Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17678 LG4 38868801 38871499 interleukin-1 receptor-associated kinase 4
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 38868830 3_prime_UTR_variant
G/A 38868846 3_prime_UTR_variant
C/G 38868847 3_prime_UTR_variant
A/G 38868848 3_prime_UTR_variant
A/C 38868886 3_prime_UTR_variant
C/A 38868954 3_prime_UTR_variant
T/A 38868978 3_prime_UTR_variant
T/C 38869081 synonymous_variant p.Gly801Gly
A/T 38869091 missense_variant p.Leu798His
T/C 38869104 missense_variant p.Ile794Val
G/A 38869105 synonymous_variant p.Ala793Ala
G/T 38869106 missense_variant p.Ala793Asp
G/A 38869120 synonymous_variant p.Gly788Gly
G/C 38869140 missense_variant p.Gln782Glu
C/A 38869198 synonymous_variant p.Gly762Gly
G/A 38869252 synonymous_variant p.Pro744Pro
C/T 38869265 missense_variant p.Gly740Glu
T/C 38869267 synonymous_variant p.Lys739Lys
C/T 38869284 missense_variant p.Val734Met
G/A 38869309 synonymous_variant p.Cys725Cys
G/T 38869321 synonymous_variant p.Ala721Ala
G/C,A 38869330 synonymous_variant p.Ala718Ala
T/C 38869333 synonymous_variant p.Leu717Leu
A/G 38869363 synonymous_variant p.Ile707Ile
C/A 38869366 synonymous_variant p.Leu706Leu
G/A 38869378 synonymous_variant p.Ala702Ala
T/C 38869387 synonymous_variant p.Val699Val
T/C 38869426 synonymous_variant p.Lys686Lys
T/C 38869486 synonymous_variant p.Val666Val
A/G 38869490 missense_variant p.Val665Ala
A/C 38869506 missense_variant p.Ser660Ala
T/C 38869532 missense_variant p.Lys651Arg
C/T 38869537 synonymous_variant p.Leu649Leu
C/T 38869540 synonymous_variant p.Gly648Gly
T/C 38869568 missense_variant p.Lys639Arg
G/C 38869621 missense_variant p.Asn621Lys
G/C 38869631 missense_variant p.Thr618Ser
T/C 38869648 synonymous_variant p.Gly612Gly
C/G 38869654 synonymous_variant p.Ala610Ala
G/A 38869658 missense_variant p.Ala609Val
C/T 38869665 missense_variant p.Val607Ile
C/T 38869690 synonymous_variant p.Ser598Ser
G/A 38869708 synonymous_variant p.Thr592Thr
T/G 38869723 missense_variant p.Glu587Asp
A/G 38869726 synonymous_variant p.Arg586Arg
G/A 38869740 missense_variant p.Arg582Cys
T/C 38869743 missense_variant p.Arg581Gly
A/G 38869771 synonymous_variant p.Asn571Asn
G/C 38869803 missense_variant p.Leu561Val
A/G 38869858 synonymous_variant p.Ala542Ala
G/A 38869897 synonymous_variant p.Val529Val
C/G 38869903 synonymous_variant p.Val527Val
T/A 38869922 missense_variant p.Tyr521Phe
A/G 38869930 synonymous_variant p.Tyr518Tyr
T/C 38869933 synonymous_variant p.Val517Val
T/A 38869948 synonymous_variant p.Gly512Gly
T/G 38869962 missense_variant p.Ile508Leu
A/G 38869972 synonymous_variant p.Asn504Asn
T/C 38869974 missense_variant p.Asn504Asp
G/A 38869990 synonymous_variant p.Ala498Ala
T/G 38870005 synonymous_variant p.Leu493Leu
A/G 38870008 synonymous_variant p.Ser492Ser
T/C 38870014 synonymous_variant p.Arg490Arg
G/A 38870017 synonymous_variant p.Arg489Arg
T/C 38870023 synonymous_variant p.Gln487Gln
C/T 38870027 missense_variant p.Gly486Asp
G/C 38870037 missense_variant p.Leu483Val
A/G 38870044 synonymous_variant p.Asn480Asn
G/C 38870047 missense_variant p.His479Gln
T/C 38870048 missense_variant p.His479Arg
T/A 38870050 synonymous_variant p.Arg478Arg
C/G 38870053 missense_variant p.Lys477Asn
T/G 38870054 missense_variant p.Lys477Thr
A/G 38870072 missense_variant p.Leu471Ser
G/A 38870081 missense_variant p.Pro468Leu
T/G 38870101 synonymous_variant p.Thr461Thr
A/G 38870108 missense_variant p.Leu459Ser
C/A 38870111 missense_variant p.Arg458Leu
G/C 38870124 missense_variant p.Leu454Val
G/T 38870125 synonymous_variant p.Val453Val
A/G 38870132 missense_variant p.Leu451Ser
G/A 38870237 missense_variant p.Pro416Leu
A/G 38870276 missense_variant p.Ile403Thr
A/G 38870284 synonymous_variant p.Ile400Ile
G/T 38870312 stop_gained p.Ser391*
A/G 38870313 missense_variant p.Ser391Pro
C/T 38870330 missense_variant p.Ser385Asn
G/C 38870343 missense_variant p.Pro381Ala
A/G 38870348 missense_variant p.Met379Thr
T/A 38870366 missense_variant p.Tyr373Phe
T/C 38870382 missense_variant p.Ser368Gly
C/A 38870444 missense_variant p.Trp347Leu
A/G 38870446 synonymous_variant p.Val346Val
C/G 38870483 missense_variant p.Gly334Ala
C/T 38870501 missense_variant p.Arg328Gln
G/T 38870502 synonymous_variant p.Arg328Arg
C/T 38870503 synonymous_variant p.Arg327Arg
G/A 38870512 synonymous_variant p.Ile324Ile
G/T 38870515 missense_variant p.Asn323Lys
T/G 38870525 missense_variant p.Asn320Thr
G/A 38870554 synonymous_variant p.Leu310Leu
T/A 38870601 missense_variant p.Asn295Tyr
T/A 38870607 missense_variant p.Met293Leu
G/A 38870618 missense_variant p.Thr289Ile
C/T 38870636 missense_variant p.Ser283Asn
C/A 38870641 synonymous_variant p.Ala281Ala
A/G 38870692 synonymous_variant p.Asn264Asn
T/A 38870775 missense_variant p.Asn237Tyr
G/A 38870869 synonymous_variant p.Phe205Phe
A/G 38870983 synonymous_variant p.His167His
A/C 38870986 synonymous_variant p.Thr166Thr
T/A 38870988 missense_variant p.Thr166Ser
T/A 38870992 synonymous_variant p.Thr164Thr
A/G 38871016 synonymous_variant p.Asp156Asp
C/A 38871087 missense_variant p.Ala133Ser
G/T 38871133 missense_variant p.Phe117Leu
G/A 38871143 missense_variant p.Thr114Ile
G/A 38871160 synonymous_variant p.Tyr108Tyr
G/A 38871175 synonymous_variant p.Phe103Phe
A/G 38871259 synonymous_variant p.Tyr75Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17678.1
MRSNAVIFFLLHLFSHLQAYTLVDNFTISCGSSGTSYDGQRTWTGDIGSPLLTNEYDTVSAKATTQSPSINQVPYATARLSHSEFSYSFYFSTGGPKFLRLFFFPASYPSYSRTQAFFSVHSNQFILLQDFNASLNADAQAIDTIFREYVVNVQDDESLFLTFTPTHPNSYAFINGIEVLSMPTYLYYTPLDDMGFTLVGHDRQFSVRSSTAMETVYRIKTGGQEISPKNDTGLFRNWADEKSYFIKHSPRNDDLPADMDGKMNITVNPDYLAPKELFRTARSMGTNATLNRMSNLTWEFPVDYGFTYVLRLHFCELDPNINNIGDRRFSIYIGSQLADSRADVMVWSQKQKGLAVQKNYAFLIPENSVQKKYNLSLQMHPYGSSVYSRYSDAFLNGLEIFKISDTRSNNLAGPNPEPIETSHQKENRRSRSKNLIIGNTVKVVSGVVFILLVLFFIRLLTTSKWSAPLFLTTKSTKRHNFSLPSGQCRRFSLVEIKAATKNFNNVLIVGDGGFGHVYKGYIDDGSVPVAIKRLRQGSQQGASEFVNEIQMLSQLRHRHLLSLIGYCCDNNEMILVYEFMRRGNLREHLYGTDNPPLSWKQRLKICVGAARGLRYLHTGANHMIIHRDVKTTNILLDEKWVAKVSDFGLSKIGPNEMSKSHVSTVVKGSFGYLDPEYYIRRRLTEKSDVYSFGVVLFEVLCARSPLIHTEEIEQVSLANWARYCCQNGTVTEIVDPILKGKIAPDCLAKFCEIGVSCLSQEGMQRPSMNDVVLMLESALKLQESADQGATQEAIDHVLDLGEHHNSCKDNDKLMLDLFSEIVDLEPR*


CDS Sequence:
>Vu_17678.1
ATGAGGTCCAACGCAGTCATCTTCTTCCTTCTCCACCTCTTCTCACACCTCCAAGCGTACACCCTAGTGGACAATTTCACCATCAGTTGCGGTTCCTCCGGAACATCCTACGACGGCCAAAGGACATGGACCGGGGACATAGGTTCACCGCTCTTAACAAACGAATACGACACCGTTTCAGCCAAAGCCACAACGCAATCTCCTTCGATCAACCAAGTTCCCTATGCCACAGCTCGCCTTTCTCATTCCGAATTCAGTTACTCCTTCTATTTCTCAACCGGAGGTCCAAAATTTCTTCGCCTCTTCTTCTTTCCAGCTTCTTACCCTTCATATTCACGCACCCAGGCATTCTTCTCTGTTCACTCCAATCAATTCATTCTCCTCCAAGATTTCAACGCCTCTCTCAACGCCGACGCTCAAGCCATCGACACTATCTTCAGAGAATACGTGGTCAACGTCCAAGACGATGAGAGTCTTTTCCTCACCTTCACACCCACTCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCTATTTATATTACACGCCACTAGATGATATGGGATTCACGCTGGTGGGACATGATAGGCAATTCAGCGTCCGAAGTAGCACTGCCATGGAAACAGTGTATCGTATTAAAACCGGGGGCCAGGAAATCTCTCCAAAAAACGACACCGGTTTGTTCAGGAATTGGGCTGACGAGAAAAGTTATTTTATCAAACACAGTCCAAGGAATGATGATCTACCAGCTGACATGGATGGGAAAATGAATATAACCGTGAATCCCGATTACTTGGCACCAAAGGAACTGTTCAGAACAGCGCGTAGCATGGGCACAAACGCCACTCTGAACAGAATGAGCAACCTCACTTGGGAGTTCCCCGTTGATTATGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGATCCCAATATTAATAACATCGGTGACAGGCGATTCTCCATTTACATAGGGAGTCAGTTGGCTGATTCGCGTGCAGATGTAATGGTTTGGAGTCAGAAACAAAAAGGTCTAGCTGTGCAGAAAAACTATGCCTTTTTGATTCCCGAGAATAGTGTTCAGAAAAAGTATAATCTCTCGCTTCAAATGCACCCTTACGGAAGCAGTGTGTATTCGAGATACTCAGATGCCTTCCTGAACGGTCTAGAGATTTTCAAAATCAGCGACACTAGGTCTAACAACCTCGCCGGACCTAACCCGGAGCCGATTGAGACATCACATCAAAAGGAAAATAGAAGAAGCAGAAGCAAAAACCTGATAATTGGTAACACGGTGAAGGTAGTTTCCGGTGTCGTTTTCATCTTGCTTGTCCTTTTCTTTATCCGGTTGTTGACAACTTCCAAGTGGAGTGCACCGTTGTTCTTAACGACCAAGTCAACCAAGCGACACAATTTTTCTCTGCCTTCTGGTCAATGCCGCCGATTTTCTCTAGTCGAGATCAAAGCCGCCACCAAAAACTTCAATAACGTCCTTATCGTCGGCGACGGAGGATTTGGACACGTATATAAGGGCTACATCGACGACGGCTCAGTGCCCGTCGCTATCAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTAGCGAGTTCGTTAACGAGATCCAGATGCTCTCGCAACTCCGCCACCGCCATCTCCTCTCACTCATCGGTTACTGCTGCGATAACAATGAGATGATCCTCGTTTACGAGTTCATGAGACGTGGAAACCTCCGTGAACATCTCTACGGCACCGATAACCCCCCTCTCTCGTGGAAGCAGCGGTTGAAGATTTGCGTTGGCGCTGCGCGCGGACTACGCTATCTTCACACTGGCGCGAACCACATGATCATCCACCGTGACGTGAAAACGACGAACATCTTGTTGGATGAGAAATGGGTGGCGAAGGTTTCGGATTTCGGGCTGTCCAAAATTGGGCCGAATGAGATGTCGAAGTCCCATGTGAGCACCGTCGTAAAAGGCAGCTTTGGGTATTTGGATCCGGAATATTACATTCGACGGCGGCTGACGGAGAAATCTGACGTGTATTCTTTTGGGGTGGTGTTGTTTGAGGTACTCTGTGCCCGTTCTCCTCTGATTCATACTGAAGAAATCGAACAGGTGTCACTAGCCAATTGGGCCAGATATTGTTGCCAAAATGGGACAGTGACGGAGATTGTGGACCCCATATTGAAAGGGAAGATCGCTCCCGATTGTTTGGCCAAGTTTTGTGAGATTGGGGTGAGTTGTTTATCACAAGAGGGGATGCAGAGGCCTTCCATGAACGATGTCGTTTTGATGTTAGAGTCTGCACTGAAACTGCAAGAGAGTGCCGACCAAGGCGCAACACAGGAAGCCATTGACCATGTGCTTGATCTTGGAGAGCACCACAATAGTTGCAAGGATAATGATAAGTTGATGTTGGATCTTTTTTCTGAGATTGTCGACCTAGAGCCACGTTGA


Promoter Sequence:
>Vu_17678::LG4:38871499-38873499(-)
CTCTTGGTTGAATATTTAGTGAAGAGTTATCACTCTTGAATGTTTGGGTGTTATGAAGGGTGAGTTTAACGTAAGTGGAATGTACCTGGCTTTCGACCCCGGCTTTGTTTTTATAATTTACCTCATGGATCCTGAGCTGATACAAGCCCAATAAAATATAAACAGAATAAGATATAAACAGATTACCTGAAAATCCGGTTGGTTGTTTATAACCTGCTTATCAATATCTTTAATTAAATATTCTTTGATTATTTTATCATCTGTTGGAATATTGGCCTAACAATAGCTTAAGCACTGGCCCAATTACAGCCCAATCTTTGATTTGAGTGGATGGACCGAACGGTGCTGAATGTTAACCGTTCGGTCTCCAGTGGGTACGATACATGATCTAATACTTTTGTTATGGAATGTACATTAATATCATATCTTTTATTTTAAAATTATTCAACATTAAAAAATATTTTTATTTAAAATAATATATAAATTGAGATAAACAATGTAAAAATCACTAGTGCAGAATTAACGTTTGACATCACCCGTTAGACGTCGGATCACTCTGTATCCAACGTAAATTATTGGCTGGTGGCATTTTCGTAAATAACTGGCCATACAAACGTCCGTTGGGAGGGGGGCACCGACGTCTATAATATTATAGACGTCGGTGCCCCTCCTAACGGACGTTTGGATGATTGACAGGTAGGTGAAATGTCATTTCTTTTCGCCATATAGACGTTTATTGGTAGGGGCACCGACGTCTATAATATTATAGACGTCGGTGCCCCTACCAACGGACGTCTGGATGATTGACAGGTAGGTGAAAAAGTCATTTCTTTTCGCCATATAGACTTTTGATCCCGCCTCCCTGATGTCTATATTCAATTATAGACGTCTGATCCCTACCATGAATATTAATTTTTCAATCGAATGGACGTAACATTAGTGAGGTCCCCGACGTAAATTCGAGCGTAGACGGCGGTCTCTTGGGGAACTGACGTTTGGATCGCTATTAAATAAGCCATTGCGAACCAGCAGTTATACGCGAAGTTCATTGTCTTCCTTCCTTCGCTCATTGCATTTCCAGGTGCGTTTTTGATCTATTTTTAACCGTTTAAACTCACTTTACTCCGATTAAAGTAATATTTGATGTATTATCTTTCGTTTGAACTAATTAAAATGAGTTTTCGTTGTGTTTTGGTGTAGTTATTCCGTGTCTTTTGGGTAGCATAGTGCACCTTCCCTTTGCTAGCTTCCTCATAAGAAAAGCTTATGTTTTTTGAATCTCTTATGGCATTTCAACCTAAGGCTGAACCTGGGTCCTTGCCTAGTTTTCATGTCACCGTATTTTTTTTCTTGGCGGTTGGAATGAATATAGGCAACGATCTAGGCTCGGTTTTGGGTTGAAATGTCATAAGAGGTCCAAAAACCACAATTTTTTCTTACGAAGAAGCTAGTAAAGGGCGGAAGTCTATTATGCTACCCAAAAACACGAGCAAAACTGCATTAAAACACAACGATATCTCAGTAGACGTCAGTTATGACCGACATCTATAGTGCCATTAGACGTCGGTGAGTTTCATGTCGGACGTTTTTATAGTGCTTTAGATGTCGGTTAGTGTCGCGTCGGTTAGTGTCGTGTCTGACGTCTTTACAACATCATTAGATGTCAGTTATGGTTATAACAAACGTTTATAAAGACGTCGGATGTTTCACATAGCAACGTCCCATTAACGTCACCCACAAAGGCGTCGGTTAGAGATATGACATTAAAAATCCAAAATAACATACGTCTAAAGCCTTTTCTGCACTAGTGAATATTAACTTTTTATTAAATATTAAAAAATGTAAAAGAAAAATTGAAAAATATCTTATTATAGTTTTTCTTTTATTACAACATGTGGTCGGTAGCAGTGGAGTAGTCATCTTTCACTTTGAACTTTCTTTCAGGCGGGCATCGAAGCAAGTGCAAGTTATAAAGGATGATAATATGTCTTAGTTCTGTC


Gene Sequence:
>Vu_17678(-)
ATTCTCACGGCAAACCATGAGGTCCAACGCAGTCATCTTCTTCCTTCTCCACCTCTTCTCACACCTCCAAGCGTACACCCTAGTGGACAATTTCACCATCAGTTGCGGTTCCTCCGGAACATCCTACGACGGCCAAAGGACATGGACCGGGGACATAGGTTCACCGCTCTTAACAAACGAATACGACACCGTTTCAGCCAAAGCCACAACGCAATCTCCTTCGATCAACCAAGTTCCCTATGCCACAGCTCGCCTTTCTCATTCCGAATTCAGTTACTCCTTCTATTTCTCAACCGGAGGTCCAAAATTTCTTCGCCTCTTCTTCTTTCCAGCTTCTTACCCTTCATATTCACGCACCCAGGCATTCTTCTCTGTTCACTCCAATCAATTCATTCTCCTCCAAGATTTCAACGCCTCTCTCAACGCCGACGCTCAAGCCATCGACACTATCTTCAGAGAATACGTGGTCAACGTCCAAGACGATGAGAGTCTTTTCCTCACCTTCACACCCACTCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCTATTTATATTACACGCCACTAGATGATATGGGATTCACGCTGGTGGGACATGATAGGCAATTCAGCGTCCGAAGTAGCACTGCCATGGAAACAGTGTATCGTATTAAAACCGGGGGCCAGGAAATCTCTCCAAAAAACGACACCGGTTTGTTCAGGAATTGGGCTGACGAGAAAAGTTATTTTATCAAACACAGTCCAAGGAATGATGATCTACCAGCTGACATGGATGGGAAAATGAATATAACCGTGAATCCCGATTACTTGGCACCAAAGGAACTGTTCAGAACAGCGCGTAGCATGGGCACAAACGCCACTCTGAACAGAATGAGCAACCTCACTTGGGAGTTCCCCGTTGATTATGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGATCCCAATATTAATAACATCGGTGACAGGCGATTCTCCATTTACATAGGGAGTCAGTTGGCTGATTCGCGTGCAGATGTAATGGTTTGGAGTCAGAAACAAAAAGGTCTAGCTGTGCAGAAAAACTATGCCTTTTTGATTCCCGAGAATAGTGTTCAGAAAAAGTATAATCTCTCGCTTCAAATGCACCCTTACGGAAGCAGTGTGTATTCGAGATACTCAGATGCCTTCCTGAACGGTCTAGAGATTTTCAAAATCAGCGACACTAGGTCTAACAACCTCGCCGGACCTAACCCGGAGCCGATTGAGACATCACATCAAAAGGAAAATAGAAGAAGCAGAAGCAAAAACCTGATAATTGGTAACACGGTGAAGGTAGTTTCCGGTGTCGTTTTCATCTTGCTTGTCCTTTTCTTTATCCGGTTGTTGACAACTTCCAAGTGGAGTGCACCGTTGTTCTTAACGACCAAGTCAACCAAGCGACACAATTTTTCTCTGCCTTCTGGTCAATGCCGCCGATTTTCTCTAGTCGAGATCAAAGCCGCCACCAAAAACTTCAATAACGTCCTTATCGTCGGCGACGGAGGATTTGGACACGTATATAAGGGCTACATCGACGACGGCTCAGTGCCCGTCGCTATCAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTAGCGAGTTCGTTAACGAGATCCAGATGCTCTCGCAACTCCGCCACCGCCATCTCCTCTCACTCATCGGTTACTGCTGCGATAACAATGAGATGATCCTCGTTTACGAGTTCATGAGACGTGGAAACCTCCGTGAACATCTCTACGGCACCGATAACCCCCCTCTCTCGTGGAAGCAGCGGTTGAAGATTTGCGTTGGCGCTGCGCGCGGACTACGCTATCTTCACACTGGCGCGAACCACATGATCATCCACCGTGACGTGAAAACGACGAACATCTTGTTGGATGAGAAATGGGTGGCGAAGGTTTCGGATTTCGGGCTGTCCAAAATTGGGCCGAATGAGATGTCGAAGTCCCATGTGAGCACCGTCGTAAAAGGCAGCTTTGGGTATTTGGATCCGGAATATTACATTCGACGGCGGCTGACGGAGAAATCTGACGTGTATTCTTTTGGGGTGGTGTTGTTTGAGGTACTCTGTGCCCGTTCTCCTCTGATTCATACTGAAGAAATCGAACAGGTGTCACTAGCCAATTGGGCCAGATATTGTTGCCAAAATGGGACAGTGACGGAGATTGTGGACCCCATATTGAAAGGGAAGATCGCTCCCGATTGTTTGGCCAAGTTTTGTGAGATTGGGGTGAGTTGTTTATCACAAGAGGGGATGCAGAGGCCTTCCATGAACGATGTCGTTTTGATGTTAGAGTCTGCACTGAAACTGCAAGAGAGTGCCGACCAAGGCGCAACACAGGAAGCCATTGACCATGTGCTTGATCTTGGAGAGCACCACAATAGTTGCAAGGATAATGATAAGTTGATGTTGGATCTTTTTTCTGAGATTGTCGACCTAGAGCCACGTTGAAGTTACCAGTAAAACATGAAAAGGTTTGCTTAAACAGTTACATTTGAAGACCTAATATTATCTGGATACTCCAAATTTATGTATTCAGTTTCGTGGTTGTAGTGTTAAAGTAGTGTTATCTCTCTATATCAATCAGGCTTCTTCTATTTCCTGCTAATGTAAGAAGACACGTTTACTGGTAAATTTCCTATTATACACC