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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17915 LG4 42325167 42326289 PREDICTED: myb-related protein 315
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Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to arsenic-containing substance, cellular response to arsenic-containing substance
Cellular Component   located in   nucleus, nucleus, cytoplasm, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_17915.1
MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIHCWRAVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSCLGNRWSKIASHFPGRTDNEIKNHWNTKIKKRLKVLGLDPLTLMPIEQKQQQSGNDDKLKTEKQKKSTSKGSDQGVDSKPLDMHATGEEPKTEDKMEEKKVTWDDTTGFLNNYEMLCSQLELGSWLSQETKASTSSYCSSSFSLDDSSNLSVCESSYLQENSLQQWVEDLDSSLSWDSFNPLHTDFPFFENRQ*


CDS Sequence:
>Vu_17915.1
ATGGGCAGACAACCTTGTTGTGATAAGGTTGGTTTGAAGAGAGGTCCATGGACTATTGAGGAAGATCACAAGCTTATGAATTTCATTCTCAACAATGGTATTCACTGCTGGAGAGCAGTTCCCAAGCTAGCAGGATTGCTGAGATGTGGAAAGAGCTGCAGATTGAGATGGATTAATTATCTGAGACCAGACCTCAAGAGAGGTGGATTTACTGAAATGGAAGAGGATCAAATTATACAACTACATTCATGTCTCGGTAACAGGTGGTCTAAGATTGCTTCACATTTTCCAGGGAGGACAGATAATGAAATCAAGAACCATTGGAACACAAAGATAAAAAAGAGGTTGAAGGTCCTTGGTTTGGACCCTTTGACCCTGATGCCAATTGAGCAAAAGCAGCAACAGTCTGGTAATGATGACAAACTCAAGACAGAGAAACAGAAAAAAAGCACTTCAAAAGGGTCTGACCAAGGTGTGGATAGCAAACCCTTGGACATGCATGCCACAGGAGAAGAGCCAAAAACAGAAGACAAAATGGAAGAAAAAAAGGTAACGTGGGATGACACCACTGGTTTTCTGAACAATTATGAAATGTTGTGCTCACAGTTGGAGTTGGGGTCATGGTTGAGCCAAGAAACCAAAGCCAGCACCAGCTCTTACTGTAGTTCTTCTTTCTCACTGGATGATTCTAGCAACCTTTCTGTCTGTGAATCCTCTTATCTTCAGGAAAATTCCTTGCAACAATGGGTTGAGGATTTGGATTCCAGTCTCTCATGGGATAGCTTCAATCCACTTCACACTGATTTTCCCTTCTTCGAAAATAGGCAATAA


Promoter Sequence:
>Vu_17915::LG4:42323167-42325167(+)
AGAATGCATTTTATAAATACAACTTCAAGTAAAATTCTTAATGTACAATATTTCATTCTCAACAAAAGTGAACTGAGAATTCACGAGACAGAAAACTCTTTAAACTCAAACAAAATAAAATTAACTAATTTTACATTAAAAATGATAGTTAGATGTATTTAATATGTTTTTTTTTTACTTCATACAATACATGAATATATTTTCTAAAGTACATATAACAATATTGGAGATGATTCCTAAATTTAAATACAATAATATTTTAAAAAAATAACTTTAAATAAAACTTTTGAAATTGGAAGCGGCTTATATTTAATAACAATGAACATAAACATAACTCACTTTTTCTCGTGCTGTTTAATCGTAGCATACAAACCCATTTAGGCAACCATGGTCAAATGTTTCTATTCTAATTTTGTGCAAAAATTTGATTATATGATGCAAAATTGCCAAATGTTTGTGCTACTAATGTCTCCTAATTAGGAGAATGGTGGGTTCTAAATTAACAATTTTTTTTGCAACTTATGATTAAAGCTTAAGGGCCACTAGCTTTTCCTTTTTTCTTTCTTCCTCATTTTAGGGTCTTTTGGTTAGTCTTAATCATTAGTCAAAAGATCTTCTAGGGCAATGCACATTAACAAAAATGATTAGAACTTAGGTTAAACCAATGTTGTGTTTTTGACATTTAACATGTGTGCATATATAACCGTACCCTTGTACTTTATTTCAGTCTCACTCACAATTGATTACTTGTTTTTAACTTGTAAAAGAAAACAAAGTTGAAACACACGGTACATATTGAAGGTAGCTAGGAGATAGATCCACTTTTTTACTAACCTCTTTACTCTTTTGAATGATTAGGATTAACACCCCTCTTGATTAAATTTATGCAAATCAATGTTCTTTTCGGAAAGATTTAAACTTTTTAATAAAATATTGCAGTCACAAAAAATAAAATACTCCTACATTTCTAAAACTTACAATGAATATGTTAAAACATGTTGTCATACTGTTTATGAAAAAGGGCATTAGACAAAGAAGAGCTGGTCACTGTCTGTAACTAAGTTAAGAACTCTTTGATTAAAATTTACTAGAGAAAGAAGAAACGGAAGATAGTAAAAATTTCAATACATAATGTAAAACAATTATCAATTTAATTAATTTCTATTAAAGAAACTGACTAACTATTTTTAATTCTTCTCACAATTCCATCTTTTTAATACAGAAAATTTGAATATAACACTTTCCTCTAGAAACTTAATCTCAATGTCACTAAACTATAAGTGGTAAAAAATTACTAACTTGGCCAAAAGATAACATGAAGCTGAGATAGAACAACTAAAGCAAGCACCAAAGTTTGATATATATTAAAACAAAAAATATGTTCCGACTGCTTATATATGCTTTTGTTGTACCTTATTCGTTGTCAATTTTCCAATGTTCCAATCCCCAAATCAATGGAAGAATTTCATGATATCAGTCATAACTGGTGAAGGTATATATATATATATGGTGAAAGATGAAAAGAGGGAATTGCTTACAAGGACAAAGCTTGCCAGCCATTTGGGACCAGGGAATCCCATCAAACTCAATATTTTTATGGTGCTTGCAAGGAATGGTATCAACAAAAGAAGATTTTGGGTGCAAATAATGAAAAATTGTCAACAGGGTGGACTCAGGACTCAGAGATGGTTATTTTTTCTTGCATTGAAAAATTTTGTGGTTGAACAGAAACTCTTGATCTTGTCTGAAGAAGGGTGGTGGTGAGCATCATTTTATAATGACAACCCTTGCATGCCTTTCACAGCTTTCAACTAAAGCAACTTCCATCCAATCATTTGTCACCCCTCTCAAAGGACACCTTGCCCTTATTTAAATGTCTGAATGAACTGGCAGCATCTTTGCTTCAACCTCAATTAAGCTGCTTTTTAAGTGCCCTTCCTTTTGTTAACTCTCAGGGGAATCTAATATCTTGTTTTTCTGCAAAAGGGTAGGTTCCAAAA


Gene Sequence:
>Vu_17915(+)
ATGGGCAGACAACCTTGTTGTGATAAGGTTGGTTTGAAGAGAGGTCCATGGACTATTGAGGAAGATCACAAGCTTATGAATTTCATTCTCAACAATGGTATTCACTGCTGGAGAGCAGTTCCCAAGCTAGCAGGTATTTCCTTTGTGAAAAATTTGTTTACTTGTGACTTTGCCTTAAAGTTGTGTATCATTTGAATTCTGCATTTTTCCTTTTTCTTTCTGTTTGGCATTGTGGTGAAGGATTGCTGAGATGTGGAAAGAGCTGCAGATTGAGATGGATTAATTATCTGAGACCAGACCTCAAGAGAGGTGGATTTACTGAAATGGAAGAGGATCAAATTATACAACTACATTCATGTCTCGGTAACAGGTATCTATATGTATATATAGTTATATGTTGTATGTTACATGTTTATGGCATGGTTTTTGGACAGTGTATTTGAAAAACCTTAATTCTGCCACCAAAATCACAATCCTATGCAATCTTCTCAAAAACTTAAATCATACTTTACAGATTTATAGATGTCTTGTAACACAATGAAGCACATTTTTCAGGTGGTCTAAGATTGCTTCACATTTTCCAGGGAGGACAGATAATGAAATCAAGAACCATTGGAACACAAAGATAAAAAAGAGGTTGAAGGTCCTTGGTTTGGACCCTTTGACCCTGATGCCAATTGAGCAAAAGCAGCAACAGTCTGGTAATGATGACAAACTCAAGACAGAGAAACAGAAAAAAAGCACTTCAAAAGGGTCTGACCAAGGTGTGGATAGCAAACCCTTGGACATGCATGCCACAGGAGAAGAGCCAAAAACAGAAGACAAAATGGAAGAAAAAAAGGTAACGTGGGATGACACCACTGGTTTTCTGAACAATTATGAAATGTTGTGCTCACAGTTGGAGTTGGGGTCATGGTTGAGCCAAGAAACCAAAGCCAGCACCAGCTCTTACTGTAGTTCTTCTTTCTCACTGGATGATTCTAGCAACCTTTCTGTCTGTGAATCCTCTTATCTTCAGGAAAATTCCTTGCAACAATGGGTTGAGGATTTGGATTCCAGTCTCTCATGGGATAGCTTCAATCCACTTCACACTGATTTTCCCTTCTTCGAAAATAGGCAATAA

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