Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17639 LG4 38423976 38425517 PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 38424000 splice_region_variant&synonymous_variant p.Leu9Leu
T/C 38424004 splice_donor_variant&intron_variant
G/A 38424020 intron_variant
C/T 38424023 intron_variant
A/G 38424049 intron_variant
G/C,* 38424053 intron_variant
A/G 38424061 intron_variant
C/T 38424079 splice_region_variant&intron_variant
G/A 38424083 splice_region_variant&intron_variant
T/C 38424099 missense_variant p.Ile14Thr
T/C 38424122 missense_variant p.Tyr22His
T/A 38424124 stop_gained p.Tyr22*
C/T 38424133 synonymous_variant p.Leu25Leu
G/A 38424138 missense_variant p.Gly27Asp
T/C 38424139 synonymous_variant p.Gly27Gly
G/A 38424149 missense_variant p.Glu31Lys
T/C 38424161 synonymous_variant p.Leu35Leu
G/A 38424169 synonymous_variant p.Gln37Gln
C/T 38424176 missense_variant p.Arg40Cys
G/A 38424207 missense_variant p.Gly50Asp
G/A 38424218 missense_variant p.Ala54Thr
G/A 38424228 missense_variant p.Gly57Glu
A/C 38424229 synonymous_variant p.Gly57Gly
G/A 38424231 missense_variant p.Arg58Lys
A/G 38424279 missense_variant p.Asp74Gly
T/C 38424318 missense_variant p.Ile87Thr
C/G 38424319 missense_variant p.Ile87Met
C/T 38424340 synonymous_variant p.Asn94Asn
G/T 38424497 intron_variant
G/A 38424526 splice_region_variant&intron_variant
G/C 38424607 missense_variant p.Trp155Ser
T/G 38424633 missense_variant p.Tyr164Asp
T/C 38424641 splice_donor_variant&intron_variant
T/A 38424653 intron_variant
T/C 38424662 intron_variant
A/C 38424663 intron_variant
T/G 38424665 intron_variant
T/C 38424692 intron_variant
C/T 38424693 intron_variant
G/A,C 38424694 intron_variant
C/T 38424698 intron_variant
G/C 38424700 intron_variant
C/T 38424708 intron_variant
A/G 38424719 intron_variant
C/T 38424741 intron_variant
A/G 38424742 intron_variant
T/C 38424767 intron_variant
G/A 38424782 intron_variant
G/A 38424788 intron_variant
T/C 38424802 intron_variant
C/T 38424824 intron_variant
T/C 38424827 intron_variant
G/T 38424893 intron_variant
T/A 38424902 intron_variant
A/G 38424951 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17639.1
MPILRHLHLLGNLIALGNILRYLHLSGIPSEIGNLSQLVRFDAAYCGLSGDIPADLGRLQNMDTLFLQVNALSDSLTPELGNLKSLISMDLSNNVLSGEVPTSCAELKNLTLLNLNRVGVSRQLQLLLRLGVEEGKVGGKEEGGDVTRCDKEKWDGMGCDTIAHIHLDPHQSIKRGPLPEHKKYHTVHHQTQKSHFLSLPYLGKVFMLLLFLALEKSMKVWGT*


CDS Sequence:
>Vu_17639.1
ATGCCCATCCTCCGTCATCTCCACCTGCTTGGAAACCTCATCGCGCTTGGAAACATCCTCCGTTATCTCCACCTCAGCGGTATCCCGTCGGAGATTGGAAACTTGTCCCAGCTTGTCCGTTTCGACGCTGCGTATTGCGGACTCTCCGGCGATATTCCGGCTGACCTCGGAAGGCTTCAGAATATGGACACGCTCTTTCTTCAGGTGAATGCGCTCTCCGACTCGCTCACTCCTGAGCTGGGGAACCTGAAGAGTCTCATCTCGATGGATCTGTCCAACAACGTTCTCTCCGGCGAGGTTCCAACGAGCTGTGCGGAGCTTAAGAATCTAACTCTGCTGAACCTTAACCGTGTAGGAGTCAGTCGTCAGCTCCAACTCCTTCTTCGGTTAGGAGTGGAAGAAGGAAAAGTTGGAGGGAAGGAAGAAGGTGGGGATGTGACACGATGTGACAAGGAAAAATGGGATGGGATGGGATGTGACACAATTGCACATATTCATCTAGATCCTCATCAATCTATAAAACGAGGTCCCTTACCTGAACACAAGAAATATCACACTGTGCACCATCAGACACAAAAATCTCATTTTCTTTCACTTCCATACCTTGGTAAAGTGTTTATGCTATTGCTCTTCTTAGCTCTTGAAAAGTCCATGAAAGTATGGGGAACATGA


Promoter Sequence:
>Vu_17639::LG4:38421976-38423976(+)
TTCTTCTTCCTTAGATCCAACACAACATTTTCAATACAGACTTCAACTTCTTCACTCCTCCTTTGTAAGCTTCCTTCAATTTTCGAGTCTCCTTCATCAACCCATTCAAAGTAGTTACAACTTGAATTACTCTGCAAAAGAAATTACAAATCACGAATACAAACTTCATCACAATAAGTAAAACATTATCTCACTTACTGCCCAATTTCTACATCTATAAAACAGTCTCCCTTTGTTCTTCAATGTAGTTGCCTTCAACAGCAACAATCTTTCCCCACAACCACAATTTCTTGCAGCTAAGTCAGAGGAGGATCCACATGTTTGGGACATTCCAGAACCAATACTCCTTCGCGTGCAACCATTTCCTCCTCTGTCAGCTTCCATTTCCCTGATACAGTAATTTCCAAAGTAAATCAACTTCGACTACTCCCAACAAAAACCCTATATCCCAAATCCATCCATTCAGACGAAACGAAAGACGAAAATCAACTTATGTGACCATTTACACCAATGTTGAAGAAGATGAAATCCAACCTTTTGCGGTTCACCGAAACCTTCTTCCCAGCTGAAATTATGTGCTTATCAACCCTCGTCTTTGATTCACTTAAGAAGATCTAGTCCCTTAGTAAGTATATAAGCCCTTATCTCCGTCAGCTCATTTAATCACTAATCAATTTCAATTTAAAATGTAAACACACGTGGCAAATGTTACAAACGATACCTGTCATCCCACGTGCCTATACGTTAGCCACATCACCCGAATTTTAACGCCGTTTGTATTGGAGGACCAAAAATAATGGTTTCCTTAAAGACAGGGATCTAATCGTGCAAAGTTTGAAATAGGGACGAAAAATAAAAACGCTTGATAGTTCAGGGACTAAAAACATATTTAACCCTTGTTACTATTAAGGTAAATATTTTTCATGGGTCTTACAACAACAACACAAGAAAAGGAAAAGGAGAGTTATGGTTTTATCTATTAACTCAAAAAATGAAAAAGAGAAGGGGAAAAATTAGGAGAAAATCTATGGATTACCTACGAACAAAAATTTGTAAGTAAAATAGTCGTAAGTAATATTACCTACAAATTTATTCGTAGATAATTATATACAAATTTATTTATAGGTAATTACATGCAATTTTTTTCTTAGGTAATTACATACGAATAAATCCATATGTAAGTATCTACAGATAAATATGTATGTAAAATTACTTATCGATAAATCTGTATGTAATTATCTATGGATACATTCGCATTTAACTTGTAGGCCAAAATTTGAATATATTTGTAACAACACAAAGAAAATAAGCTTTTGTGAACACAATAAAAATGTACTATACAAAAGAAAAATAATAAATGCAACAAATTGACAGTACAATTTCTTAATGATAATATTTGAAAGATATGTCTATTATACAAAATTTGAAAATTACATTATTTGCAACTCAACTTAAAAAGTTGACAATTACATTTTTTTTTTGCAATTTAACAACTTGGCTTTCTAGCAATTTATCACTTGAAAAATTTGATAGGCAATTTATCATCTAAACTTATCACTTAAAGAATTTGATAGACAATTTATCATCTAAACTTAATTTCTTAAAGAATGAATCATATTTTTCTAGTAGATCAAGCTCAAATGCAATCATCACTAGTGCAATCAAAAGAAACGACAACGGTTATTTTTGCTGATAGGCACCGGTTTTTCAACCGAGGCATATTCAGACGAGGTAAAAAGTGATAGATTTTATGCCTCAGTTCAGAACCGAAGCATAAAATGGTAGGATTATGCTTCGGTTCAAAAATAATTGAAGTAGTAACATTTTTTATTTTTTTAAATTTTATGCCTCTGTTCCTGATGAACCGAGGTCGTTTCTCCCCCTCTCCTATTTCATCTCCTACCTCTCCCATGCCAATAATCAGTTCTTCGGCCCAATCCCCGCCTCCTTCTCCGCACTCTCTGGCCCAATCGGTCCCCTTCCCCTCGCCATCGCCGCCA


Gene Sequence:
>Vu_17639(+)
ATGCCCATCCTCCGTCATCTCCACCTGGTGACAACTTTTTCTCCGGCCAGATCCCTCCTGAGTATGGCACCTGACAGGACCTAACAAGCTCATGGGAAACATCCCCGGAGCTTGGAAACCTCATCGCGCTTGGAAACATCCTCCGTTATCTCCACCTCAGCGGTATCCCGTCGGAGATTGGAAACTTGTCCCAGCTTGTCCGTTTCGACGCTGCGTATTGCGGACTCTCCGGCGATATTCCGGCTGACCTCGGAAGGCTTCAGAATATGGACACGCTCTTTCTTCAGGTGAATGCGCTCTCCGACTCGCTCACTCCTGAGCTGGGGAACCTGAAGAGTCTCATCTCGATGGATCTGTCCAACAACGTTCTCTCCGGCGAGGTTCCAACGAGCTGTGCGGAGCTTAAGAATCTAACTCTGCTGAACCTTAACCGTGTAGGAGTCAGTCGTCAGCTCCAACTCCTTCTTCGTTTCTGAAACTGAAGTATACTAGTGAGATTATTATTAATGAGTGAAGCACGTGCTTGGTGAAGTAGCATTGTTATTTTTTAGGGTTAGGAGTGGAAGAAGGAAAAGTTGGAGGGAAGGAAGAAGGTGGGGATGTGACACGATGTGACAAGGAAAAATGGGATGGGATGGGATGTGACACAATTGCACATATTCATGTCATTAATGGCCTCAGTTCTGTAATGACCGAGGCATAAACTTCTTTCGACATCGGTTCTGTATAGAACCGAAGCACTAAATTACGTGTCAGGCCAAAACTCAGTTTTGCAGAGGCGCAGGTGACTTTTTCAGAAAGTATCAGACACCGGTTATGATTTGAATCGAGGTAAGATGCCCTATATGCTTTGGATATTCTTAAACCGGTGCATATAAGTTTGTGAAAATTACAAGATTGCCATCGTTTTCAGATAGGCTTCGATTTTTTTTTTACCGAAACCTATTTGACGAATTCAAAAACATATTTTTTACCAGTGCATGTGAATAACTCGAGTTAATGTAAGCTATTTTAAGCATAACAAACACCAACAAACCTTTTGATAGATTTGGGAAGAAATTGTTCTCTGGTTCACACTTGATGTACACAATATTTTTGTACTTTCCACTTCCTGCATTCAACCTTCCAACAATCACACTCGAATCTTTGTATCCCGGTCATCACCATTCATCACTTCATTAACTTTTTACTTCAAAAAACTAAATTTTTTATAGAAGTTCAACATGGGTGGAAAAGTAATTATCGGAAAAGTTGGATCCTGCAGAACTAGAGTCTAGAATCATCTACGTGCAAGTATAGCAGACACAGTAATTATTATATTTTCATGGGTGAAATGTGGACAAGTGTTTTTCTTTTCTTTGTTCTAAGCTAGATCCTCATCAATCTATAAAACGAGGTCCCTTACCTGAACACAAGAAATATCACACTGTGCACCATCAGACACAAAAATCTCATTTTCTTTCACTTCCATACCTTGGTAAAGTGTTTATGCTATTGCTCTTCTTAGCTCTTGAAAAGTCCATGAAAGTATGGGGAACATGA