTTTTATGCATATATAGAGACTAAAATTGATGACTTTTCCATGGACTGAAGAAACAAACTAATCAAGTTTCAATATTTGTTGGTGTGTATGTATGTGCTTGATGCTGTGTTATGTGATTGTACCAACTAAACTGATCTGTTTTCTGGAACCTAAAATGTGAGCAGGAAGAGGATTTTGGCATGGAATGGTTGTCTGTGTTTGTGGAAGACTGTTTTTCCAGTAAGCCAAGTTGCCTCTTGGCACCCCCTGGTGTTGAAACCACGAGCCCTAGCACCAAGCCTTCAAGCACAATGCAAAGACCCCAACAAAGTTACTGTCCTCTGCAGAATTTTTCTGTGCCAGGGAAAGCCAGGAGCAAGAGGAAGAGGCTATCAGCACCAAGGACAAAACACACTCTAAGCACTTGGTCAAATAATTTCAGTACTCAAGTGTTGAGTTCTGACCCTCCTCTCTTGAAACAAGCCTATTGGTTGGCTGATAGTGAACTCATTGTCCCAAAGAAGAAGGATGAGCAAGAAGTGAAAGTGGATATTGTGGTTAGGAAGGAGAAACTGGGGGAGTATTGTGATGAGGGTGAAGTGAACAATAGTAGTAATAATAATAATGGGCAGCACCCAATTCCAAGAAGGTGCACACATTGTCTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTGGGTCCAAAGACACTATGCAATGCATGTGGTGTGAGGTACAAGTCTGGAAGGTTGTTGCCCGAATATAGGCCAGCCAAGAGCCCTACTTTTGTTAGCTATTTGCATTCAAATTCACACAAGAGAGTCATGGAGATGAGAATGAGTGTTCTATCTACTCAGAAGTAG