Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17567 LG4 37632023 37635524 putative disease resistance protein At3g14460
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C 37632273 synonymous_variant p.Thr737Thr
C/T 37632281 missense_variant p.Ala735Thr
A/G 37632297 synonymous_variant p.Phe729Phe
C/A 37632850 stop_lost p.Ter545Leuext*?
A/G 37632948 synonymous_variant p.Ser512Ser
T/G 37632970 stop_lost p.Ter505Serext*?
T/A,* 37632989 missense_variant p.Met499Leu
A/G 37633014 synonymous_variant p.Ile490Ile
C/G 37633110 missense_variant p.Glu458Asp
G/A 37633122 synonymous_variant p.Val454Val
A/T 37633242 missense_variant p.His414Gln
T/G 37633243 missense_variant p.His414Pro
A/T 37633274 missense_variant p.Ser404Thr
A/C 37633305 missense_variant p.Ser393Arg
A/G 37633325 missense_variant p.Ser387Pro
C/T 37633328 missense_variant p.Glu386Lys
C/T 37633524 synonymous_variant p.Glu320Glu
C/T 37633594 missense_variant p.Arg297His
C/T 37633625 missense_variant p.Gly287Arg
G/T 37633627 missense_variant p.Ser286Tyr
G/A 37633632 synonymous_variant p.Phe284Phe
G/A 37633639 missense_variant p.Pro282Leu
G/A 37633640 missense_variant p.Pro282Ser
T/C 37633646 missense_variant p.Ile280Val
C/T 37633647 synonymous_variant p.Glu279Glu
C/T 37633658 missense_variant p.Ala276Thr
T/A 37633665 synonymous_variant p.Leu273Leu
G/A 37633673 missense_variant p.Leu271Phe
A/G 37633677 synonymous_variant p.Asn269Asn
A/G 37633685 stop_lost p.Ter267Argext*?
C/T 37633694 missense_variant p.Glu264Lys
G/T 37633701 missense_variant p.Phe261Leu
A/C 37633702 missense_variant p.Phe261Cys
A/G 37633706 missense_variant p.Tyr260His
C/T 37633708 missense_variant p.Gly259Glu
T/A 37633711 missense_variant p.Tyr258Phe
G/A 37633715 missense_variant p.Pro257Ser
C/T 37633718 missense_variant p.Gly256Arg
A/G 37633724 missense_variant p.Phe254Leu
T/C 37633725 synonymous_variant p.Ser253Ser
A/G 37633742 stop_lost p.Ter248Argext*?
A/T 37633748 missense_variant p.Cys246Ser
G/C 37633762 missense_variant p.Thr241Arg
T/A 37633769 missense_variant&splice_region_variant p.Thr239Ser
C/T 37633770 splice_acceptor_variant&intron_variant
T/G 37633772 splice_region_variant&intron_variant
A/G 37633775 splice_region_variant&intron_variant
C/G 37633793 intron_variant
C/A 37633801 intron_variant
G/A 37634011 intron_variant
G/A 37634021 intron_variant
G/A 37634051 intron_variant
G/A 37634056 intron_variant
G/A 37634072 intron_variant
A/T 37634076 intron_variant
T/G 37634077 intron_variant
C/T 37634081 intron_variant
C/T 37634083 intron_variant
G/A 37634084 intron_variant
C/T 37634087 intron_variant
G/A 37634102 intron_variant
T/A 37634122 intron_variant
G/A 37634145 splice_region_variant&intron_variant
C/T 37634166 missense_variant p.Cys234Tyr
C/T 37634175 stop_retained_variant p.Ter231Ter
T/A 37634434 missense_variant p.Arg145Trp
A/T 37634460 missense_variant p.Met136Lys
T/C 37634534 synonymous_variant p.Leu111Leu
T/C 37634633 intron_variant
A/G 37634665 intron_variant
C/T 37634684 intron_variant
A/T 37634748 intron_variant
G/A 37634749 intron_variant
G/A,T 37634751 intron_variant
C/T,A 37634756 intron_variant
T/C,A 37634772 intron_variant
T/A,G 37634778 intron_variant
G/C 37634781 intron_variant
C/T 37634786 intron_variant
A/G 37634790 intron_variant
G/A 37634795 intron_variant
G/A 37634850 intron_variant
G/A 37634856 intron_variant
T/C 37635312 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17567.1
MAAEIVGGALLSAFLQVAFDKLASPKFVDFFRGRKLDEKLLGNLNIMLHSINSLAQDAEQKQFTDSNIMNSPDAKWKLNPNLKPLLTSYGAPGSRILVTTRVEKVASNMRSKVHHLKQLEKDECWKVFNKQALKDDDLELNDEKKEIGRRIVEKCKGLPLALKTIGSLLHTKSSILDWQSVLESDIWDLPKEVEIIPALLLSYQHLPSHLKRCFAYCALFPKDYEFDKKELILLWMAEGLRQVPDSVGDLKHLHSLDLTGTSIQKLPDSICLLYNLLILRLNHCSNLEELPSNLHKLAKLSCLEFESTKVTKMPMHFEKLRNLQVLNTFCIDRNSEFSTRLLGRLKLNHHGRLTIKEVQNIVNPLHALEANLKNKHLVVLELKWNSNHVSDDPVKENKVLENLHPSKHLEHLSIINYGGTQFPSWVFDNSLSNLGSLWLANCKYCLCLPPFGLLSSLKSLTIMGFDGIVSIGAEFYGTSSSSFKSLKTLVFCNMMEWEEWECKTANFPRLQHLSIDRCPKLKGLSDQLLHSKQLTINSCDELIISENSMNTSSLEILHIYSCPLVSIPSTHNDFLEVIQIVGGCDSLTIFPLDFFPKLRLLRLRRCQNLRRISQEHAHDHLNELTITDCPQFESFPSEGLSAPCLEIIAIEGAENLKLLPKRMKILLQSLKNLRIIDCPQVEMLSDEGLPRNVKYVSLSSLKLMASLRESFDGNTSLERLCIEKVDVECFPNEGLLPLSLISLQILDCPNLKKLNYKGLCHLSSLTLLHCHNLQCLPVEGLPKSISSLAIRGCPLLQLRCQKPKGQDWVKIAHIEELIIG*


CDS Sequence:
>Vu_17567.1
ATGGCAGCAGAAATTGTTGGTGGTGCTCTTCTTTCTGCTTTTCTTCAGGTTGCATTCGACAAGTTGGCTTCTCCTAAATTTGTAGACTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTCGGCAATTTGAACATCATGCTGCACTCCATCAATTCTCTCGCTCAAGATGCAGAACAGAAGCAGTTCACTGATTCAAACATTATGAACTCACCAGATGCCAAGTGGAAGCTGAATCCGAACCTCAAACCTTTACTCACAAGCTATGGGGCTCCAGGAAGTAGAATTCTTGTCACAACACGTGTTGAGAAAGTTGCTTCTAACATGAGATCTAAAGTGCATCACCTAAAGCAATTAGAAAAGGATGAATGCTGGAAAGTTTTTAACAAACAAGCTTTGAAAGATGATGATCTTGAATTGAATGACGAGAAAAAGGAGATTGGTAGAAGGATAGTTGAGAAGTGCAAAGGACTACCTCTTGCTTTGAAAACAATTGGAAGTCTTCTCCATACAAAGTCATCCATTTTAGATTGGCAAAGCGTATTGGAAAGCGACATATGGGACTTACCGAAAGAAGTTGAAATTATCCCTGCTCTATTATTGAGTTATCAGCATCTTCCTTCTCACCTTAAGAGGTGCTTTGCTTATTGTGCGTTATTTCCGAAAGATTATGAATTTGACAAGAAGGAATTGATTTTGTTGTGGATGGCTGAAGGACTTAGACAGGTCCCAGATTCTGTTGGTGATCTTAAACATCTTCATTCGTTGGACCTTACGGGTACTTCGATACAGAAACTGCCTGACTCAATATGCTTGCTCTATAACTTGCTAATACTGAGATTGAACCATTGTTCAAATCTGGAGGAGTTGCCCTCAAATTTGCATAAACTCGCCAAATTGAGCTGCCTAGAATTTGAAAGTACAAAAGTGACTAAGATGCCAATGCATTTTGAAAAATTGAGGAATCTTCAAGTACTGAATACGTTTTGTATCGATAGAAATAGTGAATTCAGTACTAGGCTTTTAGGAAGACTCAAACTCAATCATCATGGAAGGCTAACAATTAAGGAGGTGCAAAATATTGTGAATCCTTTGCATGCATTAGAAGCAAATTTGAAAAATAAACACCTTGTGGTACTAGAGTTAAAATGGAATTCGAATCATGTCTCTGATGATCCAGTAAAAGAAAATAAAGTACTTGAGAATCTACATCCTTCCAAACACTTGGAACATTTGTCAATCATTAACTATGGTGGTACACAATTCCCAAGTTGGGTATTCGATAATTCATTATCAAATTTGGGGTCTTTATGGTTGGCTAACTGTAAATATTGCCTATGTTTGCCTCCCTTTGGACTTCTGTCATCTCTGAAGAGCCTCACCATTATGGGGTTTGATGGAATAGTGAGCATTGGTGCTGAATTTTATGGGACCAGCTCTTCTTCATTCAAGTCGTTGAAAACATTGGTATTCTGCAACATGATGGAATGGGAAGAATGGGAATGTAAAACTGCTAATTTTCCACGTCTTCAACATCTTTCAATTGATAGATGTCCTAAGCTGAAAGGTCTCTCAGACCAACTTCTTCATTCAAAGCAACTAACTATTAATTCCTGTGATGAGCTCATCATTAGTGAAAATAGTATGAACACATCGTCGCTTGAAATCTTGCATATTTATTCATGTCCTCTTGTGAGTATTCCCTCTACGCATAATGATTTCCTTGAAGTAATACAGATTGTTGGTGGCTGCGACTCTCTTACAATCTTTCCGCTAGATTTCTTTCCAAAGCTCCGTTTACTTCGATTGCGAAGGTGCCAAAACTTGCGAAGAATTTCACAAGAGCACGCTCATGATCATCTCAACGAACTGACAATTACCGATTGCCCTCAATTTGAATCATTCCCCAGTGAAGGATTATCTGCGCCGTGTCTAGAAATAATTGCAATTGAAGGAGCTGAGAATTTGAAGTTGTTGCCAAAACGCATGAAAATCCTGCTTCAATCTCTTAAGAACCTGCGGATAATTGATTGTCCACAAGTGGAGATGCTCTCAGACGAAGGTTTGCCAAGAAATGTAAAATATGTGTCTCTTTCAAGTTTAAAACTTATGGCATCCTTGAGAGAGAGCTTTGATGGGAACACAAGTCTTGAACGGTTGTGCATTGAAAAGGTGGATGTGGAGTGTTTTCCAAATGAAGGTTTGCTGCCACTCTCTCTCATCTCTTTACAAATCCTTGATTGCCCAAATCTTAAAAAGCTGAACTACAAGGGTCTCTGTCACCTTTCTTCTCTCACACTTCTTCACTGCCACAACCTTCAATGTTTACCGGTGGAGGGTCTACCCAAATCCATCTCTTCTCTCGCAATTCGGGGTTGCCCATTGCTCCAACTGCGTTGTCAGAAGCCAAAAGGCCAAGACTGGGTAAAGATTGCTCATATTGAAGAATTGATTATTGGATAA


Promoter Sequence:
>Vu_17567::LG4:37635524-37637524(-)
TGTAACTTTTAGAAGTTACGTAAAAGGGTTATGACCCCATTTGTGGAGACATAACATCATTCCAATATTTTTTGCTTCTTTTCCATCAAAAGAGAAACCCAAAAAGGAATATAAGGTACTCTACATTTGCAAGATGACTACTCATTTCTAATCTCATCAACTTCATGACTCTCAATGGCAAATTCAGGTATGCTTCCATATCATCATGAATAGGAGAATGTATTTTTTTTATATGGAAAGGATATTCGTACTTTTAATTTAGTTGCACTTTGAATATGTAAAGACCTCTTTTTACTTTTAAACATTTTGCTATACACACTTATTAGGATGAATTTGGTTAATAAGAAGACTTCAATGTAAATCATGATTTGTATAAAAATTGAGACACCCTTATGCTCGTGTTCTTGTGGTTTATTGGTTTAGTCTTGCTAGTCACGTATGTAATTCTCAGTGTGCAGGACAGTTCACTTAAGCAACAATCCAACAACTCATTCAAATACTACCAATGTATACAATATATATTAAAAATTTAAACATTGTTATAAAGAAAACCAAATTAAATATAAATTATTAAAATTGAGATCACACTGAGAAATCTATAAAAATAGATATCAAAGGAGTAGGTAAACCTCCTTTATATGAAATGTTTAATTGTTTGTACTATTTATTTTTTAAAACAATGTACTTTTCTTATAGGTTGACTTATTTTTTATTTTTTGAAAATCTCGCTCCCATCCACTTATATCAGCTCTGTGCAACTTCAACACAAGTGTGGAAGGACTTCCTTACATCCATAGAGGACGTCATCAAACGTTTCCTGTCAACATTTACATTCTGTCGTTAACAATTTAAACCTTATAAAAAAAACCATATTAAACATAAATTACTAAAATTAAAATCATAATAAATACTCAAGACTCTTATATCAAATAAAGTTGATTAAAAAAAATACTAAAAGACTATTAAAACCTCCTTTATATAAAATACTTGATTGTTTGTACTTTTTATTTTTTAATATGTTGTATTTTTATCATAAGTTGACTTAATTTTTATTTTTTGAAAATTTTCACACCATATTTATTGTACCAATATAGTTAATTTGTAAGATCGTAAAACAAATAAAGTTAAAAGCTTAATCAACCTAATTAGGTAATTAAACTCAAAATATTGATTACATAGTTTGATAAAAATTAAATTAAACCCAAATTAAAAAATATATATTAACAATACAATAAAAATAACAACAAACCATGATCTGGTACGTCTCGACTTTTTTGTCCGAGATATCCTTACTTCGACATGAAATATCTGTAAATACTTCGACATTCAAGTCGATGTAATTTTGGTAAAACCCAATTGAGTGAATATATTTCAAAATAAACTTTATCTAAAAACATATCACCTTCGTATATTTTATAATTTGGATTCTTCCCTTAATAGACTGACTCTCTATATTAGAAATATAATCTAGGAAGATTTAGATTATACAATGAACGTCATATTGACTCATTATTGCCTTGTCAAAACTGGCATGATGCGGACATTTCAGACCTGGCAGTAGCCCCATATTTCCTGTTGAACGTAATGCAACAAGAGTCTTAGACAGACAATTACGTTCTGCAGAATCAAAGGAATCTCCTTTAGCTTTGCATGTTGTTCATTGACAACAGGGTTCACACCAGTCACGAGATGAAGCAGCTTTTGTCTCCTTACTTTTATACCTTTAAGTCTGAGAATATCCAAACATTGGTTTCAAAATAATGTATACCAAGTCAGATGTCACTACTGATTTCTTATTGTCAGACATCCATTTATGCATTACAGCTGTGAACATTTTTATGATCAGAAAGACTCAACAATTATTGTTTCACTGGGGCCCACAACCCTCTTTCCATGTTAGGATTTCATACTTTCATTATAGCATCCCTGCATGGAATCCCTGTGGTAAACTTCCATCTCAAATTACACATTTCCATTCACCATTTTGCAACAACTATACC


Gene Sequence:
>Vu_17567(-)
ATGGCAGCAGAAATTGTTGGTGGTGCTCTTCTTTCTGCTTTTCTTCAGGTTGCATTCGACAAGTTGGCTTCTCCTAAATTTGTAGACTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTCGGCAATTTGAACATCATGCTGCACTCCATCAATTCTCTCGCTCAAGATGCAGAACAGAAGCAGTTCACTGATTCAAACGTTAAAGCATGACTTTTTTCTGTCAAAGAGACTGTCTTTGATGCAGAAGATCTCTTGGGTGAAATAGATTATGAACTCACCAGATGCCAAGTGGAAGCTGAATCCGAACCTCAAACCTTTACTCACAAGGTATCAAATTTCTTCACCTCTACTTTCAGTTCATTTAACAAGAAAATTGAATCAGAGATGAAAGAAATCCTTGAAAAACTAGAATATCTTGCAAAGCAAAAGGGTGCTCTTGGTTTGAAAGAGAGTACTTATTCTGATGATAGATCAGGTAGTAAAGTGTCACAGAAATTGCCATCATCTTCTTTGGTGGTTGAAAGTGTTATTTATGGCAGAGATGCGGACAAAGAAAAGATCTCTGATTGGCTCACATCTGAAACCGATGATCATAACCATCCATCAATACTTTCCATTGTGGGAATGGGTGGGCTGGGTAAGACCACACTCGCCCAACATGTATACAATGACCCAAAGATTGAGGAGGCTAAATTTGATATCAGAGCTTGGGTGTGTGTTTCCGATCATTTTGATGTTTTCACAGTGACAAAAACAATTCTTGAGGCAATCACTAAATCTAAAGATGATAGCGCAGACCTAGAAATGGTTCATGGAAGATTGAAAGGAAACGTATCTGGAAAGAAATTTCTTCTTGTTTTGGATGATGTTTGGAACGAAAGGCGAGAAAAATGGGAAGCTGTGCGAACTCCTCTTAGCTATGGGGCTCCAGGAAGTAGAATTCTTGTCACAACACGTGTTGAGAAAGTTGCTTCTAACATGAGATCTAAAGTGCATCACCTAAAGCAATTAGAAAAGGATGAATGCTGGAAAGTTTTTAACAAACAAGCTTTGAAAGATGATGATCTTGAATTGAATGACGAGAAAAAGGAGATTGGTAGAAGGATAGTTGAGAAGTGCAAAGGACTACCTCTTGCTTTGAAAACAATTGGAAGTCTTCTCCATACAAAGTCATCCATTTTAGATTGGCAAAGCGTATTGGAAAGCGACATATGGGACTTACCGAAAGAAGTTGAAATTATCCCTGCTCTATTATTGAGTTATCAGCATCTTCCTTCTCACCTTAAGAGGTGCTTTGCTTATTGTGCGTTATTTCCGAAAGATTATGAATTTGACAAGAAGGAATTGATTTTGTTGTGGATGGCTGAAGGTTTTCTCCATCATTCTCAACCGAACAAGAAATTTATTAACGAGGTCTTTCTTTCTTCAATCAAGGTTCGAGATGATATTCGTCATGCATGACCTTCTGAACGATTTGGCAAAATATGTTTGTGGAGACTTCTGTTTCAGGCTGAAATTTGATAAAGGAAACTGTATACCCAAAACAACCCGTCATTTTTCATTTGCATTCAATGATGTAAGATATTTTGATGGTTTTGAGAGTTTAACTGATGCTAAAAGACTGCGTTCATTTGTTCCGATTAGGCATATTTGGAACCTTACCTGTTCTGCTTGGCAGTTCAAGATTTCTTTACACGATTTCTTCTCCAAGATTAAGTTTGTACGTGTGTTATCTTTGTCTTGTTGTTCAGGACTTAGACAGGTCCCAGATTCTGTTGGTGATCTTAAACATCTTCATTCGTTGGACCTTACGGGTACTTCGATACAGAAACTGCCTGACTCAATATGCTTGCTCTATAACTTGCTAATACTGAGATTGAACCATTGTTCAAATCTGGAGGAGTTGCCCTCAAATTTGCATAAACTCGCCAAATTGAGCTGCCTAGAATTTGAAAGTACAAAAGTGACTAAGATGCCAATGCATTTTGAAAAATTGAGGAATCTTCAAGTACTGAATACGTTTTGTATCGATAGAAATAGTGAATTCAGTACTAGGCTTTTAGGAAGACTCAAACTCAATCATCATGGAAGGCTAACAATTAAGGAGGTGCAAAATATTGTGAATCCTTTGCATGCATTAGAAGCAAATTTGAAAAATAAACACCTTGTGGTACTAGAGTTAAAATGGAATTCGAATCATGTCTCTGATGATCCAGTAAAAGAAAATAAAGTACTTGAGAATCTACATCCTTCCAAACACTTGGAACATTTGTCAATCATTAACTATGGTGGTACACAATTCCCAAGTTGGGTATTCGATAATTCATTATCAAATTTGGGGTCTTTATGGTTGGCTAACTGTAAATATTGCCTATGTTTGCCTCCCTTTGGACTTCTGTCATCTCTGAAGAGCCTCACCATTATGGGGTTTGATGGAATAGTGAGCATTGGTGCTGAATTTTATGGGACCAGCTCTTCTTCATTCAAGTCGTTGAAAACATTGGTATTCTGCAACATGATGGAATGGGAAGAATGGGAATGTAAAACTGCTAATTTTCCACGTCTTCAACATCTTTCAATTGATAGATGTCCTAAGCTGAAAGGTCTCTCAGACCAACTTCTTCATTCAAAGCAACTAACTATTAATTCCTGTGATGAGCTCATCATTAGTGAAAATAGTATGAACACATCGTCGCTTGAAATCTTGCATATTTATTCATGTCCTCTTGTGAGTATTCCCTCTACGCATAATGATTTCCTTGAAGTAATACAGATTGTTGGTGGCTGCGACTCTCTTACAATCTTTCCGCTAGATTTCTTTCCAAAGCTCCGTTTACTTCGATTGCGAAGGTGCCAAAACTTGCGAAGAATTTCACAAGAGCACGCTCATGATCATCTCAACGAACTGACAATTACCGATTGCCCTCAATTTGAATCATTCCCCAGTGAAGGATTATCTGCGCCGTGTCTAGAAATAATTGCAATTGAAGGAGCTGAGAATTTGAAGTTGTTGCCAAAACGCATGAAAATCCTGCTTCAATCTCTTAAGAACCTGCGGATAATTGATTGTCCACAAGTGGAGATGCTCTCAGACGAAGGTTTGCCAAGAAATGTAAAATATGTGTCTCTTTCAAGTTTAAAACTTATGGCATCCTTGAGAGAGAGCTTTGATGGGAACACAAGTCTTGAACGGTTGTGCATTGAAAAGGTGGATGTGGAGTGTTTTCCAAATGAAGGTTTGCTGCCACTCTCTCTCATCTCTTTACAAATCCTTGATTGCCCAAATCTTAAAAAGCTGAACTACAAGGGTCTCTGTCACCTTTCTTCTCTCACACTTCTTCACTGCCACAACCTTCAATGTTTACCGGTGGAGGGTCTACCCAAATCCATCTCTTCTCTCGCAATTCGGGGTTGCCCATTGCTCCAACTGCGTTGTCAGAAGCCAAAAGGCCAAGACTGGGTAAAGATTGCTCATATTGAAGAATTGATTATTGGATAA