Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17795 LG4 40370394 40372815 PREDICTED: transcription factor MYB3-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 40370483 synonymous_variant p.Gly265Gly
T/A 40370730 missense_variant p.Glu183Val
C/A 40370742 missense_variant p.Gly179Val
T/C 40370765 synonymous_variant p.Leu171Leu
C/T 40370787 stop_gained p.Trp164*
G/A 40370799 missense_variant p.Ser160Phe
A/T 40370800 missense_variant p.Ser160Thr
T/G 40370919 missense_variant p.His120Pro
G/T 40370945 synonymous_variant p.Thr111Thr
C/A 40370978 missense_variant p.Trp100Cys
T/A 40371047 stop_lost p.Ter77Cysext*?
C/A 40371117 missense_variant p.Gly54Val
T/C 40371226 intron_variant
A/T 40371350 intron_variant
A/T 40371487 intron_variant
C/T 40371629 intron_variant
C/T 40371639 intron_variant
A/G 40371650 intron_variant
G/A 40371665 intron_variant
T/G 40371670 intron_variant
A/T 40371674 intron_variant
T/C,* 40371720 intron_variant
T/A,* 40371725 intron_variant
T/C,* 40371744 intron_variant
T/C 40371746 intron_variant
T/C 40371748 intron_variant
T/C 40371764 intron_variant
C/T 40372015 intron_variant
C/G 40372077 intron_variant
A/G 40372118 intron_variant
A/G 40372132 intron_variant
T/C 40372138 intron_variant
T/C 40372147 intron_variant
G/C 40372155 intron_variant
T/A 40372201 intron_variant
A/G,T 40372212 intron_variant
T/C 40372220 intron_variant
A/G 40372225 intron_variant
A/T 40372235 intron_variant
A/T 40372280 intron_variant
A/G 40372397 intron_variant
C/A 40372398 intron_variant
A/C 40372406 intron_variant
A/G 40372409 intron_variant
G/A 40372428 intron_variant
G/T 40372441 intron_variant
G/T 40372468 intron_variant
C/T 40372472 intron_variant
A/T 40372486 intron_variant
T/A 40372490 intron_variant
G/A 40372519 intron_variant
T/C 40372651 intron_variant
A/G 40372722 synonymous_variant p.Leu32Leu
G/T 40372748 missense_variant p.Thr23Asn
A/G 40372796 missense_variant p.Met7Thr
A/G 40372804 synonymous_variant p.Pro4Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17795.1
MRKPDMMAKDKLNTTTTINTTTTNNNNIKSKLRKGLWSPEEDEKLIRWSQIAARLPGRTDNEIKNFWNSTLKKRLKMSSSNINNTSSPNNSDSSDPRDVMGGIMPMNDQHDLMTMCMDSSSSTSSSSMQSMQANMALTDQFDPFPLLSNRYDMTTGAAGFLDNMAACLNQVSMVDHDDGVVHGGYGALEPNKMGLESDFSLPPLESRSIEENSSNPIDVKSHNNNHLKNSCFSNTDHHHHHHHHHNFQTSNNVVVEDLFGFGNHGQGENFRMGEWDFEGLMQDMSYFPSLDFQV*


CDS Sequence:
>Vu_17795.1
ATGAGGAAACCTGATATGATGGCAAAAGACAAACTCAACACCACCACCACCATTAACACCACCACCACCAACAACAACAACATTAAGAGCAAGTTAAGAAAAGGGTTGTGGTCACCTGAGGAAGATGAGAAACTGATAAGATGGTCTCAGATTGCTGCACGGCTTCCTGGTCGCACAGACAATGAGATAAAGAATTTCTGGAACTCAACACTGAAGAAAAGGTTGAAAATGAGCAGCAGCAACATCAACAACACTTCATCACCAAACAACAGTGACTCATCAGACCCTAGAGATGTCATGGGGGGGATAATGCCAATGAATGATCAGCATGACCTCATGACCATGTGCATGGACTCCTCATCATCAACATCATCATCATCCATGCAATCCATGCAAGCCAACATGGCACTAACAGACCAATTTGACCCCTTTCCTTTGTTGTCCAACCGCTATGACATGACCACCGGTGCAGCCGGTTTCCTTGACAACATGGCTGCATGCTTAAACCAAGTTAGTATGGTAGATCATGATGATGGGGTTGTTCATGGAGGTTATGGGGCATTGGAACCTAATAAAATGGGGTTAGAAAGCGACTTTTCCCTTCCTCCACTAGAAAGTAGAAGCATTGAGGAGAATTCTAGTAACCCAATTGATGTGAAAAGCCATAACAACAACCACTTGAAGAACAGTTGCTTCAGTAACACTGATCATCACCATCACCATCATCATCATCATAATTTTCAAACCTCCAACAACGTAGTTGTAGAGGATTTGTTTGGTTTTGGAAATCATGGGCAAGGGGAAAACTTTAGAATGGGAGAATGGGACTTTGAGGGTTTGATGCAAGACATGTCCTATTTCCCTTCCCTTGATTTCCAAGTTTAA


Promoter Sequence:
>Vu_17795::LG4:40372815-40374815(-)
TTTTAGCTTAAGCTTTAGGTTTCAATTTCCATTTGCCAAAAACAATCCCATTTTTATCAAACCTGTACCAGATTTACTTTCTTACAAGAGAGGTTCTACCATGTTGTACATGTACAACGACTACAAGTTTTGTACTGTTCTATTATGCATATATTAATATTAACACAAATTTAGATTACTATAAAGATTTTTATACTATTGAAATTATTTAAGTTATAAGAGATATTAAAATCTAACTCAATTTTACTAAATTAATTTGTAAGATGAGTACAATTGTCCCTTAATTGAAAGTCTTTTTCGTGAAGGGTTTTAGGTAAGTCGGTTAAGATGAACGATTGTACGAATGAATACTCGTGATTGAGAATACTTTTGCTGGAGGGGGAGTGTACCAATGTGAAAGAGACTAACCTTTGAGGGGAGATTGTTGTAAATCTAAGTGAGTCCAAATCCTACATTGGATAAAAATGAGATAGTAGAACATTATATAAAAATGAAAGACTCAATGATCCATTATCTTAAGGTTTTGGGTAAAAAATATTGTCAATTTCTTATGTGATTAGGTTTAGATCTAATTGGCGTGTTGTATTTCTGAGTAATTTTTTTTTTATAATAAACACTTTATATAATTCTGATACCAATTTAAAATATGAATTTTAAGCATAATTTAATCTTAGAAGTTACTTTTTTAAATTAAATTAGATTTAAAATTTATTTATTAAGATTTAGTAAAAAAATTTAAACAAGATGAAGTGAGGTAGTTACTATGGATAAGAAATACACGTATATACAGTACTTGAAGGGCAAGTAGAAGTCGTTGTCAAAGATGGAACAACATGAAGTAAAACAACCTAATATTTATCCATACAGTTAAGTAATCTTAACAGTTTGCAAAAGAACTCTTAACCATGTCGTGTTCATCAGTTAATTAATCCTCGTTCTTAGTATCTTTAAAGAAGCAACCGACTTTTTACAAATACCACTCATTAATAACAGTCTTCAAAGTACTGCAAATTCATTGCAACTATCATCATTGAGCAGTAACTTGTGCAGGTTAAAAGTTAACATTAAAGAAGATTACAAAGTAATAAAAGCTCTTGTACTTAACAGCTCAAAGTCATAAAAACCATGTATAAGCATGTCACGTTTTATAAATTTAAAGTTTCATGATGGTTAATTAACCATAATTTCTGTGAAATAAAATTAACAAATTCCATTGCTTAATTGAGCTTAGTTTGTACTTGTACGAAGATAATTGGCTGTAAGGAAATGATAAATTTATGGTATGAAAAGGGCATTGCTTTGTTAGGAGGTGTACATTGTTTGCTTCAGAAGTATGCCAATGAGTGGTTAGCCCCCCTAATGAAACTCATGCAAAGAATGTAAGTTACACACAACTACAAAACCATTTGAAAATTATCAAACAGTTTTGTCAAGCATGCCACTCTTTTGCCATTATATTAAAAAAATCAGCATACATATATAGGTAACACAGTCTCTCTCTTCTCTCTGGTATATATCAGCACACGTGAATTTGAAGTTTAAAAGCTTTAGTGATAGAAGAGAGAGAGAGAGAGTATTATGTGAAGTGGAAGCAAAATAGTTTCTGTTCCATACACTAAAAGACTATGATTACCTTGTGAGTGAAGTAAAATGAAAAAAGACAAGAATTGAGTCAAAGACAAGAAGAGCAACCATGTTTTCTCTTGATCACTCTCTTTTTTTCTCTTGGCTAAGGAGGTCCCCCTCCAATCCGTTTTCCACTCTACCTATCAACCAACAAACAAACACAATCCCATTTCTCATATTCATATTTTAAGCAAACCCCACAACCATCATCATCATTATTTACCATTCCCACCCCATCAAGCCTTCTCTCTGTCCCTCAAAACCATCATTCACCTATATAGCTTTCTCCTACATCTCCATCACAACCCACTTCATAAGGGCCTCTCAACCCTTTCCCACATCCCTCACACCCCTTTATCACCCCTTTCTGCCAA


Gene Sequence:
>Vu_17795(-)
ATGAGGAAACCTGATATGATGGCAAAAGACAAACTCAACACCACCACCACCATTAACACCACCACCACCAACAACAACAACATTAAGAGCAAGTTAAGAAAAGGGTTGTGGTCACCTGAGGAAGATGAGAAACTGATAAGGTACATGATCACTAAGGGACAAGGATGTTGGAGTGACATTGCAAGGAATGCTGGCCTTCAAAGGTGCGGCAAAAGTTGTCGTCTTCGTTGGATCAACTACCTCAGACCTGATCTCAAACGTGGTGCATTCTCACCCCAAGAGGAAGAACTCATCATCCATTTGCACTCCCTTCTTGGAAACAGGTACCATCTTCATTGCCTTCGTTGCATTATAATGCCAACTTTCTTAATTACCTCAAAGTTCTTACCTTTCTTAAAAAATTAAATGATTTTTTTTGTAAATTATAAAATTAAATTATACATAAAATAATTTTAATTTATGAAAAAACTTATTTCATTTTGTGTTTAATTTTTTTACTTATATTGTTCTTATTAAAACAAATTCCAAACAAGCCTTGGTAATTTCATATCATTAACATCCAGCTCAATCTATAAAGACCTAATTAATTATCGATAAGAACATTTATTCTTAGAAGAGTCCTTATTATAACACAATTTTGGTGGCTTTTATAATTAAATGCCACGTAAATTTAAGAAATTTACTGAGTTTTCTCCAATTGTACAACTTTTAAACTTAAAATAACAACTTTTTATGTGAGAAAAATTACTTACATAACCTACAACTCTTCGGGATTCTTAAGAATGGTAAAACAGTTATAAGATTTCATTTAAGTTGTTATATATCATTGGAGAAAACATTTTTAGTTTTTGAATTTCATGTGACATTATAAATATAGTCCATTAAAAATCGAAGCAATTCTATCATGGTTGTACCACTGGAGGTGTTTTAAAAAGATTAAACTTTTATTAAAATGAATAAACAAAAATGGCTTTGATAAAGAAGTCAAACAAATATTGAAGCAATTGTCATTCAAGATAAATTTAACTTGTAAAGGGTATCTAATTAATATATATATATATATATATATATATATATATATATATATATAAATATATATGTATGTATTATTGTTGATAAAAGAAAAGCTTGTAAAGGGTATTGGGAAAAACTCCAATCAAGATCCTTTTTTATCAAGAAATTGACTGAATATAGGTTTTTATATATAAAATGTGAACATGTTTAACTACATATTTAGATGACGTAGCCTAAAAGCATTTCAGGGGTTTTGCCTTAACTATCATGGTTTAGCTTTCTGCTTAAGGATGACCTGACCCATAATATACATTTGACTATTCACTATAGATCTTTGAAAATCTTTTCTTAACCATCAATATTATTAAATATTAAACCCGTGTCTTCCATCATGTTCATCAGTATAACATCTCAACAATACTTTTTCAACACAACTTTTATGTGCTATAATTATTGACGCTCACGAGATGACGTATACATCACTCTTTATTTCATTAATCTTATGATTACTTCAATACTTTGTGACTAATTAACCCGTTATTATATATATTTAGTTTATATTGGTACAAGACACTATGTATCCATGTAACAGAAGCTACACATAGTATTCAGAAATTTGTACAAGTGTTCCTGTTTTAACCATTTTGAAGTTGTGAATCTCAGATGGTCTCAGATTGCTGCACGGCTTCCTGGTCGCACAGACAATGAGATAAAGAATTTCTGGAACTCAACACTGAAGAAAAGGTTGAAAATGAGCAGCAGCAACATCAACAACACTTCATCACCAAACAACAGTGACTCATCAGACCCTAGAGATGTCATGGGGGGGATAATGCCAATGAATGATCAGCATGACCTCATGACCATGTGCATGGACTCCTCATCATCAACATCATCATCATCCATGCAATCCATGCAAGCCAACATGGCACTAACAGACCAATTTGACCCCTTTCCTTTGTTGTCCAACCGCTATGACATGACCACCGGTGCAGCCGGTTTCCTTGACAACATGGCTGCATGCTTAAACCAAGTTAGTATGGTAGATCATGATGATGGGGTTGTTCATGGAGGTTATGGGGCATTGGAACCTAATAAAATGGGGTTAGAAAGCGACTTTTCCCTTCCTCCACTAGAAAGTAGAAGCATTGAGGAGAATTCTAGTAACCCAATTGATGTGAAAAGCCATAACAACAACCACTTGAAGAACAGTTGCTTCAGTAACACTGATCATCACCATCACCATCATCATCATCATAATTTTCAAACCTCCAACAACGTAGTTGTAGAGGATTTGTTTGGTTTTGGAAATCATGGGCAAGGGGAAAACTTTAGAATGGGAGAATGGGACTTTGAGGGTTTGATGCAAGACATGTCCTATTTCCCTTCCCTTGATTTCCAAGTTTAA