Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18382 LG4 53496073 53499613 PREDICTED: GATA transcription factor 8-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 53496392 3_prime_UTR_variant
G/T 53496393 3_prime_UTR_variant
T/C 53496614 3_prime_UTR_variant
A/G 53496634 3_prime_UTR_variant
T/A 53496698 synonymous_variant p.Ser322Ser
A/C 53496713 synonymous_variant p.Ala317Ala
T/A 53497431 splice_acceptor_variant&intron_variant
G/T 53497432 splice_region_variant&intron_variant
A/T 53497683 intron_variant
C/A 53497713 intron_variant
G/A 53497726 intron_variant
C/G 53497842 intron_variant
G/T 53497908 intron_variant
C/G 53497957 intron_variant
G/C 53497960 intron_variant
G/A 53497988 intron_variant
C/T 53498083 intron_variant
A/T 53498612 intron_variant
G/A 53498631 intron_variant
A/T 53498905 intron_variant
A/G 53498913 intron_variant
C/T 53499068 intron_variant
T/A 53499292 missense_variant p.Thr67Ser
T/C 53499295 missense_variant p.Asn66Asp
C/T 53499323 synonymous_variant p.Leu56Leu
C/T 53499331 missense_variant p.Asp54Asn
A/G 53499383 synonymous_variant p.Thr36Thr
A/T 53499413 synonymous_variant p.Ala26Ala
C/T 53499510 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18382.1
MIENFIDDIDCGSFFDHIDDLLEFPAEETSAVTDTTVVTPVAPPPTNFWSTESDSLHATNTVFSGNTVPDLSTELSVPFEDIEQLEWLSNFVEDSFSGGSLTMQQEQPQCSNKEERTHAQFQTASPVSVLESSTFYSGMKAASRNAEIYIPVPCGRARSKRPRPAAFNPYPVMQLISPASSTGENTQPITTTSKTSSDSENFAESTIKPPKQASGEHKKKKKIKVTFSGGEDHNAAASQAVRKCVHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCAAVHSNSHKKVLEMRNKTGPKSGFAADSASSPELIPNTNSSLSLEYM*


CDS Sequence:
>Vu_18382.1
ATGATCGAAAACTTCATTGACGACATTGATTGCGGCAGCTTCTTCGACCACATAGATGACCTCCTCGAATTCCCTGCTGAAGAAACATCAGCTGTCACTGACACTACTGTTGTTACACCGGTTGCTCCTCCTCCGACAAACTTCTGGTCCACAGAATCTGACTCGCTGCATGCCACCAATACGGTGTTTTCCGGCAATACTGTGCCGGACCTCTCGACAGAACTCTCTGTTCCGTTTGAAGACATTGAACAATTGGAATGGCTGTCAAATTTTGTTGAGGACTCTTTCTCTGGTGGGAGTCTCACCATGCAGCAAGAGCAGCCACAATGCAGCAACAAGGAGGAGAGAACTCATGCTCAATTCCAGACAGCAAGTCCAGTCTCTGTCCTTGAAAGCAGCACTTTTTACTCTGGAATGAAGGCTGCCTCTCGTAACGCAGAGATTTACATCCCTGTACCATGTGGACGTGCACGCAGCAAGCGTCCACGTCCTGCAGCCTTCAATCCCTATCCAGTCATGCAGCTCATCTCGCCAGCGTCTTCCACCGGCGAGAACACACAGCCCATCACTACCACCTCCAAAACCTCCTCAGACTCTGAGAATTTTGCTGAGTCCACCATCAAGCCACCAAAACAGGCTTCTGGTGAGCACAAGAAGAAAAAGAAGATCAAAGTGACTTTCTCAGGTGGTGAAGACCACAATGCTGCAGCATCACAGGCAGTGAGAAAATGTGTCCACTGTGAGATAACCAAGACACCACAGTGGAGGGCAGGGCCAATGGGGCCAAAAACACTCTGCAATGCTTGTGGCGTGCGCTACAAGTCAGGGCGCCTCTTCCCCGAATACCGGCCGGCTGCCAGTCCGACGTTCTGTGCAGCTGTGCACTCCAACTCCCACAAGAAGGTCCTTGAAATGAGAAACAAGACAGGCCCCAAATCTGGTTTTGCAGCTGATTCAGCTTCCTCACCAGAACTTATTCCAAACACTAACAGCAGCCTTTCCCTGGAATACATGTGA


Promoter Sequence:
>Vu_18382::LG4:53499613-53501613(-)
TAACTATAAAATGAAATAATAAAATATTTATAACACAGGATATTTTATACATTTAATGCAACAATTCTTGTGATAAAAAATAATTTTAAATTTTAGAAAGTATTTAAACTTAATTGAAACATTTAATTTTAGTAGTCCTAACCTAAAAGTAATATATTTGATAAATGAATTTGCAACGGCAGAAAAAGGTATTGGCGTTTCTATGAAAAAGGGTGAAAAGTAGGTTTCTGTGCAAAAAAAAGGTGAAAAAGTAAACAGTTATGGTTGTTTTGAGGGTGAAAAGAGTTGAAGCTTGTTTGGGTGGTGTGAATAATATCCGTGAATGTGGTGTGTAGGCATGGGACCCGTGTGCAATCAGAAGAGGAGAGAAACTCAAACACAAACCAAAATCAAAATCAAAAAATAAACATAAAAGAAACTGAGAATACTTCAACATCACGACACTGTCCCATGGTAAAAGACAGCTAGCAACGAACGCGGAGCATCACCTAACGTTGTTTGTTGCCCATCACTTTTTTTTTTTTTTTTTTTCAATTTCTTAGTTCTCACCACTCTTTTAAACCTTCTTCACTCTCCTCTCTCTCTTTTCAAAACCTTTCTCTTTCTTCTCTCTCTCACATTCTAGTCTAGTTTTCTTTGCAATGGAGACGGGTTTCTAATCTTCTTCTTCTTCTCTGGTTTGTCTTTGCTCTTCTCATTTGAATTCATCTTATTTTTGTTGAAAATTGTAATGATCTCTTTTCTATTTCAAATATTTACTTTTTAATGAAATGTAGATTTTGATATCAAACTACACCATCATCTTCAATTATGTACTCGTTTCTGTACTTGCAATAACTTTTCCTTTTTCGATTCTCTAGTTTCAAATATTTTATTTTAATTTTATAATTATCCTTTTTCTTTGTCTTTATTGACAAATCTGGGTGACGAAATTATAGACTATATCATGTTGACACCGTGGAGAGTAAATAAAGAATTTTTTTTTTCATTTTATAATGTGTTTTCTTTTACTGGTTTTTTTGTTTGTCCAGGTTTGGATTTTGAAATTATTCACACATTGTTGATAACTTTATTGTAAAGGTAAGGTTTTGTTCTACTTGTTCTCCTTCAATTTTTATAAAATTGGCTTAAATTTTTCTAAAGGGCTATGAAAATTGAATGTATACATTTCGATAATGTCAAAGAGTGGAACATATTTGGTACCAGCTATTACGCATGCCAAGTGTTTGCTGAAATGACACAATTTTTTATCTCATTTTTGTTTCAAGAGAAAAAAAAAAGAGCATGGTGCATTTGCATTGAAGTAATTTTGAAAGCTTTATTACTAAAACTTACCCAAAGAATAAATAAATTTCTTATCTAAGGTTTTTAATTCTTATGAATTTTGATGAAATTATATTTGATGATATTCAAAATTAAGAAAACCCCCACCATTTTTGTTTTACTTTTTTTTCTGTAATTTCCAAAACTGGAAATCTTTAAAGTTTAAGAAACCAATATGGTATAAATTTTATCCCAGATTTCATTTCTCAAATAACAATAAAACAATTAAAAGTAATACTATATTTAAAAAGGAGTTTTAATATGTATTGTAAGCATAAATTATTTTTCTTAAAGTTTGTTTATAAAATAAAAAGTCACACTTGACAGACTTTTCTTTATAACAGCACCGGCATATAAGAATCCTTACATGAAAAGTAAAATGTCTATATTTCAATAATATATTTATTAAATTTTTTTTATCAATGTTATATATTTATGAAAACTTTATCCATTTCCATTTCAATAATGGTTATATCAAATATATATAATATATATATATATATATATATATATATATATTTTTTTTTTTTTTTTATGTATATGAAAAACACAGAAGTTATATGATAAGTGCTAAGATATGTTCTTTCTCTTTCATGGTGAACATCCTCCATCTTTCAGTAGGTCCCACGACATGGGTACTAACTCCTACTAATAACCTATTTCGAACATTCACACTC


Gene Sequence:
>Vu_18382(-)
ATTCATCCTTCAAACAAACACAACCTTAAAAGCAGATAAAAAACGCTCTGTTCCTTTAATTTCTCTTCATTTTCTACTCTCATTTTTTCTTTTTTCACAGGAAGGAAAAAAAGAGAAAAAAAAATGATCGAAAACTTCATTGACGACATTGATTGCGGCAGCTTCTTCGACCACATAGATGACCTCCTCGAATTCCCTGCTGAAGAAACATCAGCTGTCACTGACACTACTGTTGTTACACCGGTTGCTCCTCCTCCGACAAACTTCTGGTCCACAGAATCTGACTCGCTGCATGCCACCAATACGGTGTTTTCCGGCAATACTGTGCCGGACCTCTCGACAGAACTCTCTGTTCCGGTGAGATTCCAAACTCTTCTGACATCTCATTCGTCCATGTGTGTACTGAAAAAGCGGTCACGTGTTTCGTGAACCAGTTGCGTGTAGTTTCATCAAGGCTCCTGGTTTTGGTGGTGTTTTTATTACATGTCTGTTACCCTGCATAATTGTATGAAAAATTGGTTCTACTAGCTGTGATTCTCTGCATAGTACAGGTTTTTTTGTTCAATTCTTTTTCTCTATTTTCAATACTCCAAACTTAGCCTTAATTTCGATTTTGGGGTTACAGAGTTTCACACGTTTCAGTCAAGGAATCCCTAATTTCTAAACAGTTTCATTTTTCAATATCATTAATTAAAAATACTTTATTTTTTTTTTATTTTAACAACTTTTAATAGAAAAAATTTTACTTGTAAATTTTAACCATTTAGATTGTATTTAAAACAACTTTTAGTAAACTTATTTTGTTTCTTAAATTTTAATACCTTTGGATAAATTATTTGACTGTAATAAATAAAAACCATCACTTCTAAAGTAATTAAATTAATATTTACGTAGTACTTTTTCAAAGTTACATCTCTCGTTCAAACATATTAAATGCAAAGTTAATATATTGAAAAAACGTAAAATACATTTAATACTTATACAAAGGAAATTGGTGTAGTTGGTATAAATTTTGAATTTGAATTATTTAATTTAGAAAAAAAAAATAGATGACATGTAATAGGGTATCTTTTGGTATATTTTTATACGTATTATATAAAGTTAATAAATTTATTATATGAAAATATAATTAGTATTAGGGTGCAAAATATTTTTCCTGTTTGTATTATTATTTTCTTTTCACATACACACATCTAAATAATATTCTATCAAAACTAATAAAAGTTATCTTTCTATTTCTTTTTTTCCTTTGAAAACTTTAATTATTTTTTAGAATATTTAATTTTCACCGACAAATAACTTAATCACATTATTCTCAAATATAATTTTGGATTTGGAAGGTTGCATTGGGGAGTTGAACAAATTTCCAAAATATTCTTAGGAAAGGGTAGTTTGGTCATTTATGGATACTTGATTGTGTCGGTGAGAAACAAGAGCACATCATCCACTTCAATGGTGGGGTTGGGTTGGCTAAATTATTATGAATATCATTATTGACAGTCACGTGACTTAGCATGTGAGGCCATAATGGCTATTTACAAAGGTTGTCACACTCTTCATAGTAGTAGCACACCTCATGCTTCATCCGGAAATCTGAGTTGGTCAAAATCTGTTAACATGTCTAACATGGAATAAATTAATCAAAATTTACTCCATGTTCTCCTCTTTTGTTGACTTTACATTATACTTTTTTTCTTTTCAGTTTCTTATGCAATTATATGAATAGAGAAGTCAGCAATGTCAAAATATTACTTTTAAGATTATTTTATCCGTAGTTTTTTTTAATTAGTGTAAAATCTATGAAAAAATGTATTTAGTGAAAAACAGTATTGAGTTTTTAAAGTTTTTTTAGAATGAAAGAATTAATTAATGATAAATCTCGTAACACGATGATGAATTTGATTATTGAATCATTTCTTATAAATATATTTATTTAATTTTTATTTGTATTTTTTTTATATATGTAATATAATTTTATCATAGATTTAATACTTTCATGATTTTTTTTTGTTTTTTTAATAAAATTTTCATATAATAACTATGAAGACTGATATGAGAAAATTATACCTTCTCTATTTCATCATAATTAGTGGAGTTTAATTTAAATATATTGAGCAATTGTAATTTCTCATTTCTCATTGAGGGAATGATTAAACAAATAGCCTTACATTGTTCTTATTCCAGTTTGAAGACATTGAACAATTGGAATGGCTGTCAAATTTTGTTGAGGACTCTTTCTCTGGTGGGAGTCTCACCATGCAGCAAGAGCAGCCACAATGCAGCAACAAGGAGGAGAGAACTCATGCTCAATTCCAGACAGCAAGTCCAGTCTCTGTCCTTGAAAGCAGCACTTTTTACTCTGGAATGAAGGCTGCCTCTCGTAACGCAGAGATTTACATCCCTGTACCATGTGGACGTGCACGCAGCAAGCGTCCACGTCCTGCAGCCTTCAATCCCTATCCAGTCATGCAGCTCATCTCGCCAGCGTCTTCCACCGGCGAGAACACACAGCCCATCACTACCACCTCCAAAACCTCCTCAGACTCTGAGAATTTTGCTGAGTCCACCATCAAGCCACCAAAACAGGCTTCTGGTGAGCACAAGAAGAAAAAGAAGATCAAAGTGACTTTCTCAGGTGGTGAAGACCACAATGCTGCAGCATCACAGGCAGTGAGAAAATGTGTCCACTGTGAGATAACCAAGACACCACAGTGGAGGGCAGGGCCAATGGGGCCAAAAACACTCTGCAATGCTTGTGGCGTGCGCTACAAGTCAGGGCGCCTCTTCCCCGAATACCGGCCGGCTGCCAGTCCGACGTTCTGTGCAGCTGTGCACTCCAACTCCCACAAGAAGGTCCTTGAAATGAGAAACAAGACAGGCCCCAAATCTGGTTTTGCAGCTGATTCAGCTTCCTCACCAGAACTTATTCCAAACACTAACAGCAGCCTTTCCCTGGAATACATGTGACAGGAATGATCCTAGTAGTTGAAGGTTCTCTGATTCTCTTTCAATTCCTCTCTTGAGTCGTCGTCGTCGTCGTCATCATGTCTTATACAAGGCTTTGAATTGCATTCTGCAAACTGCAGTAGTAAGGTTTTTTTATAGGTATCTGCAACTGCACTGTGGTTGCTGTTGTTACTGCATTAGCCATATTTGTCCACAATTTTGATGCATGACAACCACAAGTTTAAACCTTAGTCTTGTGATGCTTCTTATTTTTCGTTTATTTTCTGATTGGGTTTTGTACAGGGCTGGAATTGGATGATAGGAGAATAGAATATGCTCATAAGTTAGCTATATTTAGAAGAGGGTTGTAATGAGAACTGAGGAAGAAGTGATATAGAGATGAGAGTCATTAGTGTTAGCCATTTAGGCTAGTAATCGTAGCAGTACTCAGCAGGGTCATAGAACTGGGTGTTATTTTACTTCATTTATTTTTGCTTCCAACCACCTTTCTATGTAGCAATTCTTTTTGCAGTTCATTTGTAGTCAAACTTATGAGTTGAGTCAGAAAGGAACTTTTGGAATTTGCCTTCTTTTT