Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17920 LG4 42389884 42393290 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 42389951 missense_variant p.Pro786His
G/T 42389952 missense_variant p.Pro786Thr
T/A 42390003 missense_variant p.Ile769Phe
T/A 42390011 missense_variant p.Lys766Ile
G/A 42390025 synonymous_variant p.Asp761Asp
T/C 42390026 missense_variant p.Asp761Gly
A/G 42390088 synonymous_variant p.Asp740Asp
G/A 42390110 missense_variant p.Thr733Ile
C/G 42390469 intron_variant
G/A 42390619 missense_variant p.Thr609Ile
A/G 42391068 synonymous_variant p.Leu459Leu
C/T 42391090 missense_variant p.Gly452Glu
C/T 42391098 synonymous_variant p.Arg449Arg
G/A 42391238 intron_variant
T/C 42391262 intron_variant
G/T 42391267 intron_variant
A/G 42391294 intron_variant
A/G 42391299 intron_variant
A/G 42391393 intron_variant
C/T 42391424 intron_variant
G/A 42391457 intron_variant
G/T 42391462 intron_variant
C/T 42391573 missense_variant p.Val407Ile
T/C 42391775 synonymous_variant p.Val339Val
T/A 42391998 splice_region_variant&intron_variant
G/A 42392037 missense_variant p.Ser319Leu
G/A 42392075 synonymous_variant p.Thr306Thr
A/C 42392310 stop_gained p.Leu228*
T/G 42392361 stop_lost p.Ter211Serext*?
A/G 42392514 missense_variant p.Leu160Ser
T/A 42392536 stop_gained p.Lys153*
G/T 42392551 synonymous_variant p.Arg148Arg
T/C 42392557 missense_variant p.Ser146Gly
T/G 42392664 missense_variant p.Lys110Thr
G/A 42392808 missense_variant p.Ala62Val
G/T 42392871 missense_variant p.Pro41Gln
A/T 42392878 missense_variant p.Cys39Ser
G/A 42392882 synonymous_variant p.Phe37Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17920.1
MEDGSASNVGCDDVVHMVGFHGLGGVGKTTLAAAVYNSIADHFEALCFLENVRETSSKHGLLHLQSNLLSETVGEIKLTSVKKGISVIQHRLQQKKVLLILDDVDKEEQLKALAGRPHWFGLGSRVIITTRDKQLLKCHRVKRTYEVNELNEENALELLTWKAFKFEQFDPSYKDVLNLAVTYASGLPLALEVIGSNLCGRNIEQWKYALDKYKKIPKMDIQDTLKVSYDALEEDEQSVFLDIACFFKNYDLAEVEDILRAHHGHSIKHHIDVLVEKSFIKISLDGKVTLHNLIEDMGREIVRRESPKEPGKRSRLWFPQDIVQVLEDNKGTGQIEIICVDFPSFEEVEIEWDGDAFKKMKNLRTLIIRNCHFSKGPKHLPNSLRVMEWWRYPSQNFPQDFHPKKLAVFKLPYYAEGCSRLKSFPPIKLTSLEQLKLRYCHSLQNFPEVLGNMEYVRELDLKETPVKKFPPSFRNLTRLQKLHLCLSVRVMKSGCDGLPLSSICMMPELVDIAANEWEGGLFREANEGAEKVSSILSTNVQYLQLRCCNLTDDFFPTLLPWFANMKNLDLSGNNFTVIPECIKEFHFLTRLNLNFCERLQEIRGIPPNLKHFFAIDCQSLTSSCRSMLLNQELHEAGSTFFYLPGAKIAEWFEIQTLELPISFWFRGKLPAMAICLAMERVWEYSSSEGGKYRPLVIHSTFRLMSPIVIINGNEHLLETWEMLDDCTCVFDLRETKLKNDLDEELVENEWNHAEVTCRYVSLDQTLIKHGIHVFKQESSVEEIRFTDPSRKRNLDMMNSIAQNHSSNSC*


CDS Sequence:
>Vu_17920.1
ATGGAAGATGGCTCTGCATCAAATGTTGGATGTGATGATGTTGTCCACATGGTGGGGTTCCACGGACTTGGTGGAGTAGGGAAAACGACACTTGCTGCTGCAGTTTATAATTCCATTGCTGACCATTTTGAAGCTTTATGTTTTCTTGAAAACGTGAGAGAAACTTCGAGCAAACATGGGTTACTGCATCTCCAAAGCAACCTTCTTTCTGAAACAGTAGGAGAGATTAAGTTAACAAGTGTCAAAAAGGGAATTTCTGTAATACAGCACAGGCTCCAGCAAAAGAAGGTTCTTTTGATTCTAGATGATGTTGACAAAGAGGAACAACTAAAGGCACTTGCTGGAAGACCACATTGGTTTGGTCTAGGCAGTAGAGTCATCATAACAACTCGAGACAAACAGTTGCTAAAATGTCATCGGGTTAAAAGAACATACGAAGTGAACGAATTGAATGAGGAAAATGCTCTTGAATTACTTACTTGGAAAGCTTTCAAGTTTGAACAATTTGATCCAAGTTACAAGGATGTTTTGAATCTGGCAGTAACTTATGCCTCGGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTATGTGGAAGAAATATAGAACAATGGAAGTATGCTTTGGATAAGTACAAGAAAATTCCTAAAATGGATATCCAGGACACACTTAAAGTGAGTTATGATGCTTTGGAAGAAGATGAACAGAGTGTTTTTCTTGACATTGCTTGTTTCTTCAAAAACTATGATTTGGCAGAGGTCGAAGATATACTTCGTGCTCATCATGGTCATAGCATTAAACATCATATTGACGTGTTGGTCGAAAAATCTTTCATAAAGATTAGTTTGGATGGTAAAGTGACACTACATAATCTGATAGAAGACATGGGTAGAGAAATTGTGCGGAGAGAATCACCCAAAGAGCCTGGGAAACGTAGCAGGTTATGGTTCCCTCAGGATATAGTTCAAGTTTTAGAAGACAATAAGGGAACTGGTCAGATTGAAATCATATGCGTAGATTTCCCTTCATTTGAAGAAGTGGAAATAGAATGGGATGGAGATGCCTTCAAAAAGATGAAAAATCTCAGAACACTTATTATCAGAAATTGTCATTTCTCCAAAGGTCCAAAACATCTTCCTAATTCTTTGAGAGTGATGGAATGGTGGAGATATCCTTCACAGAATTTTCCACAGGATTTTCATCCGAAGAAACTTGCTGTATTCAAGTTACCATACTATGCAGAAGGTTGCTCCAGGCTCAAGAGTTTTCCTCCAATCAAGTTAACTTCTCTTGAGCAACTCAAACTTCGGTATTGTCACAGTCTTCAAAATTTTCCAGAAGTATTAGGAAACATGGAATATGTAAGAGAACTTGACTTGAAAGAAACTCCTGTAAAAAAATTCCCACCTTCATTTCGAAATCTTACACGGCTGCAAAAGTTACATCTGTGTTTGAGTGTTCGAGTAATGAAAAGTGGTTGTGATGGCCTTCCCCTTTCAAGCATTTGCATGATGCCAGAACTGGTTGATATTGCAGCAAATGAATGGGAAGGGGGGCTTTTCCGTGAAGCCAATGAGGGTGCAGAAAAAGTGAGCTCAATCTTGTCTACAAACGTTCAATATCTTCAACTCAGATGCTGCAACTTAACAGATGATTTTTTTCCAACACTTCTCCCATGGTTTGCTAATATGAAGAACTTAGACCTATCAGGGAATAATTTCACAGTCATTCCAGAATGCATCAAAGAATTCCACTTTTTAACAAGGCTTAATTTGAACTTCTGTGAGCGACTTCAAGAAATTAGAGGCATTCCTCCAAACCTGAAACATTTCTTTGCAATAGATTGTCAATCCTTGACTTCCTCATGTAGAAGCATGTTACTAAATCAGGAACTGCATGAGGCTGGAAGCACCTTCTTTTATTTGCCAGGAGCCAAGATTGCAGAGTGGTTTGAGATTCAAACATTGGAACTGCCAATTTCTTTCTGGTTTCGTGGCAAACTCCCAGCCATGGCTATTTGTCTTGCAATGGAACGAGTGTGGGAGTATTCCTCATCAGAAGGTGGTAAATACAGACCCTTGGTGATCCATAGCACATTTAGACTCATGTCACCCATTGTGATCATCAATGGCAACGAACATTTGTTAGAAACTTGGGAGATGTTGGATGATTGTACTTGTGTTTTTGACCTGAGGGAGACAAAACTGAAAAATGATTTAGATGAAGAACTTGTGGAAAACGAATGGAACCATGCAGAGGTTACGTGTCGATACGTGAGTTTAGACCAAACCTTAATAAAACATGGAATCCATGTATTTAAACAGGAAAGTAGCGTGGAAGAGATTCGATTCACTGATCCTTCCAGAAAAAGAAATCTTGATATGATGAACTCAATAGCTCAAAATCACAGCAGCAACAGTTGCTGA


Promoter Sequence:
>Vu_17920::LG4:42393290-42395290(-)
ACTACGACAAAAAATGTGTCTCTCGATCCCAATAATTATATACAGAAACAAAAATGAATAAGGACATAACACCGTCTTTTAAAAATTAGGACTCCTCAAATAACGAGTGAACATAATCAACCATACCCAACTTGACTCTAGTCTACTTCTCATATATACAATGTTCCAAAAAGACAAGTTTTGTCACCTAACAAAGACACTCGTTTAAAATAGACATTCCAACTTCACTCATACGTTGAGACACATATGTCCATCCTTTTATCAAATGGTGCACCTTTGAATTAAAAGTTACCTTTGAATAAAAATTCTAAAATTATTATTATTTCTAGGTAAGTCATAGGTAGTAAAAACAACTTATCTACACACGATTTTAATTCTTTTAAATCAAAAGTCGTAAACATAAAAAAGAGTTCAATTTAACTATATTTATACTGAAGTCGAATTGTTGTCGTTATTTAATACATAAATCTAGAAATCGTGCTCTCACAGCACGAGTTTGATAAAAATATTGAAATAAGAAATTGTGTCTGGGAAATAGGACTCTTAATTTGACATAGAAAATCAGAATCTCCCTAATCTTCTCATTGAAATTATGCTGAGTCCCAGTGAGATTCTGCTGCGTATAAGGCACCAAAACCCAATCCACTAAGATTAAGCCCCCCATTATTAGCCCTCTGAAAAACTGCCGAACACCAAATCTTCTTTCAATATTTTCACCAAACTCATTATGAGGATATGACTTCTGATTTCACCACGACTTCAATGACCTTACGGCACATATTATTCCGCATAAGGACAACACCACATTAATAATCCATGCATCACCCATGGATCTTATCTAACCTTATCATTTTTTTTCAACTGAAACTCCTTACATTTCTAACAAATACTAATACTTTCTAAACTTTTGTTCTTATATAGCATTCATAGTTAGAACTCCTAACACCTTAGATACTATGTGTTCCTAAATTAATGAAGATAACATCCTTATATCTTAGGTTTAATCCTTTTCGACATTCTTATTTATGTACGAATGTCTCAATTGGGTCCTCGTTTTCTAAAGTGTATCAAAATGGTCCTTAATTTTGTATCAATTGAATCTTTTCCGTTAAGTTGGCTGGACGGCGTTAAAAAAATTGATGAGTGGATGCTGAGATGACGAACAAACGCTCATCCACCAGGGAACGAACGCTCGTCCACCAACGAACGAACGTTCGTCGACCACCGAACGAACGCTCGTCCAGCAGTAAGAGGTCGACGAGCGTTCGTTCTCTGGTGGACGAGCGTTCGTTCGCTGGTGGACGAGCGTTTGTTCGTCATCTCAGCATCCACTCATCAATTTTTTTAACGTCGTCCAGCTAACTTAACGGAAAGGACTCAATTGATATCAATTTTCAAAATTAGGGACCATTTTGATACACTTTAAAAAACGAGAACCCAATTGAGACATTCGTACATAAGGGATGTCGAAAAGGATTAAACCTATATCTTACTTAACTTTGTCAATTTTTTTTTCTTCTTATATAGCGATTCATACTTAGAATTCCCAATACCTTTCCTTTCACTTCTCATGCCATGCAATCATCTCCTTCTTCCTTCCCTTACAGATTCAGATATGATGTGTTCCTCAGTTTTCGAGGGAAAGATACCCGCCAAGGTTTCACAGGAAATCTCTACAAATCTCTTTGTGACAGAGGAATTCACACCTTCATCGATGACCACCACCTTCCCAGAGGAGACCAGATTTCCTCTGAACTTGAGAACGCAATCCAAGACTCCAGAATTTTCATCATTGTCCTCTCTCAAAACTATGCATCTTCCTCCTTCTGCTTAAATGAACTTCATTACATCCTGAGGTTTATTAAGCATAAGGGTCGGTTGGTTTTCCCAGTTTTTTATGGAGTTGACCCTTCTCATGTGAGACACCACACAGGTACTTTTGGAGAGGCGTTGGCTCATCATCAAAATAATTCTTATTACAACTGGGAGAAGCTTGAGAC


Gene Sequence:
>Vu_17920(-)
ATGGAAGATGGCTCTGCATCAAGTGGCTAACTTGTCTGGCTACCATTTCAAACATGGGTACACCATTCCTCTCCCATTATTTTCTTTTAAAACTTTTCATACTGATAAATTTTGGAGCACAGACTTTTAAAAAAGCATATAAAGAGTTTAGCTTGACTTCTCACAAAATTTTCTGATTGAACAGGGAAGGATATGAATATGAGTTCATTGAGAGGATTGTTGAGTTGGTCTGCAGCAAGATTAACCGTGCTGCTTTACATGTTGCGGATTACCCAGTTGGATTAGAGTCACAGGTGCTGGAAGTAAAGTTGCTTCTAGATGTTGGATGTGATGATGTTGTCCACATGGTGGGGTTCCACGGACTTGGTGGAGTAGGGAAAACGACACTTGCTGCTGCAGTTTATAATTCCATTGCTGACCATTTTGAAGCTTTATGTTTTCTTGAAAACGTGAGAGAAACTTCGAGCAAACATGGGTTACTGCATCTCCAAAGCAACCTTCTTTCTGAAACAGTAGGAGAGATTAAGTTAACAAGTGTCAAAAAGGGAATTTCTGTAATACAGCACAGGCTCCAGCAAAAGAAGGTTCTTTTGATTCTAGATGATGTTGACAAAGAGGAACAACTAAAGGCACTTGCTGGAAGACCACATTGGTTTGGTCTAGGCAGTAGAGTCATCATAACAACTCGAGACAAACAGTTGCTAAAATGTCATCGGGTTAAAAGAACATACGAAGTGAACGAATTGAATGAGGAAAATGCTCTTGAATTACTTACTTGGAAAGCTTTCAAGTTTGAACAATTTGATCCAAGTTACAAGGATGTTTTGAATCTGGCAGTAACTTATGCCTCGGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTATGTGGAAGAAATATAGAACAATGGAAGTATGCTTTGGATAAGTACAAGAAAATTCCTAAAATGGATATCCAGGACACACTTAAAGTGAGTTATGATGCTTTGGAAGAAGATGAACAGAGTGTTTTTCTTGACATTGCTTGTTTCTTCAAAAACTATGATTTGGCAGAGGTCGAAGATATACTTCGTGCTCATCATGGTCATAGCATTAAACATCATATTGACGTGTTGGTCGAAAAATCTTTCATAAAGATTAGTTTGGATGGTAAAGTGACACTACATAATCTGATAGAAGACATGGGTAGAGAAATTGTGCGGAGAGAATCACCCAAAGAGCCTGGGAAACGTAGCAGGTTATGGTTCCCTCAGGATATAGTTCAAGTTTTAGAAGACAATAAGGTGAATAAGATTGATTAATTGGATGGTTTGGTTTTTCCTCTTTAACATGGAACTATCCCTTTTGAATATTATATGTTCGTGTCATGTCACAGTTACTTGTATTGTATGCTTTATAATTTGTACACTTCTCTATGTATGCATGTTGAAATCCTAATATTGAATCATGTCTTGTGGTTGTTTCATGATTTTTCTATTGAAAGGGAACTGGTCAGATTGAAATCATATGCGTAGATTTCCCTTCATTTGAAGAAGTGGAAATAGAATGGGATGGAGATGCCTTCAAAAAGATGAAAAATCTCAGAACACTTATTATCAGAAATTGTCATTTCTCCAAAGGTCCAAAACATCTTCCTAATTCTTTGAGAGTGATGGAATGGTGGAGATATCCTTCACAGAATTTTCCACAGGATTTTCATCCGAAGAAACTTGCTGTATTCAAGTTACCATACTGTGAGTTTACATCACTAGAGTTGACTGACTTATTAAGACAGGCAAGTGTATTGAGTTCATTTCCTTGTTTCTGTAACTTGATAACTTCACTTCAAGGCCATTTATGTGTTTCCATGTGATGTTTATATCCGTAAGTTATCTTTTACTTTGTTGATTTGCTTTCTTTTTGTATGTTGCAGAAGTTTGTGAATATGACAAGTTTAAATTTTGACGAATGTCGATATTTGAAACAGATACCTGATGTATCTTGTCTCATACATTTGGAAAATTTGTCATTTCGATGGTGTCCAAAATTATCTTCACTTCACTACTCAGTCGGGTTCTTGGAAAAACTTAAAATCTTAGATGCAGAAGGTTGCTCCAGGCTCAAGAGTTTTCCTCCAATCAAGTTAACTTCTCTTGAGCAACTCAAACTTCGGTATTGTCACAGTCTTCAAAATTTTCCAGAAGTATTAGGAAACATGGAATATGTAAGAGAACTTGACTTGAAAGAAACTCCTGTAAAAAAATTCCCACCTTCATTTCGAAATCTTACACGGCTGCAAAAGTTACATCTGTGTTTGAGTGTTCGAGTAATGAAAAGTGGTTGTGATGGCCTTCCCCTTTCAAGCATTTGCATGATGCCAGAACTGGTTGATATTGCAGCAAATGAATGGGAAGGGGGGCTTTTCCGTGAAGCCAATGAGGGTGCAGAAAAAGTGAGCTCAATCTTGTCTACAAACGTTCAATATCTTCAACTCAGATGCTGCAACTTAACAGATGATTTTTTTCCAACACTTCTCCCATGGTTTGCTAATATGAAGAACTTAGACCTATCAGGGAATAATTTCACAGTCATTCCAGAATGCATCAAAGAATTCCACTTTTTAACAAGGCTTAATTTGAACTTCTGTGAGCGACTTCAAGAAATTAGAGGCATTCCTCCAAACCTGAAACATTTCTTTGCAATAGATTGTCAATCCTTGACTTCCTCATGTAGAAGCATGTTACTAAATCAGGTATTGATTTTACACATTGAATAAGAACGAGCAAGTTGAACAATATATAAGGAAAATTTTAAATTGAAGGTGGTATTTTCAATATCAGAATTGTATATCATGCGCCTAAACTTGATAAATTGTTTATGATTAACAGGAACTGCATGAGGCTGGAAGCACCTTCTTTTATTTGCCAGGAGCCAAGATTGCAGAGTGGTTTGAGATTCAAACATTGGAACTGCCAATTTCTTTCTGGTTTCGTGGCAAACTCCCAGCCATGGCTATTTGTCTTGCAATGGAACGAGTGTGGGAGTATTCCTCATCAGAAGGTGGTAAATACAGACCCTTGGTGATCCATAGCACATTTAGACTCATGTCACCCATTGTGATCATCAATGGCAACGAACATTTGTTAGAAACTTGGGAGATGTTGGATGATTGTACTTGTGTTTTTGACCTGAGGGAGACAAAACTGAAAAATGATTTAGATGAAGAACTTGTGGAAAACGAATGGAACCATGCAGAGGTTACGTGTCGATACGTGAGTTTAGACCAAACCTTAATAAAACATGGAATCCATGTATTTAAACAGGAAAGTAGCGTGGAAGAGATTCGATTCACTGATCCTTCCAGAAAAAGAAATCTTGATATGATGAACTCAATAGCTCAAAATCACAGCAGCAACAGTTGCTGA