Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17720 LG4 39352885 39356104 PREDICTED: calcium/calmodulin-regulated receptor-like kinase 2 isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 39353242 downstream_gene_variant
T/C 39353355 missense_variant p.Ile262Val
A/C 39353490 downstream_gene_variant
A/G 39353555 downstream_gene_variant
T/A 39353631 downstream_gene_variant
A/T 39353632 downstream_gene_variant
T/C 39353641 downstream_gene_variant
A/G 39353646 downstream_gene_variant
T/A 39353677 downstream_gene_variant
C/G 39353679 downstream_gene_variant
C/G 39353681 downstream_gene_variant
C/G 39353688 downstream_gene_variant
T/C 39353694 downstream_gene_variant
T/A 39353750 downstream_gene_variant
G/A 39353860 synonymous_variant p.Arg204Arg
A/G 39353932 downstream_gene_variant
A/T 39354111 intron_variant
A/G 39354234 synonymous_variant p.Asn161Asn
A/C 39354358 intron_variant
G/A 39354378 intron_variant
G/T 39354649 intron_variant
A/C 39354705 intron_variant
A/T 39354708 intron_variant
A/G 39354747 intron_variant
T/C 39354843 intron_variant
G/A 39354992 intron_variant
A/G,* 39355011 intron_variant
A/G,* 39355013 intron_variant
A/T,* 39355019 intron_variant
T/A 39355343 stop_lost p.Ter111Cysext*?
C/G 39355349 stop_lost p.Ter109Tyrext*?
A/G 39355351 stop_lost p.Ter109Glnext*?
C/A 39355359 missense_variant p.Gly106Val
T/A 39355415 missense_variant p.Gln87His
T/G 39355416 missense_variant p.Gln87Pro
C/A 39355543 intron_variant
T/G 39355597 intron_variant
A/G 39355638 intron_variant
G/A 39355642 intron_variant
A/T 39355663 intron_variant
G/T 39355687 intron_variant
T/C 39355688 intron_variant
A/G 39355704 intron_variant
T/C 39355820 intron_variant
G/T 39355831 intron_variant
T/C 39355897 missense_variant p.Asn70Asp
G/C,* 39355951 missense_variant p.Leu52Val
T/A 39356001 missense_variant p.Lys35Ile
G/C 39356037 missense_variant p.Ser23Cys
T/G 39356054 synonymous_variant p.Ala17Ala
G/A 39356064 missense_variant p.Ala14Val
A/G 39356069 synonymous_variant p.Val12Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17720.1
MVRQTDLVIIGVSAGLALGILISCLIFFGIRWCKKRSAHRRLSANESSVTTLPIRTNGLGTSTDFSASLNSSIATSREIQKSTQNFTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFHTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQYMSNGSLANLIYGEEKGLSWDERLQIVLDISHGIEYLHEGAIPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPAYISTSKLTTQSDIYSFGIIVFELITAIHPHQNLMEYVNLAAMDHDGIDEILDKKLVGKCNLEEVRQLAKIGHKCLHKSPKKRPSIGEVSQFISRIKQRRQRRLTEDNLSFASNNFSRAVSRLEDRQVELSRMSTISLTETL*


CDS Sequence:
>Vu_17720.1
ATGGTTCGCCAAACTGATTTAGTTATCATTGGTGTTTCTGCTGGTTTGGCACTTGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGGTGGTGCAAGAAACGTTCTGCTCATCGTAGACTATCTGCAAATGAGTCTAGTGTCACAACTCTTCCAATACGAACAAATGGGTTGGGAACAAGTACCGACTTTAGTGCATCACTCAATAGTTCCATAGCCACATCAAGAGAAATTCAAAAGTCCACACAAAATTTCACAACAACCTTGGGACAAGGATCATTTGGGACAGTTTATAAAGCGACAATGCCTACAGGGGAGGTTGTAGCAGTGAAGGTGCTTGCACCCAATTCTAAACAAGGGGAGAAAGAATTCCATACAGAGGTATTTCTGCTAGGAAGACTGCATCACCGAAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGGCAACGCATACTGGTTTATCAGTATATGAGTAATGGAAGTTTAGCAAATCTTATATATGGTGAAGAAAAGGGATTGAGTTGGGATGAAAGGCTGCAAATTGTTCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGCAATTCCACCTGTCATACATCGCGATTTAAAGTCTGCCAACATATTGCTAGATCACTCAATGAGAGCTAAGGTTGCTGATTTTGGACTCTCAAAAGAAGAGATCTTTGATGGCAGGAATTCTGGTCTGAAAGGTACATATGGCTACATGGATCCTGCATACATTTCCACAAGCAAGTTAACAACTCAGAGTGACATATACAGTTTTGGTATCATAGTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAGTATGTCAACCTTGCTGCAATGGATCATGATGGTATAGATGAGATACTTGACAAGAAACTAGTGGGAAAATGCAATCTTGAAGAAGTGAGGCAACTTGCTAAGATTGGACACAAATGCCTGCACAAATCACCTAAGAAACGTCCCTCCATAGGTGAGGTTTCTCAGTTCATATCAAGAATAAAGCAACGGCGTCAGCGCCGTCTGACAGAAGATAACTTGTCATTTGCAAGCAACAACTTTTCTCGAGCTGTGAGTCGATTAGAAGATCGACAGGTTGAACTTAGCAGGATGTCAACGATTAGCCTAACAGAAACTCTATGA


Promoter Sequence:
>Vu_17720::LG4:39356104-39358104(-)
TTAAAACTATTTTTCATGTATAAAAAATAATTTTCTAGTAAATTTAGTTTAGTTTATTACAGGATCTCGTTTAATTTTTAATCACAACTTTTAGCTTTGGTTAACATAACTTTCACATTAATCTCATATTATATCTTAAAAGGAAAAATTACTAAACATTTATTGAAAGCTAGAAATATAAATATAAAATGTCAGAAGATAAAGCTTTACGTGAAGCAACACTTCAAAAAATTCTGTAAGTTATTAAAAGTTATTCAAAAAAATACTTAAAAAACTTACTTTTTTTTATTGTTTTAAATTTTTTGGGAAAGTGATATAGGAATAAATCATCAAGGAATATTTAACCATGTTTCTTTAATATTTTTATAAAGTAATTATTAAACATCGATACTAGATTAGTTTTCATAAAAGTACGAGAGAAGACACTTTTAACAATTTTTTTTCTTTAAATAAAATTAAAGTGTTTCTTAATTAAGGTAGATTATTAAATAATCTTTTATTTCTTTTCTCCTACAACATTAAATCTTTAGTTTTATCTATTTTTTTTCCTCTTTTAAATGTTAGTAACTACTACGAAGTGTCTCTACAATGTTTTTTTTTTTTTCATAAAAAAGCAAAGTAAAATATAAAAACAGCAGAAGAATCATAACACAACAAACGAACAAAGAAACAAACATCCTGAAACCTGTACCCATTTTCCCAAGTTTTTAAAACCTTAAAACCCACTCTCACTTCAATTCAACTGCACTTAACGCCCTCACCCACTCCACACCCCTCTTTTTTATCCCCACGCACTACCATTTTCCAATCCAACACAAACACCCCTATCAGTTGCCCTTTCACTCTTTCACTCTCATCACAAACAAAAAAGCAGTTTCTTTCATCAACTTGGTCTTTGTTTCTTCCACGCATACCATTGACTCTGGACTCCAAGGTCAACAACAGGCTCATATACCCAAAAGGGGGTTGATTTCAGAACCATGGTTCGCACTTCGCACACCCCAGATCAAAATAATGTGCTTTTTCCATCATGGTGTTGTTATTCTGTTGATTAGGTATGTGGGTTTGCTTTTTCTTACACGTTCAGTGAAGGTTTCTGATGAAGATTTTAACTTTCGGGATTTTGTTTGGTGGGTTTGTTTTGGGGGAGAGTTTTGTTGCTGGTTCGTGGGTTCTTTCTTGTTTAGGCTTTCATCGTTCGCATAGGGTGGGGAGAAGTGGGAATCCTTTTTTCATTTGCTCATGTTTGATAGACTGTGCATAGTGGATGAACCATTATGTGATGTCGATGAGTTTGTGGATAGCACACAATCTCCTAATGGAAGAATAGGGTTTATTTTTGTTGTATGTTTCTATTCATTTTTCAGATGTGTGATCTAATCTTCAGTGAAACTTGTAATATGACTCAGTTCTTTATGGTTTTGCCTTATAGTCATCCACTGTAAAAGATAATTAGCTTGTCTTTCTGTTTGTTGTAGTATTTTAGGGAAAAAAAAATTGCTTTGTTTTTCTTCCCAAGGCTCTTTTAGAAAGATGAAAAATGAAAAGATGTGTTTCTTCTAAGTAAGGTACTTCAGATATCCATTTAGGCATTGATGTCATAATTAAGGTATCCGTGTTACACTCTTTAGTTAAGCCACACTTTTTGGTGTTTCACCATTGATAATGGTATTGAATGTTTTACTGACAGTCAATTTTTAGCTTTTTCTGCATTTGTTTAATAAATTTTGGGTACATGAGTTTAACAGCTGAAAGTTTGCAAATGCTGTTGCATTTGAGTCATTGGTTTAGATAATCTTTTATCTCCTCTATTGTCAAAAGGGTCAATAATATAGAAGAAAATTTGGATGTTACTATCTTGGGGATCAATTGATGTCATATAGATTTGGATGGAGCATTGAATTAACATAAAATTGTGCCAACTCTGTGACAGTGGGCCTCTGCAGTACCAGTCTTCTGCAAAATGATTTCATTGTTTGAGTATCAAGAGAGATCAAAGA


Gene Sequence:
>Vu_17720(-)
ATGGTTCGCCAAACTGATTTAGTTATCATTGGTGTTTCTGCTGGTTTGGCACTTGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGGTGGTGCAAGAAACGTTCTGCTCATCGTAGACTATCTGCAAATGAGTCTAGTGTCACAACTCTTCCAATACGAACAAATGGGTTGGGAACAAGTACCGACTTTAGTGCATCACTCAATAGTTCCATAGCCACATCAAGGTCAGAAAATATCAAGAAAAGCTCCCATTTCAATTGGTGGAGTCATCAAAACAAAGATCGGTTTGCTTCGGCATCAGGCATTCTAAAGTATTCATACAAGTATGCACATTTCTCTCTTAAGCATGAAGTTAAGTCTTTTTTTTTATCTAATTGTTCTGTATATGGATAACTACTATTAAATTTGAAACATATAACTATAGATATCAAAATGTGTTCAGTATTTGATTTGTTGCATCTTGAAGTTTATATATCTTTTTATCCGGAATTTTCTTCATGAACTGCCTTGCAAGTTTTACCTTAGTTCAGAAAACAAAGAAAAAGGAGAAAGAATGGAAATTGAGATGTAAAGTAATTACTGATAAAAATACTATTAGAGGGATATTAATTAATATTGTAATGGTATGAACCTTACACTTTACATGATGCAGAGAAATTCAAAAGTCCACACAAAATTTCACAACAACCTTGGGACAAGGATCATTTGGGACAGTTTATAAAGCGACAATGCCTACAGGGGAGGTTGTAGCAGTGAAGGTGCTTGCACCCAATTCTAAACAAGGGGAGAAAGAATTCCATACAGAGGTATATTTTGTTACTTGGTTTGTGGGGTGCAGAATTTTGTATTTTTTGAATCTTTATGATCTGTATAGTACTAGAAAAAGGTTACATAATTATCTTATACGTTTTCTCCTGAGCCATTTGTTTTTCTTTCCTTCGATTCAGACGCTCATAAACACATTAAAGTTTGAAGGTATTAAACCGTTGCAAAGTTCATAGATGATTTTATACTTATTTATTTGACTTGTATTGAAGTGATTAATAATCTAGCTGGTGGTGATTGTCCTTGCTTTTGCTTTTGCTTTTGCTTTTGCTTCAATTACCCCTCATATTAAAGAGTTTATTTAATTCAGAAAATCAGTATCTGCAGAAAATGTAGTGATTCTCTTCCTCAAACATTTCTGTACTTAAAAACAAAAAGATGAAACAGTAAAACTTGTTTGATAAGGTTAAATTTTGAAAACTGTTTTCAAACTAACACATCTTTCATAATTGAAAGAAGATCTGAACGTCTCTTCGGAGTTGTTTTGGTTTTCTACTTTAAGTTTTCTGTTGCATTCTTCTTGGCATCGTTTTATCTTCTCCCACTTTTACTCTAAAATTTGAAATTTTTTTTTATAAATGTTTTTTAAGCACTAGAAAACTTAGCACACAATTCAAACCCATACAATTGTATTCCCGTTTCATCAAATTCTGTTGGAACATTACCACATGAATGACTTTAAAATTTAGAATTGTTATTTTGGTTTTTGTAGTGTGGTTATCATCATTGGAAATGAAAGCCTGCAGTGGTTGTTCAATTTTCAAGACTGAATATATCACAATTTAAAATGGATAGGGAAGATCACTTCTGCAAGTTTATATCCTATATATAATTCATGATATTGGTTCTAATTTGAGCAATTCAGGATAAACTGATATATTATAACATCATCCATCAGTTAAGTTTGTTGAAGTTTAATATTTAACGTATTGCTTCAGGTATTTCTGCTAGGAAGACTGCATCACCGAAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGGCAACGCATACTGGTTTATCAGTATATGAGTAATGGAAGTTTAGCAAATCTTATATATGGTAAGAAGAAGGTCTTTGTTCTTCATCTGTTTTTATTTAAATTTTTAAATGAATGTTGTTTATCGAGTATGTATATAATTACGTGTCTTACTTCTTTTGCATTATTTTAGTTGTCACATGACAAACTAAGTTGTCTCAATTGAGAATAGTCTGCAAATGTTTCTAGGTGAAGAAAAGGGATTGAGTTGGGATGAAAGGCTGCAAATTGTTCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGTATGTATTTTCATTGATGTATTTTTTTCTTATGTATGTGAAAATGTGTTGCTGAATATGAATATGCATGGAACAGGCAATTCCACCTGTCATACATCGCGATTTAAAGTCTGCCAACATATTGCTAGATCACTCAATGAGAGCTAAGGTAATATTGTTGTATATGCTCTTTTTAATAGTCAAATTCCCTTTCATTTTTCTAAGTTTTCATAAGATATAGAATCAAACAGTGATATCCTTCCTTGGTTATGTTGTTATTGTTGATAAAAAAGAAATTAGTGCATGACTACAAAATCAGAGAGAAGTGCTTATATGGTGACTAAATGATAGAAATTCAAGGAGCTTAGGTGGCATTTCAAAAGCTTGTGTGTATATATATCATAACAGATAATATTCTATCCAAATATAAATTTGACATTTATGGCATTGATAATATTCTATCCAAATATAAATAAATTATGCTGAAAATTGTACTGTGCAGGTTGCTGATTTTGGACTCTCAAAAGAAGAGATCTTTGATGGCAGGAATTCTGGTCTGAAAGGTACATATGGCTACATGGATCCTGCATACATTTCCACAAGCAAGTTAACAACTCAGAGTGACATATACAGTTTTGGTATCATAGTTTTTGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAGTATGTCAACCTTGTAAGTTATTTTTCTTTGAAAAAGATCTTCTTCTTCTTAGACTTCAAAATTTCTGTCTCATTTTCTTGTTTATCTTGCAAGGCTGCAATGGATCATGATGGTATAGATGAGATACTTGACAAGAAACTAGTGGGAAAATGCAATCTTGAAGAAGTGAGGCAACTTGCTAAGATTGGACACAAATGCCTGCACAAATCACCTAAGAAACGTCCCTCCATAGGTGAGGTTTCTCAGTTCATATCAAGAATAAAGCAACGGCGTCAGCGCCGTCTGACAGAAGATAACTTGTCATTTGCAAGCAACAACTTTTCTCGAGCTGTGAGTCGATTAGAAGATCGACAGGTTGAACTTAGCAGGATGTCAACGATTAGCCTAACAGAAACTCTATGA