Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17675 LG4 38837757 38840745 PREDICTED: receptor-like protein kinase FERONIA
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 38837804 3_prime_UTR_variant
A/C 38837811 3_prime_UTR_variant
T/C 38837812 3_prime_UTR_variant
C/T 38837816 3_prime_UTR_variant
T/A 38837817 3_prime_UTR_variant
T/A 38837818 3_prime_UTR_variant
A/C 38837823 3_prime_UTR_variant
T/C 38837842 3_prime_UTR_variant
G/C 38837867 3_prime_UTR_variant
T/C 38837886 3_prime_UTR_variant
C/G 38837888 3_prime_UTR_variant
A/G 38837908 3_prime_UTR_variant
T/A 38837919 3_prime_UTR_variant
G/C 38837924 3_prime_UTR_variant
C/T 38838856 synonymous_variant p.Ser547Ser
G/T 38838887 missense_variant p.Pro537Gln
G/A 38838895 synonymous_variant p.Gly534Gly
C/T 38838990 missense_variant p.Gly503Arg
A/G 38838993 missense_variant p.Phe502Leu
G/C 38839090 missense_variant p.Ile469Met
T/C 38839092 missense_variant p.Ile469Val
G/C 38839095 missense_variant p.His468Asp
T/G 38839135 synonymous_variant p.Val454Val
A/C 38839141 synonymous_variant p.Gly452Gly
T/C 38839215 missense_variant p.Asn428Asp
G/T 38839282 synonymous_variant p.Leu405Leu
G/C 38839291 synonymous_variant p.Leu402Leu
G/A,* 38839300 synonymous_variant p.Asp399Asp
C/G 38839312 synonymous_variant p.Thr395Thr
T/A 38839314 missense_variant p.Thr395Ser
C/A 38839317 missense_variant p.Asp394Tyr
G/A 38839321 synonymous_variant p.Ser392Ser
C/T 38839322 missense_variant p.Ser392Asn
T/C 38839328 missense_variant p.Glu390Gly
G/A 38839336 synonymous_variant p.His387His
A/G 38839345 synonymous_variant p.Leu384Leu
C/A,G 38839370 missense_variant p.Ser376Ile
T/C 38839371 missense_variant p.Ser376Gly
C/T 38839373 missense_variant p.Gly375Asp
G/C 38839378 missense_variant p.Asn373Lys
T/C 38839380 missense_variant p.Asn373Asp
T/C 38839387 synonymous_variant p.Leu370Leu
C/T 38839392 missense_variant p.Val369Ile
G/A 38839393 synonymous_variant p.Ala368Ala
G/A 38839396 synonymous_variant p.Tyr367Tyr
C/T 38839403 missense_variant p.Arg365Lys
T/A 38839405 missense_variant p.Gln364His
A/G 38839416 synonymous_variant p.Leu361Leu
T/C 38839487 missense_variant p.Tyr337Cys
A/G 38839488 missense_variant p.Tyr337His
C/T 38839508 missense_variant p.Gly330Asp
A/G 38839513 synonymous_variant p.Ile328Ile
C/T,G 38839518 missense_variant p.Asp327His
G/A 38839519 synonymous_variant p.Pro326Pro
A/G 38839534 synonymous_variant p.Phe321Phe
G/A 38839537 synonymous_variant p.His320His
T/C 38839548 missense_variant p.Ile317Val
C/T 38839565 missense_variant p.Cys311Tyr
T/A 38839580 missense_variant p.Glu306Val
C/G 38839595 missense_variant p.Ser301Thr
T/A 38839596 missense_variant p.Ser301Cys
C/T 38839601 missense_variant p.Arg299Lys
G/A 38839603 synonymous_variant p.Asn298Asn
G/C 38839619 missense_variant p.Thr293Arg
T/C 38839641 missense_variant p.Arg286Gly
C/G 38839660 missense_variant p.Leu279Phe
A/C 38839662 missense_variant p.Leu279Val
C/G 38839698 missense_variant p.Asp267His
G/C 38839706 missense_variant p.Ala264Gly
C/G 38839707 missense_variant p.Ala264Pro
C/A 38839723 missense_variant p.Arg258Ser
C/T 38839724 missense_variant p.Arg258Lys
T/C 38839726 synonymous_variant p.Pro257Pro
T/C 38839733 missense_variant p.His255Arg
G/C 38839734 missense_variant p.His255Asp
A/G 38839744 synonymous_variant p.Tyr251Tyr
G/A 38839747 synonymous_variant p.Arg250Arg
G/A 38839771 synonymous_variant p.Phe242Phe
T/G 38839922 missense_variant p.Asp192Ala
G/C 38840050 synonymous_variant p.Thr149Thr
G/A 38840062 synonymous_variant p.Asp145Asp
A/G 38840065 synonymous_variant p.Ala144Ala
A/G 38840083 synonymous_variant p.Phe138Phe
T/A 38840113 missense_variant p.Gln128His
C/A 38840138 missense_variant p.Arg120Leu
A/C 38840160 missense_variant p.Ser113Ala
G/C 38840181 missense_variant p.Leu106Val
G/T 38840190 missense_variant p.Pro103Thr
G/A 38840191 synonymous_variant p.Gly102Gly
C/G 38840202 missense_variant p.Val99Leu
A/T 38840203 synonymous_variant p.Leu98Leu
A/G,T 38840204 missense_variant p.Leu98Pro
A/T 38840211 missense_variant p.Ser96Thr
G/T 38840229 missense_variant p.Arg90Ser
T/G 38840236 synonymous_variant p.Arg87Arg
C/T 38840256 missense_variant p.Val81Ile
T/C 38840275 synonymous_variant p.Gln74Gln
T/G 38840427 missense_variant p.Ser24Arg
G/A 38840485 synonymous_variant p.Leu4Leu
A/G 38840490 missense_variant p.Phe3Leu
C/G 38840504 5_prime_UTR_variant
T/G 38840505 5_prime_UTR_variant
C/T 38840506 5_prime_UTR_variant
G/T 38840521 5_prime_UTR_variant
C/T 38840527 5_prime_UTR_variant
C/G 38840540 5_prime_UTR_variant
A/T 38840550 5_prime_UTR_variant
G/A 38840561 5_prime_UTR_variant
G/T 38840565 5_prime_UTR_variant
A/G 38840567 5_prime_UTR_variant
G/C 38840613 5_prime_UTR_variant
G/A 38840636 5_prime_UTR_variant
G/T 38840658 5_prime_UTR_premature_start_codon_gain_variant
T/A 38840665 5_prime_UTR_premature_start_codon_gain_variant
A/G 38840678 5_prime_UTR_variant
C/T 38840684 5_prime_UTR_variant
T/A 38840728 5_prime_UTR_variant
A/T 38840729 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17675.1
MMFLPFTFTFLKLFFLLLLHFSTSLQAYTSEEVFTINCGTTGNSSDGQRTWTGDIDTKYLSSQDSTVSDKASTQSPSTNQVPFSTARLSRSQFNYSFLVSPGPKFLRLFFYPSDYSSFLRTHASFSVQSNQFTLLHAFNASLNADAQATDTIFREYVVNVKDGESLILTFTPSHPNSYAFINGIEVLSMPTDLYYTPLDDPGFTLVGHDTLFSVGSSTAMETVYRIKSGGQEISPQNDTGLFRNWASEERYFIKHNPRNDDLPADMDGKMNITVNPDYLAPKELFRTARNMGTNATLNRMSNLTWEFPVDCGFTYVIRLHFCELDPDINGIGDRQFYIYIASQVADDRADVMKWSQKQKGLAVQRNYAVLIPNNGSQKKFNLSLQMHPYESSVDTRYSDAFLNGLEIFKTNVNNLAGPEPDPLQTPHNIIPGKTSSGNGKTRIFVVAGVGIGVVFISLVILFVVVSRHIRTTETNPKEYKSKLFTATQKASLPSDLCRHFSFGEIEAATNNFDDVFIVGVGGFGHVYKGYIDGGFTPVAIKRLKPGSQQGAHEFLNEIEMLSQLRHLHLVSLIGYCNEMNEMILVYDFMARGTLRDHLYNTDNPAILWKQRLRICIGAARGLHYLHTGGKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGTDKSHVSTHVKGSFGYIDPEYYKRFRLTEKSDVYSFGVVLFEILCGRPALIHSAETQQVSLSNWVRHCDQNGTIPEIVDPTLKKKIAPECLKTFCQIGMSCLLEDGTKRPSMKDVVAMLEFTLRLQESAEQHSSEKGEEISADSFSTTDMYVTTTTTTSEDNNYSNNTVSSWTPFSEIMDPKPR*


CDS Sequence:
>Vu_17675.1
ATGATGTTCCTCCCTTTCACTTTCACCTTCTTAAAACTCTTCTTCCTCCTCCTACTACACTTCTCCACAAGCCTCCAAGCCTACACCTCAGAGGAAGTTTTCACCATCAATTGCGGCACCACCGGAAACTCCTCCGACGGTCAAAGAACCTGGACCGGCGACATCGACACAAAGTACTTATCTTCCCAAGACTCCACCGTTTCAGACAAGGCCTCAACACAATCTCCTTCAACCAATCAAGTCCCCTTCTCCACTGCACGATTGTCCCGTTCCCAATTCAATTACTCCTTCCTTGTCTCCCCAGGCCCCAAATTCCTTCGCCTCTTCTTCTACCCTTCTGACTACTCTTCCTTTCTCCGCACCCACGCATCTTTCTCCGTTCAATCCAACCAATTCACTCTCCTCCACGCTTTTAACGCCTCTCTTAACGCTGACGCTCAAGCCACCGACACTATCTTCAGAGAATACGTCGTCAACGTCAAAGACGGTGAGAGTCTTATCCTTACCTTCACCCCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACTCCACTAGATGACCCAGGATTCACTCTCGTGGGACATGATACGCTATTCAGCGTCGGAAGTAGCACTGCCATGGAAACAGTTTATCGTATTAAATCCGGAGGCCAGGAAATCTCACCACAAAACGACACCGGTTTGTTCAGGAATTGGGCTTCCGAAGAACGCTATTTTATCAAACACAATCCAAGGAATGATGATCTACCAGCTGACATGGATGGGAAAATGAACATAACCGTGAATCCCGATTACTTGGCACCAAAGGAACTGTTCAGAACAGCGCGTAACATGGGCACAAACGCCACTCTGAACAGAATGAGCAACCTCACTTGGGAGTTCCCCGTTGATTGTGGCTTCACTTACGTTATCAGACTCCACTTTTGCGAGCTTGATCCCGATATTAATGGCATCGGTGACAGGCAGTTTTACATTTACATTGCGAGTCAGGTGGCTGATGATCGTGCAGATGTAATGAAATGGAGTCAGAAACAAAAAGGTTTAGCTGTGCAAAGAAACTACGCCGTTTTAATTCCCAACAATGGTAGTCAGAAAAAGTTTAATCTCTCGCTTCAAATGCACCCTTACGAAAGCAGCGTGGATACGAGATACAGCGACGCCTTCCTCAACGGTCTCGAGATCTTCAAAACCAATGTAAACAACCTTGCTGGACCCGAGCCGGACCCCCTTCAGACTCCGCACAACATCATCCCCGGAAAGACAAGCAGCGGAAATGGAAAAACTAGAATTTTTGTCGTCGCAGGGGTGGGAATCGGTGTCGTATTTATCTCTCTTGTGATTTTATTTGTTGTTGTCTCGAGACACATCAGAACCACTGAAACGAATCCCAAGGAATACAAATCCAAGTTGTTCACAGCCACACAGAAAGCTTCCCTGCCGTCCGATCTCTGCCGCCACTTCTCCTTTGGGGAGATCGAAGCCGCCACCAACAACTTCGACGACGTCTTCATCGTCGGCGTCGGAGGATTCGGTCACGTGTACAAGGGTTACATCGACGGCGGCTTCACCCCGGTAGCAATCAAGCGCCTGAAACCGGGTTCGCAGCAGGGTGCGCACGAATTCTTGAACGAGATCGAGATGCTATCGCAGCTCCGCCATCTTCATCTGGTCTCCCTAATCGGATACTGCAACGAGATGAACGAGATGATACTGGTCTACGACTTCATGGCGCGCGGCACCCTACGCGACCATCTCTACAACACGGACAACCCCGCTATCTTGTGGAAGCAGCGCTTGCGGATCTGTATCGGCGCGGCGCGAGGGCTGCACTATCTCCACACAGGCGGGAAGCACACGATCATCCACCGCGACGTGAAAACAACGAACATCTTGTTAGATGATAAGTGGGTGGCGAAGGTTTCGGACTTCGGGCTTTCAAGAATCGGGCCAACAGGCACGGACAAGTCCCACGTGAGTACCCATGTGAAGGGAAGCTTTGGCTACATAGATCCCGAGTACTACAAACGATTTCGTCTAACGGAAAAGTCTGATGTTTACTCTTTCGGGGTTGTGCTGTTTGAGATACTGTGTGGTCGTCCAGCTTTGATTCACAGTGCAGAGACGCAGCAGGTATCGCTTTCTAACTGGGTGAGACATTGTGACCAAAATGGGACCATACCAGAGATTGTGGACCCCACGTTGAAGAAGAAGATTGCACCGGAGTGCCTGAAAACGTTTTGTCAGATTGGAATGAGTTGTTTGTTGGAAGATGGGACGAAGAGGCCTTCCATGAAGGACGTGGTTGCGATGTTGGAGTTTACGCTGCGGCTACAAGAAAGTGCAGAGCAACACTCGTCTGAAAAAGGAGAGGAAATTAGTGCGGATAGCTTTTCTACTACTGACATGTATGTCACTACTACGACTACCACCAGTGAAGATAATAACTATAGTAATAATACGGTGTCGTCTTGGACTCCTTTCTCCGAAATTATGGATCCAAAGCCGCGTTGA


Promoter Sequence:
>Vu_17675::LG4:38840745-38842745(-)
GTAGCAGTGTCGAATAATATGCCATGGAGGATAAGGAAGCCTGGAAGCCGAATCAGAAGGCCCTCGATAGGAAAATGTTGAAAGGTATCTACGAAAACGTTGCTGTCTGATCGATCGAACTGGCCTGTCCCTTCATATTATGAACGGAGGATAGGGTCTTGAAGGTTTACAATTTATTTTTCACTTTTTTATTTCGAAATAGTGAGGTAGTGGATATTGTCATTACAATTTTTCTAAATATTTACAATTTAGATTTAGTCTATTTTCAAAAAATTCAACTAACACTAAATATTATTATCTTTTTTTAGCTTTTAGGTTTCCTAATTTCAAAACGTCTCACTTTTAATCTTTTAAATGATATTCATGATGCATCATAAAGTCATAAGTTAAGAGAGATAAATGTAAAAAAGTTTGAACTTTGTTTTTGCTTTGAGTTTACGTGGAAAACTTTTGAGTCTTCTATTCATACGTGATGCATAAATTCAGGTATATAATTACGCTATGATTATCGAATAGTAGTATATTCAGGCATAATAAAAAGTGAGGTATAGATTACGGTTGAATATTTTAGTGAAAAATTTGAAAAAGGAAAAGATATTTATAGTTTAAAAACTTTTTTAAATAAATATCAATTCTATTAAGGTTTTAATTAATTAAATATGTATAGATAAATTTACGAATTATTTCGTCAAATATAAATTGTTACTATCGGCTTATAACCAACCGAACGGTAAAGGTGCAGAAGAGTCGACCGATCGATGATGCCTCTCGGGTCAATGAACCGATCGGTAAAAAGAGCCGTTAAGATAATCAATAGTAATAACTGTCGGGGTGTTAATGAAAATAAATGTCATTTATTGACAATTAATATTGTCATTCATTGGTGATTAATGAGTCAGACCTAACGGTAAGCTCATTATAATTTATAAATATATTTCTGGCAAAGGAGACAGGTAACTTGAACTTGAACTGAAACTTAGAGCTCTGATAACTAAATCTTGATTACAAGATTATCACGCAAAGTCACTGACTTGAACGTCGGAGTGTCTTTTGCAGGCACCCTCCTGCGCGGCTTGGACAAGGAGAAGAGAGAAGACCACACAACTGGACATCGGAGCAGACAACTGTGAATGTTTTGGATTAGGGTTCTAAATCCTGCCGAAACATAAATTATTTTTATTTGTTTAATTTACATAATTTTCTTACATACTGCTTTGTATATTAAGTTAACATGAAATTACCTACCAGTTATAAATTTAACTTTAAAATTTACAACAAATTTATTTATGAGCTTAAGATTTGTAGAAAGCATACCTGCACATCTAAAAGTTTGGAAAAAGGATATTGTACATTTTGAACAAAATATTTCATATGAAAATTTTCTACAAATCTCTTCGACAAATACTAATGTAGGAGATTTATTTCAAATTTAAAAGTTCTGTCTAATTTATTATACATGGACGATGGACAAATTATCTTTTGACTAAAATTCCAAAAACACCCACAGAAATCTTGTTGTTTTTACAATTTTTTATATATACAAAAATCTCAGTAAAATTCCCATAAAATTCTAGTAGCGTTATAACTTTATCTGTTATTATTTTTATAAAAATTTGAAAATACACTATTGTAGTTCTTATAACGTACGTAAATTTTAATTGTTGTTTGTATAAATTTTCAAAATTGATTCTTCCTAAATTTCAAATTGATGTTGTTAGTCCTTAATATTTCATTTCAAAAGTACATAAGGGTATACTTTATTTCATAGATCAATTTTTTAGGCATCAGCATGATAACATCATGTGTTGTTTGGAATGACAATTTGATTTGATTTTTAGGATATAAGCAAGTAATCTAGTACCATATTTGACAAGTCATTACTATTGTGTTGAAATTAGAAATACAATAATTAATACTTTGACTAAGTTTTAGTTTTTAACACTAATTTGATATGGTGTGAAAGTTATTTTTGCAGAATTTTCATATCAGTACACAATTTT


Gene Sequence:
>Vu_17675(-)
AAAATTTAATAACACCTATCACTCAAATAAATATATTTGGCACGTTGCATGTCAAGGTACTGCCCTTTAAAATATGCTCTATGAAATCTGAAGAAGTCATTCAACTCCACATATTTTCCACTTTGACTTTGACTGGTCCAAGTCATTCACTAACAAACAATCATCTCTTCCTCTCCTTTCCAACCACAGTACTAGTACAAATCATGATATAGTACTAAGCCACACAACTACACTCGTTAGAGGCAAACCATGATGTTCCTCCCTTTCACTTTCACCTTCTTAAAACTCTTCTTCCTCCTCCTACTACACTTCTCCACAAGCCTCCAAGCCTACACCTCAGAGGAAGTTTTCACCATCAATTGCGGCACCACCGGAAACTCCTCCGACGGTCAAAGAACCTGGACCGGCGACATCGACACAAAGTACTTATCTTCCCAAGACTCCACCGTTTCAGACAAGGCCTCAACACAATCTCCTTCAACCAATCAAGTCCCCTTCTCCACTGCACGATTGTCCCGTTCCCAATTCAATTACTCCTTCCTTGTCTCCCCAGGCCCCAAATTCCTTCGCCTCTTCTTCTACCCTTCTGACTACTCTTCCTTTCTCCGCACCCACGCATCTTTCTCCGTTCAATCCAACCAATTCACTCTCCTCCACGCTTTTAACGCCTCTCTTAACGCTGACGCTCAAGCCACCGACACTATCTTCAGAGAATACGTCGTCAACGTCAAAGACGGTGAGAGTCTTATCCTTACCTTCACCCCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACTCCACTAGATGACCCAGGATTCACTCTCGTGGGACATGATACGCTATTCAGCGTCGGAAGTAGCACTGCCATGGAAACAGTTTATCGTATTAAATCCGGAGGCCAGGAAATCTCACCACAAAACGACACCGGTTTGTTCAGGAATTGGGCTTCCGAAGAACGCTATTTTATCAAACACAATCCAAGGAATGATGATCTACCAGCTGACATGGATGGGAAAATGAACATAACCGTGAATCCCGATTACTTGGCACCAAAGGAACTGTTCAGAACAGCGCGTAACATGGGCACAAACGCCACTCTGAACAGAATGAGCAACCTCACTTGGGAGTTCCCCGTTGATTGTGGCTTCACTTACGTTATCAGACTCCACTTTTGCGAGCTTGATCCCGATATTAATGGCATCGGTGACAGGCAGTTTTACATTTACATTGCGAGTCAGGTGGCTGATGATCGTGCAGATGTAATGAAATGGAGTCAGAAACAAAAAGGTTTAGCTGTGCAAAGAAACTACGCCGTTTTAATTCCCAACAATGGTAGTCAGAAAAAGTTTAATCTCTCGCTTCAAATGCACCCTTACGAAAGCAGCGTGGATACGAGATACAGCGACGCCTTCCTCAACGGTCTCGAGATCTTCAAAACCAATGTAAACAACCTTGCTGGACCCGAGCCGGACCCCCTTCAGACTCCGCACAACATCATCCCCGGAAAGACAAGCAGCGGAAATGGAAAAACTAGAATTTTTGTCGTCGCAGGGGTGGGAATCGGTGTCGTATTTATCTCTCTTGTGATTTTATTTGTTGTTGTCTCGAGACACATCAGAACCACTGAAACGAATCCCAAGGAATACAAATCCAAGTTGTTCACAGCCACACAGAAAGCTTCCCTGCCGTCCGATCTCTGCCGCCACTTCTCCTTTGGGGAGATCGAAGCCGCCACCAACAACTTCGACGACGTCTTCATCGTCGGCGTCGGAGGATTCGGTCACGTGTACAAGGGTTACATCGACGGCGGCTTCACCCCGGTAGCAATCAAGCGCCTGAAACCGGGTTCGCAGCAGGGTGCGCACGAATTCTTGAACGAGATCGAGATGCTATCGCAGCTCCGCCATCTTCATCTGGTCTCCCTAATCGGATACTGCAACGAGATGAACGAGATGATACTGGTCTACGACTTCATGGCGCGCGGCACCCTACGCGACCATCTCTACAACACGGACAACCCCGCTATCTTGTGGAAGCAGCGCTTGCGGATCTGTATCGGCGCGGCGCGAGGGCTGCACTATCTCCACACAGGCGGGAAGCACACGATCATCCACCGCGACGTGAAAACAACGAACATCTTGTTAGATGATAAGTGGGTGGCGAAGGTTTCGGACTTCGGGCTTTCAAGAATCGGGCCAACAGGCACGGACAAGTCCCACGTGAGTACCCATGTGAAGGGAAGCTTTGGCTACATAGATCCCGAGTACTACAAACGATTTCGTCTAACGGAAAAGTCTGATGTTTACTCTTTCGGGGTTGTGCTGTTTGAGATACTGTGTGGTCGTCCAGCTTTGATTCACAGTGCAGAGACGCAGCAGGTATCGCTTTCTAACTGGGTGAGACATTGTGACCAAAATGGGACCATACCAGAGATTGTGGACCCCACGTTGAAGAAGAAGATTGCACCGGAGTGCCTGAAAACGTTTTGTCAGATTGGAATGAGTTGTTTGTTGGAAGATGGGACGAAGAGGCCTTCCATGAAGGACGTGGTTGCGATGTTGGAGTTTACGCTGCGGCTACAAGAAAGTGCAGAGCAACACTCGTCTGAAAAAGGAGAGGAAATTAGTGCGGATAGCTTTTCTACTACTGACATGTATGTCACTACTACGACTACCACCAGTGAAGATAATAACTATAGTAATAATACGGTGTCGTCTTGGACTCCTTTCTCCGAAATTATGGATCCAAAGCCGCGTTGACCAATCCAGTTAACGCAGACCTCTCCAAATGCTGGCCTTATAAAACCAAAAAGATCGTGGAACCTCTGTACAACAGTAACACTTTAGCATTTTTGTCTCCATTCATAGATTTAACAAGTTGTATATGAAAGAAAATTAAATTGAGTTTTGTATACTTATCCAAATATTTAATAATACAACTCCTTTTGTT