Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17975 LG4 44364408 44365946 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 44364426 missense_variant p.Pro7Ser
C/T 44364445 missense_variant p.Pro13Leu
C/T 44364448 missense_variant p.Thr14Met
A/G 44364451 missense_variant p.Gln15Arg
A/G 44364455 synonymous_variant p.Lys16Lys
G/A 44364484 missense_variant p.Cys26Tyr
C/T 44364508 missense_variant p.Thr34Ile
C/A 44364533 intron_variant
T/C 44364560 intron_variant
C/T 44364562 intron_variant
A/G 44364564 intron_variant
A/C 44364565 intron_variant
A/C 44364577 intron_variant
A/G 44364588 intron_variant
T/C 44364604 missense_variant p.Cys40Arg
G/A 44364609 stop_retained_variant p.Ter41Ter
G/A 44364624 synonymous_variant p.Pro46Pro
G/A 44364627 missense_variant p.Met47Ile
A/G 44364652 missense_variant p.Thr56Ala
C/T 44364722 missense_variant p.Ser79Leu
A/G 44364745 missense_variant p.Thr87Ala
A/G 44364762 synonymous_variant p.Leu92Leu
A/T 44364777 synonymous_variant p.Ser97Ser
G/T 44364789 synonymous_variant p.Ala101Ala
G/A 44364796 missense_variant p.Ala104Thr
T/C 44364804 synonymous_variant p.Cys106Cys
C/T 44364805 missense_variant p.Arg107Cys
G/T 44364814 missense_variant p.Val110Leu
T/C 44364815 missense_variant p.Val110Ala
T/C 44364840 synonymous_variant p.Ser118Ser
C/T 44364848 missense_variant p.Ser121Leu
A/G 44364859 missense_variant p.Asn125Asp
T/C 44364863 missense_variant p.Leu126Ser
C/T 44364865 missense_variant p.Pro127Ser
T/G,A 44364867 synonymous_variant p.Pro127Pro
C/T 44364901 stop_gained p.Gln139*
G/A 44364908 missense_variant p.Ser141Asn
A/T 44364958 stop_gained p.Lys158*
A/T 44364959 missense_variant p.Lys158Ile
C/T 44364971 missense_variant p.Ser162Phe
C/T 44364982 stop_gained p.Gln166*
T/C 44364987 splice_donor_variant&intron_variant
C/G 44365013 intron_variant
T/A 44365021 intron_variant
G/C 44365031 intron_variant
T/C 44365068 intron_variant
T/C 44365078 intron_variant
C/T 44365085 intron_variant
T/C 44365106 missense_variant p.Cys169Arg
C/T 44365115 missense_variant p.Pro172Ser
C/T 44365136 missense_variant p.Pro179Ser
G/A 44365151 missense_variant p.Ala184Thr
C/T 44365157 missense_variant p.Arg186Cys
G/A 44365158 missense_variant p.Arg186His
G/A 44365175 missense_variant p.Gly192Ser
C/T 44365177 synonymous_variant p.Gly192Gly
C/A 44365184 missense_variant p.Arg195Ser
G/A 44365190 missense_variant p.Ala197Thr
T/G 44365215 missense_variant p.Val205Gly
C/T 44365222 synonymous_variant p.Pro207Pro
G/A 44365234 synonymous_variant p.Pro211Pro
A/C 44365239 missense_variant p.Asn213Thr
T/C 44365255 synonymous_variant p.Arg218Arg
C/T 44365266 missense_variant p.Ala222Val
T/C 44365274 missense_variant p.Ser225Pro
T/G 44365299 missense_variant p.Phe233Cys
C/T 44365300 synonymous_variant p.Phe233Phe
A/G 44365302 missense_variant p.His234Arg
C/T 44365306 synonymous_variant p.Asn235Asn
C/T 44365307 missense_variant p.Arg236Cys
C/T 44365315 synonymous_variant p.Leu238Leu
C/T 44365319 synonymous_variant p.Leu240Leu
T/C 44365325 missense_variant p.Cys242Arg
T/C 44365327 synonymous_variant p.Cys242Cys
A/G 44365337 missense_variant p.Ile246Val
C/A 44365388 intron_variant
C/G 44365389 intron_variant
C/T 44365415 intron_variant
C/A 44365424 intron_variant
T/G 44365445 intron_variant
C/A 44365446 intron_variant
T/C 44365449 intron_variant
T/C 44365494 intron_variant
A/C 44365500 intron_variant
G/A 44365502 intron_variant
C/T 44365503 intron_variant
A/G 44365509 intron_variant
G/C 44365529 missense_variant p.Lys258Asn
A/T 44365594 missense_variant p.Lys280Met
A/G 44365598 synonymous_variant p.Lys281Lys
C/T 44365601 synonymous_variant p.Asn282Asn
C/T 44365607 synonymous_variant p.Phe284Phe
C/T 44365622 synonymous_variant p.Pro289Pro
G/A 44365623 missense_variant p.Glu290Lys
G/A 44365626 missense_variant p.Glu291Lys
C/T 44365674 synonymous_variant p.Leu307Leu
G/A 44365685 synonymous_variant p.Ser310Ser
C/T 44365687 missense_variant p.Pro311Leu
C/T 44365700 synonymous_variant p.Pro315Pro
C/T 44365710 missense_variant p.Pro319Ser
C/T 44365720 missense_variant p.Pro322Leu
G/A 44365721 synonymous_variant p.Pro322Pro
C/A 44365735 missense_variant p.Pro327His
T/C 44365776 missense_variant p.Tyr341His
A/C 44365777 missense_variant p.Tyr341Ser
G/A 44365796 synonymous_variant p.Gln347Gln
C/G 44365804 missense_variant p.Thr350Arg
T/A 44365809 missense_variant p.Leu352Met
A/T 44365813 missense_variant p.Glu353Val
G/A 44365820 missense_variant p.Met355Ile
G/T 44365821 missense_variant p.Gly356Trp
G/A 44365822 missense_variant p.Gly356Glu
G/T,C 44365831 missense_variant p.Arg359Thr
T/A 44365837 missense_variant p.Ile361Asn
C/A 44365838 synonymous_variant p.Ile361Ile
A/C 44365897 missense_variant p.Tyr381Ser
C/T 44365926 missense_variant p.Arg391Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17975.1
MPLKESPTMGLSPTQKPPTSSSASFCTTRTSSVTEEKNLMLDWVGPDVCNYTYVFYAQALDNPKIRTVVGIDLNHDDIVGYVPEELDLLTNLTLLHINTNRVCGTVSHKCDKLKLLFELDLSNNQFAWKSSLGTVCWKTVQYVLFQTQDNPRWNMELKSNQILPKTVKLLSTGAHLNDAGPDDSTPPRRLTRQRTLRHLSNHDIGFSLFHSAESFSASLEPRYAFEHCSLSNFPQPLPLPEVSLTHRAKSINSSSLANKRFHGCMPAGIGNMKGLNEIILKKNAFRSCFPEEIGLLKNLTVFDVSFKLLYSPLYFPCSPPPPPPVYSPPPPVYSPPPPPLVYSLPPHQESTTLEAMGKRRMIEKKEKDEEKLKRKWEEKRKYVRDVVVGCRRVKLEF*


CDS Sequence:
>Vu_17975.1
ATGCCTCTGAAGGAATCTCCCACAATGGGCCTCTCACCGACGCAGAAACCACCTACATCAAGCAGCGCCAGCTTCTGTACTACAAGGACGAGTTCGGTGACAGAGGAGAAAAACCTCATGCTAGACTGGGTGGGGCCCGATGTCTGCAACTACACCTACGTCTTCTACGCTCAAGCACTTGACAACCCTAAGATCCGCACCGTCGTCGGAATCGACCTCAACCACGACGACATTGTCGGGTATGTCCCCGAGGAGCTCGACTTGCTCACTAACCTTACGCTCCTCCACATCAACACCAACCGCGTCTGCGGCACCGTGTCGCACAAGTGTGACAAGCTCAAACTCCTCTTCGAGTTGGATCTCAGCAACAACCAATTTGCCTGGAAGAGCTCCTTGGGGACCGTGTGTTGGAAGACAGTGCAGTATGTATTATTCCAGACACAAGACAATCCTCGTTGGAACATGGAACTTAAAAGCAACCAAATCCTACCCAAAACAGTAAAATTGCTTTCCACCGGAGCCCACCTCAACGATGCCGGACCTGATGACAGCACTCCGCCACGGCGGTTGACCAGGCAGAGGACGCTCCGCCACCTCAGCAACCATGACATTGGTTTCTCCCTCTTCCACTCCGCTGAATCTTTTTCTGCCTCGTTGGAGCCCCGCTACGCTTTCGAACACTGCTCCCTCTCTAATTTTCCACAACCGCTGCCTCTCCCTGAAGTGTCGTTGACCCATCGAGCCAAGTCAATCAATTCCAGTTCCCTTGCCAACAAGCGCTTCCATGGCTGCATGCCGGCTGGAATCGGCAACATGAAGGGGTTGAACGAGATTATTCTGAAGAAAAACGCTTTCAGGTCGTGCTTCCCCGAGGAGATAGGGTTGCTGAAGAACTTGACGGTGTTCGATGTGAGCTTCAAACTGTTGTACTCGCCGTTGTACTTCCCCTGTTCCCCTCCGCCCCCACCGCCGGTGTACTCGCCTCCACCACCAGTGTACTCGCCGCCACCACCACCTCTAGTGTATTCGCTTCCTCCACACCAGGAATCAACAACATTGGAAGCAATGGGGAAGAGAAGAATGATCGAAAAGAAAGAGAAAGATGAAGAAAAACTCAAACGGAAATGGGAAGAGAAAAGAAAATACGTTAGAGATGTGGTGGTGGGGTGTAGGCGTGTAAAATTAGAGTTTTGA


Promoter Sequence:
>Vu_17975::LG4:44362408-44364408(+)
GTATAATATAAAATAGTTCATGTGTATTTTTTCACATATATGTTATGGGTAATCAAACGAGTAAGAGATCAAATTATTTTTTAGAAAAGTACTATCTATAATTACTCCTACTTGTCTTTTCTAGTTGTATTGGATATAAAGAAGAACACTGAATTATTTTTAAAGAAATTAAGGTGAAGTTCCTTTTAGTTTAGTCTTTAGTAATTCCTGAATAAAATTACTTATCTAAACTATAATTTACATATTTAGAAAACATGTTATAAAATAAGATTTATATTTTAATAACTAAATCAGTTCAGCTAGTTCAAAAGTGTAGCTTGATTTTATTCACTTAAATTATAATTCAGTTCAATAAATCTGAATAATTTTACAATTTAGTTTAATTCACTCTATTTCTAGATTTTAGTTTGATTTAAAATAGTTTATTTCAGATATTTTATTCCGTAACTATAATTGTATTAATTGGAAGAATAATCTCTATTAGTTAAGGGAACCATATTACTTAAATATTAACCTAAAACATCCATGATTTATACTTGTTTTTCAAAGGTTATTTTAGACCATACAATGCTCCTAAATTTAAATATCTCTCATATAATCATTATAATTCTAAGGTTAAGTTAACATTGCAATGTCAGTTCTAAATTAATTTTATGAATCTTATATTCAACTTATTTTTTTAGTAGTTTGATTTTTATTTTTTTCATTAATATGTCCCTTTTAAAACGTAACTCGTAAGCAATATTTGTTTTCATAATTCACAGGATTTTACTTAAGAAATCAATCATGTGTTTTAATAATAAATTTTATTAAATAATATTGGTTAAAATAAAATAACATTGAAAAACAATGAGGAGATGATGGAATATCTCTTGAAAGGAAATTTCTTCCTGCAATACCACGTTTTCTTCCTGCATGTCCACACTTTCTAAAAATCCAATTATATCCCTACTGAAATTAATAAAAATGGACAGCGTATGATTTTATATTTATTTTAATTATAGTTTTGGATTGGGTAACCCGTAATATAAATTTACATTATGAATTGTCTAACTCAAATTTGTAAGACAATTCAAAATATAAATTATATTTTAAATATATAAAATATATTTTAAATTTGTAAGAATGCACCTATGGGCCCACATATTCGATTTTCCTTTTTATCATAGGGGACTTCTTTCTATATCTCCATTGTTTTCTTATAATAGTTAATGACGTTTAAACAAAATTAAATATTTTATACTAAAACTTATTTTTTATTTATTCTACTACTATTTATCCTTAATTTTATGTATGATGTATGATGTCTAACTTATCTAGAAAATCTTTAGAATGAAATAAGCACAAGTGATAATGGAAAGTACTCTTCATATACCACACAAATCCTATCATTGAGGCTGGCAATTCCATCTAACCCGTACTAAAATTATTGTTCTAACCTTGGAATATAATATGCCATTAATAAATTTACGCCGGAATGGATTGAATAACTAGATAATGCAATACCTGATTTTGAATAGTATATGTTTTCTCGTTCATATGTGCAAATCTTTTCATGTATACATCTAGAGAATTTCTTTCTGCACAAGTATATGTTTTCTTCTTGCACTTTCATCTCTACTCAATGCCTTCGCATTGCTCTTGCCACACACCAACTACTACTACAAGGTATGTTTAATTGATTTTCTTCCAATTAATTTATTTTGCACTGATTAACTTTAGTTTACACCGATTAAATTTCATTTGCACCGATTAAATTTTGTTTGCACCGATTAAATTTTGCTTATGATTCAGTTTTGTGCAAGACTTGATGGATCTTAATGGTGACATTAAGTGTTCAATCTTGATTGCTTGAAACTCATAGTATATACAATTTTTTGGACGTTGCTCCCTACACCACCACTCCTTGCTCCCAGTACCTCTCCGTTTCTGGTTTGCCCTTGAGTCAAATTTAATTTAACGTTTGTCTTCTTCGTCGTTGTGCTTTTGCAGTCACTCTA


Gene Sequence:
>Vu_17975(+)
ATGCCTCTGAAGGAATCTCCCACAATGGGCCTCTCACCGACGCAGAAACCACCTACATCAAGCAGCGCCAGCTTCTGTACTACAAGGACGAGTTCGGTGACAGAGGAGAAAAAGTAACCGTAGATCCCTCTTTCGAACGACCGTTTGAGAAATGCGAAATGGAAGCAGGACATTCTCTCTAATCCCAAAAGCCTCATGCTAGACTGGGTGGGGCCCGATGTCTGCAACTACACCTACGTCTTCTACGCTCAAGCACTTGACAACCCTAAGATCCGCACCGTCGTCGGAATCGACCTCAACCACGACGACATTGTCGGGTATGTCCCCGAGGAGCTCGACTTGCTCACTAACCTTACGCTCCTCCACATCAACACCAACCGCGTCTGCGGCACCGTGTCGCACAAGTGTGACAAGCTCAAACTCCTCTTCGAGTTGGATCTCAGCAACAACCAATTTGCCTGGAAGAGCTCCTTGGGGACCGTGTGTTGGAAGACAGTGCAGTATGTATTATTCCAGACACAAGACAATCCTCGTTGGAACATGGAACTTAAAAGCAACCAAATCCTACCCAAAACAGTGTAGGTTGTTTCCATAGTTTTGCTTCGCAATGTTATAGTCCCATTGCAACCACCAATTGTTAAATACACAACCCTCTTTCACTAACAATCACTACTCTCCGATGCCTCTTTCCAGAAAATTGCTTTCCACCGGAGCCCACCTCAACGATGCCGGACCTGATGACAGCACTCCGCCACGGCGGTTGACCAGGCAGAGGACGCTCCGCCACCTCAGCAACCATGACATTGGTTTCTCCCTCTTCCACTCCGCTGAATCTTTTTCTGCCTCGTTGGAGCCCCGCTACGCTTTCGAACACTGCTCCCTCTCTAATTTTCCACAACCGCTGCCTCTCCCTGAAGTGTCGTTGACCCATCGAGCCAAGTCAATCAATTCCAGTTCCGTACATCCTCCCTTCTCTGCTTCCTTAGAACATCCTAATTTTTCTTCTTCCGAGTAAACTTTGTTTCATCGTTCAAAATTCTTTGTACTCTAATTCAATTTACAAAATTGAAAACAAGCATGCAAGTATAGTAGAGGCTTTGAATTCTAAAGCTTGCCAACAAGCGCTTCCATGGCTGCATGCCGGCTGGAATCGGCAACATGAAGGGGTTGAACGAGATTATTCTGAAGAAAAACGCTTTCAGGTCGTGCTTCCCCGAGGAGATAGGGTTGCTGAAGAACTTGACGGTGTTCGATGTGAGCTTCAAACTGTTGTACTCGCCGTTGTACTTCCCCTGTTCCCCTCCGCCCCCACCGCCGGTGTACTCGCCTCCACCACCAGTGTACTCGCCGCCACCACCACCTCTAGTGTATTCGCTTCCTCCACACCAGGAATCAACAACATTGGAAGCAATGGGGAAGAGAAGAATGATCGAAAAGAAAGAGAAAGATGAAGAAAAACTCAAACGGAAATGGGAAGAGAAAAGAAAATACGTTAGAGATGTGGTGGTGGGGTGTAGGCGTGTAAAATTAGAGTTTTGA