Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18117 LG4 46911958 46913960 PREDICTED: ethylene-responsive transcription factor ERF113-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 46911958 splice_region_variant
G/A 46911984 3_prime_UTR_variant
A/C 46911997 3_prime_UTR_variant
T/C 46912055 missense_variant p.Lys275Glu
G/T 46912175 missense_variant p.Pro235Thr
G/C 46912184 missense_variant p.Gln232Glu
A/G 46912239 synonymous_variant p.Val213Val
C/G 46912333 missense_variant p.Ser182Thr
T/C 46912335 synonymous_variant p.Gln181Gln
T/C 46912409 missense_variant p.Thr157Ala
G/A 46912525 missense_variant p.Thr118Ile
A/G 46912632 synonymous_variant p.Leu82Leu
A/T 46912654 intron_variant
T/C 46912663 intron_variant
T/C 46912676 intron_variant
C/T 46912686 intron_variant
C/A 46912711 intron_variant
A/G 46912826 intron_variant
A/T 46913017 intron_variant
C/T 46913041 intron_variant
A/G 46913295 intron_variant
A/G 46913626 synonymous_variant p.Asp10Asp
C/G 46913677 5_prime_UTR_variant
T/C 46913701 5_prime_UTR_variant
C/T 46913743 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18117.1
MQGKSSPPLDEVKKEAFNFPIPLTPSQNPKEQASSSTFSNFLMTTNHQNTTFFPTPHGQITTSKFINTQDPSQATNQGNADLRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAMAYDVAALKFKGNKAKLNFPERVAVPPPSPETTTTISSASAQPSSLTSPPPHVGGDHQSLETSEEAEGFPSLMEYARLLKCRDDDDFQRVALGLYQHHPNEDVIYGSSQPPPAPFFLSSSSSSTFASSTSQGDYGSSGFFSQGGSGFDEGNKRGS*


CDS Sequence:
>Vu_18117.1
ATGCAAGGGAAGAGTTCTCCCCCTCTTGATGAGGTGAAAAAAGAAGCTTTCAACTTTCCTATTCCTCTCACACCATCTCAAAATCCAAAAGAACAAGCTTCATCATCAACCTTTTCAAACTTTCTTATGACTACCAACCATCAAAACACCACCTTCTTCCCCACTCCACATGGTCAAATAACCACTTCTAAATTTATCAATACCCAAGATCCATCTCAAGCTACAAATCAAGGTAATGCTGATCTTAGGAAAAGGCACTATAGAGGAGTTAGGCAAAGACCTTGGGGAAAATGGGCAGCTGAGATAAGAGACCCTAAGAAAGCAGCGAGAGTGTGGCTTGGCACCTTTGACACAGCAGAAGCTGCAGCAATGGCCTATGATGTTGCTGCATTGAAGTTCAAAGGAAACAAAGCCAAGCTCAATTTTCCTGAGCGTGTTGCTGTGCCACCACCATCACCGGAAACCACCACCACCATTTCTTCAGCTTCTGCACAACCCTCTTCCCTCACGTCACCACCACCACATGTTGGTGGCGATCATCAAAGTCTAGAAACATCAGAAGAAGCAGAAGGGTTTCCAAGTCTGATGGAGTATGCACGGTTGCTGAAATGTAGGGATGATGATGATTTCCAACGTGTTGCATTGGGGCTTTACCAGCACCATCCCAATGAGGATGTTATCTACGGTTCATCTCAGCCACCACCTGCGCCATTTTTTCTGTCTTCTTCATCTTCTTCTACATTTGCATCTTCAACTTCTCAGGGTGATTATGGTTCTTCTGGATTCTTTAGTCAAGGAGGGAGTGGTTTTGATGAAGGGAACAAGAGAGGATCATAG


Promoter Sequence:
>Vu_18117::LG4:46913960-46915960(-)
TGGTGTTGAGGAGAGTGGTCTCGATTCGCATGTGAACCTCTCCAAACGGATGGGTTGTGCCTTGTTTAAGAATTTCAGGGGTCCTCTTCAAGAGGTTTAAAGCGAGTTCGAAGAGATGACCTCTCATTCTTGAGGCAAATCAACCTTTGCTAAAGTTCCTAGAGCTCGTGTAGGTTAACTTGTTATTGTGTGTGCTGGGCTTCAATCTCAGTATCATATTCCTTACGCTATTCTTTATGGTGTTGTATGTGTATTTGCACTTGCTAGTAAAGGGTTGCCACCTTGTTGACTTCCATCTCGTGGGAGATTTGAGCGAACCTTCGAGTGGTGACCATAGGGAGGTGAGGCCCTGGAAACGTTTTACGAGGGCCATACAGTGATGCCAAATAATCTTACTAGGATCTTGAGCATATGCATTTATGGACAGATATCAAGATTCTAGCGGTGGCTTGAAAGCTCTTATTTGTCAGAATTGCATCTCTTTCTATTTAGAGTGGGAGATCCACCCGCAAAAGACTATCTGACGCTTAAGTTATTAAGAAAATTTAGATCTTTATGAATATAATGAGTATGAATAATTATTAAGTGAGTATTAAAAAAAGATACTAGTTGTATTTATAAGATTGACATGCATCATAGACCTATAATAACATAATAATAATCATAATATCAAATTTTCGAGATTAATTATAGTGTGTCGATATTAGTTGAATGCTTTGAACTATTCCAAAATAAAAAAAGCTTAAGCAACTTTTGAACCATGTTCTTTAGTATATATTAGCCGGAGAGTAACATTGATTTTTTTTTCTAGTAACATAATAATTTATCTCATCAATTCAAATATGTTCAACTTAAAAAGTTTTTACTTTTCTCATCAACGACATATTAATTCATTAATTTTGTAGCTGATCTAACATCCTAAAAATAACCATAGAGAAGTATAATGTTAACATTTAGTCGCCATAAATAGAATGGACTAACCAAGGATTAGCCCCAAAAACTCAAACCTGAAGATTACCTTAATGATATTAATCATTTTTCTATTCAAACCCTTAACTAATTAATACGTTGTATTCTTTGATGCGTTAATTACTTGATTAAATAGTGAAATTTAAAACAATTAATGGACAAATAAAAACTAAAGATATTCCATTTTTAATTAATACTCTTGCTCTTTTTTTCTCTCTAGCACGTGTTGTTTTGGATTATTGACCAGTCAATCGATCTACTATATTATGTTACATTTCAGTAATAAAATGAAATAACATTGTTAAATAGTTTTATATTTATTTTATAATTGTATAGATATTTATATATCACGTGACTCTAATTCAAAAAATACAATTTTATTTTATTTTATTATATACCCTAATGAAATTAATGGGTTTTAATATCTATTTGTCATAATTAATATTAAAATTTTACCTCAATATCAAGTATAATGAGATACTTATATATATATATATATATATATATATATATATATATATATATTATATATATATATATATATATCACTTTTAAAATGTTATTTCATTAATTAAATTCATTTCAAATATTGAACTAAAACATTACTAAATGTTTAAAATTTATGTTCTTATATTTCTCTATGTAGAAATATTCGTATGAAATTCTAATGATTTTACCATATTCTAATTGATGCAAACAAGGGACAAACAAAAACTATTGATGCCAAAAAGCAGAAGTATCCAGAAAACAATAAATGATCCAAATTCAATGTATATACCCCACACCTCTTTCTGCGCTCTAAATAAAAATAATTAAATATACAATATACTACAATATTCCTAACAAAATAGAATACCAAGAAAGTTACTCACACCACAAATATCCTAACTGGGTTGTCCCCTATTAAAATATATTACATCTTTGTGCCCAATTATAAACTTGACATTAAAGTATTCATTTCGTTTTCATTTTTTGGGGCACCCCAAAATTTTCAAGGGACAAACATGACTTTATTTTTTCAATGGGAAAAC


Gene Sequence:
>Vu_18117(-)
CTACAAGCAAGCCCATGTTATCTTGTTCTTTTCCTTCATCTTGTTCTTTTTTTTCTTTTTTAGCAAATCTCTTTCTTATTTAAAAGATGAAGCAAGCAAACAGAATCCTCTCTTTTGATCTTGGTTTCATTCCTCATCAAATCACTTCTCCTCCCTTTATAGAAATCTTAGATCTGCTTTTAACACAAGGTGGTGGTGGAATCTCTTCACCAACTTTGGATTAGAGACATATAAATAGAAAGAGTTGAAGAAGAAGAACAAGAAGAAGAAGAAGAAATTACAAGTTACTTGGCAAGGTGGATCCAATGCAAGGGAAGAGTTCTCCCCCTCTTGATGAGGTGAAAAAAGAAGCTTTCAACTTTCCTATTCCTCTCACACCATCTCAAAATCCAAAAGAACAAGCTTCATCATCAACCTTTTCAAACTTTCTTATGACTACCAACCATCAAAACACCACCTTCTTCCCCACTCCACATGGTCAAATAACCACTTCTAAATTTATCAATACCCAAGATCCATCTCAAGCTACAAATCAAGGTAAACTGATTATTTCAAGCTTGATTGATTATCATCACTATCATCTTCATTTTATTACCATCAATGAATCTAGATCCCTATCCCATGATTTTTTTCTTTCATTTTGGAAATTCTAATATATATCTTCTTGTGTGAGATTATTAGATAAAGGTTACCCCACTGTTTTATCCTCTAACATATTCAAAGATATTTTCACCGAATGCAACTTACGTGATACTTCTTCTCTCTCAAAAGTAAAGGAAAAAATAAAAAATAAAAAACACCATAAAGTTAGTTTCTGCCATATTTTGTTCTTTTCCTCTCCAAAAAACAAAAAACAAAACTTCACCTGTTACTGCATCTGCACAACCTTCTCGAATCCTCGATCTGCTAATAACAAAGAGAGTTGAATTTGACACGTTTCCATTTTCTACCCTCTGTATTATCATTATTGACTCCCATGTTCCATCTGTGTTTTTTCTAGTCTACCTTTGACCACACTAATAAATGTTCTGCATTCAGTTTCACATTGCATTTTTCCACTTTCCTTGTATCTTTGCTCGCTCTAGTCTTCAAAATGGACCAAACTTTAACTCAGATATGCTTGTTTTAATGAAATGAAAATCAAAGTTTTGCCGTGTAATTCATGTATTAAATGTTGAATGCAAATTTTTCCGTAAGCAAAACTGCAACTCTGATACAAGAACACTGAGTCTTATTTCTTTTTCTTTGCGCTTGCAAGTAAACTAGAGTAGAATGTTGCAGACTAACTGGAAGAATCAATGTTTGATATTTGAAGGTAATGCTGATCTTAGGAAAAGGCACTATAGAGGAGTTAGGCAAAGACCTTGGGGAAAATGGGCAGCTGAGATAAGAGACCCTAAGAAAGCAGCGAGAGTGTGGCTTGGCACCTTTGACACAGCAGAAGCTGCAGCAATGGCCTATGATGTTGCTGCATTGAAGTTCAAAGGAAACAAAGCCAAGCTCAATTTTCCTGAGCGTGTTGCTGTGCCACCACCATCACCGGAAACCACCACCACCATTTCTTCAGCTTCTGCACAACCCTCTTCCCTCACGTCACCACCACCACATGTTGGTGGCGATCATCAAAGTCTAGAAACATCAGAAGAAGCAGAAGGGTTTCCAAGTCTGATGGAGTATGCACGGTTGCTGAAATGTAGGGATGATGATGATTTCCAACGTGTTGCATTGGGGCTTTACCAGCACCATCCCAATGAGGATGTTATCTACGGTTCATCTCAGCCACCACCTGCGCCATTTTTTCTGTCTTCTTCATCTTCTTCTACATTTGCATCTTCAACTTCTCAGGGTGATTATGGTTCTTCTGGATTCTTTAGTCAAGGAGGGAGTGGTTTTGATGAAGGGAACAAGAGAGGATCATAGTGTTTCTTTTCTCTGAATTCTGAACACTGCATGAATGTGGGAATTGGAGGGTAGTGCCACAATTAAGGAAGTTCAAATCACAC