Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18071 LG4 45995395 45996708 PREDICTED: transcription factor CYCLOIDEA-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 45995655 missense_variant p.Pro352Thr
G/A 45995996 missense_variant p.Ala238Val
G/T 45996348 synonymous_variant p.Arg121Arg
C/G 45996455 missense_variant p.Gly85Ala
A/T 45996463 missense_variant p.Ser82Arg
A/T 45996516 missense_variant p.Ser65Thr
G/A 45996583 synonymous_variant p.Ser42Ser
G/T 45996673 missense_variant p.Phe12Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18071.1
MFPYSSTPYPSFPSSSSSFHPFPFLNLENASAGNTLLHDPLSVPYLPTHHNPPNIQEALSNLPVSDHNCGGGGSAMTKPDPSGGGAAAAAPHYGLSCFLTKKPVKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKNSTNSEEGAKSFSSSSECDDDCEVVSEIKQKQQLITGDAAAPNNLQQGLDSSDNKSPTFLAARERMKLKRAQKEPAKMKESREKARARARERTSNKIMCNVNSNTGRVQQDLRKKCPAIENSHSHHLVGSETPRDDFNVIEESIVIKRKLKPSLMSSSHHHHQNLMIPKEPPCFNNNNNIEYHHPFSNLSPNWDANGSTGRSNFCAIASMNLSTGLQIFGKSWEECTNPRLH*


CDS Sequence:
>Vu_18071.1
ATGTTCCCTTACAGTTCCACCCCCTACCCTTCCTTCCCTTCATCATCTTCTTCCTTCCATCCTTTTCCTTTCCTCAACCTTGAGAATGCTTCTGCAGGAAACACCCTTCTTCACGATCCACTTTCCGTGCCTTACTTACCAACTCATCACAACCCTCCAAACATCCAAGAGGCACTGAGCAATTTGCCAGTCTCAGATCATAACTGTGGTGGTGGAGGTTCTGCAATGACCAAACCTGACCCAAGTGGTGGTGGTGCTGCTGCTGCTGCTCCTCACTATGGCCTCTCTTGTTTCCTCACAAAGAAGCCAGTTAAGAAAGACAGGCACAGCAAGATTTACACCTCTCAGGGGTTGAGGGACCGGAGGGTGAGGTTATCCATTGAGATTGCTCGCAAGTTCTTTGATCTTCAAGACATGCTAGGGTTTGACAAAGCCAGCAACACCCTTGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTGGCAAGGAGCAAGAACAGCACCAACAGTGAAGAAGGAGCCAAGAGCTTCTCTTCTTCATCTGAGTGTGATGATGACTGTGAAGTGGTTTCGGAGATCAAGCAGAAGCAACAACTCATCACCGGTGATGCTGCTGCTCCAAACAACCTACAACAAGGGTTAGATTCAAGCGATAACAAGTCACCGACATTTCTGGCTGCAAGGGAGAGGATGAAGTTGAAAAGGGCACAGAAGGAACCTGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATCATGTGCAATGTTAATTCCAACACAGGGAGGGTGCAACAAGACCTGAGGAAAAAGTGCCCTGCAATTGAAAATAGCCACTCTCATCACCTTGTTGGAAGTGAAACACCTAGAGATGATTTCAACGTTATTGAGGAATCAATTGTGATAAAGAGAAAGTTGAAGCCATCATTGATGTCCTCTTCTCATCACCATCACCAAAACCTTATGATCCCTAAGGAACCACCATGTTTCAACAACAACAACAACATTGAGTACCACCACCCTTTCTCCAATTTATCTCCGAATTGGGATGCTAATGGATCCACTGGCCGCTCCAACTTCTGTGCCATAGCTAGCATGAATCTATCCACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTTTACACTAG


Promoter Sequence:
>Vu_18071::LG4:45996708-45998708(-)
TTTTAGGTTTAGAAATATATTATATATCACAACACCAATCCTTCAAAATATAAAAAATTAAATAAAATTATAACATTAGATCTAAGATAGGTTATTATTTTTTCATTAACAAGAAAATATACATACAAATATAGAAGTATTTAGGATATTTCAACTCATATAAGAAGTTAGATTAGTTAATTAGAAACCCTAATGAAGAGCCACCAAGAAGATAATTTCAAAAGCTTTCTTAAGTATGTTTCTGAGACACATTTGACTGTTAAGTTTACATTAAAAAAAAAAGGCATAGCAATTAAAGTGAAAAGTAAAACCCTAAGAAAATGGTGTGATGAAAATTAAGAAGAGGGTTATGAGAAGGAAGTACTGAAACTGAGATCCAAGTGCAGATTCTGGAACCGTACCATGCATGTATATAATATAGTTTCTTTTCCCAGGTTGTGAGGTACAAAAGAAATCCAAAGAGCTTAGGTTATGAAAGAGGACCAAGAAGCCATCCATGACTCTGTGTAAACACCAACTACAGGTTACTGAATATACAAACTGATAAGAGGGCAGGGATGACCCCCACTCTCAAACTGCAAACCATAGCAATGCTGTCAGAGATTGGATGAGTTTTCCGGGCTGAAAATGACAGTAGGAGGTACGGTTCTCTCCAATGAACCCTAATTTTTGTAATTACCATTTTGTCTTTTTTGCTCAGTCGGTAGCTAGTACTTTTTTCTTCTCTTTTTTAATTCAGAATCAACCCCTTTTCCCCACTCTTTCAATTAAGATTATTCACTGTTTCAATAGTAAACAAAAATATCTGCTTTTTTCTCGTTAACACCCTCCATTCATCACAATTTCAGAACATTGTAATGATTATAAATATTCATATTTTCAATCATTCGTAAATAAAACAATTTCTTTAAATTTTATATTGTGACCATGTCTGAAAAGTCTGGATTTTTCAAAAATGATCATGGGGTGTGGAATGTTTTGATTAATATTCAGAATGGAAAGTGCATGTTTTTATATAAGGAAAGAGAAATTGATCTCTTGATTTTCTTGGTGATTGACTGATTAACTGGTTACCATTTACTATCTTACCTTCCTCGTTGAGGAGTATCAAAACTTATTTGTACAGAAGAAACAGTGAACCGTGTTTGCACCGTTTCACTTCCACCCACCTTTTAGAACCCTTGGGTTAAAAAGTTGAAGCCTCGTCATAGGAAAGAAAAAATCCCAATTTTCCCCAGTTAATTTCTACAGCAATGTGTGATAAATTTTTCACCGGAAAAAATCCCATATTGGTTGCTCAAAAATTAAGCATTAACACATCAGATATTACGTAGACCTACTTTTAATCTTCAAATTCTGTGAGGGCTAAGTAGAACCCTAACCCTAAGGACACCAGAGACAACAACAGAGAAAAAAAAAAACACACATATTAACGGGTTCAAAAGTTAGACGATTTGACCCTGCTCTGCTTACGTTGCTTCCACATAATGAGGCAAAAAAACCCATAAATTATGTGTCTTGTACTCCGTTTACTTACACTATTACTGTCTCATTCTCTCTCTTTCTCACTCTCACTCACACTCACACTCACACATACACACACAACACTCTTTCTCTCTCTTCCTCGCTGCCATAGACTCAGGTCCAGCAGATAATCCAACCACATAACAATAGTCACTATGCAAGCAAAGCAAATCCAAGTTCCATCATTGGCCTAATTGAAAATCACTTCTTAAGCACTCTTTTTCTCTTCTAGGATGGGTTATAGTGTTAGCATAAGACATAACTAGTCTCTATCTCTATCTCTATCCCTTACCTCAACCCTTTATATTAAAGGGTGTGTTGGGGCATCACTTTGGACCATTAAGTTGGGAGCTGTGGGTTAAAACCAGTTCATTGTTCGGAGGAAGATAGACATACACTTCTTCAAGAGCTAGGGTTTTTGTCCCCTCTCTCAAACTCATTAATTGAAAAGAGAGAAAAAAGAAAAAAATCTTCAA


Gene Sequence:
>Vu_18071(-)
ATGTTCCCTTACAGTTCCACCCCCTACCCTTCCTTCCCTTCATCATCTTCTTCCTTCCATCCTTTTCCTTTCCTCAACCTTGAGAATGCTTCTGCAGGAAACACCCTTCTTCACGATCCACTTTCCGTGCCTTACTTACCAACTCATCACAACCCTCCAAACATCCAAGAGGCACTGAGCAATTTGCCAGTCTCAGATCATAACTGTGGTGGTGGAGGTTCTGCAATGACCAAACCTGACCCAAGTGGTGGTGGTGCTGCTGCTGCTGCTCCTCACTATGGCCTCTCTTGTTTCCTCACAAAGAAGCCAGTTAAGAAAGACAGGCACAGCAAGATTTACACCTCTCAGGGGTTGAGGGACCGGAGGGTGAGGTTATCCATTGAGATTGCTCGCAAGTTCTTTGATCTTCAAGACATGCTAGGGTTTGACAAAGCCAGCAACACCCTTGAGTGGCTCTTCAACAAGTCCAAGAGAGCAATTAAGGAGCTGGCAAGGAGCAAGAACAGCACCAACAGTGAAGAAGGAGCCAAGAGCTTCTCTTCTTCATCTGAGTGTGATGATGACTGTGAAGTGGTTTCGGAGATCAAGCAGAAGCAACAACTCATCACCGGTGATGCTGCTGCTCCAAACAACCTACAACAAGGGTTAGATTCAAGCGATAACAAGTCACCGACATTTCTGGCTGCAAGGGAGAGGATGAAGTTGAAAAGGGCACAGAAGGAACCTGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATCATGTGCAATGTTAATTCCAACACAGGGAGGGTGCAACAAGACCTGAGGAAAAAGTGCCCTGCAATTGAAAATAGCCACTCTCATCACCTTGTTGGAAGTGAAACACCTAGAGATGATTTCAACGTTATTGAGGAATCAATTGTGATAAAGAGAAAGTTGAAGCCATCATTGATGTCCTCTTCTCATCACCATCACCAAAACCTTATGATCCCTAAGGAACCACCATGTTTCAACAACAACAACAACATTGAGTACCACCACCCTTTCTCCAATTTATCTCCGAATTGGGATGCTAATGGATCCACTGGCCGCTCCAACTTCTGTGCCATAGCTAGCATGAATCTATCCACAGGTATGTGTGGTTGTTGTGTGTTTCATCAAAATGATACTAGTACCAACTGATAAGATCTTCTAGAAACCTTCTATTTTGATGATATTCATAGTTCTGTAAGTCTTCAATTTTCAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGGAGTGCACCAATCCACGTTTACACTAG