Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17544 LG4 37164870 37168725 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 37164921 synonymous_variant p.Asn663Asn
G/A 37164942 synonymous_variant p.Leu656Leu
T/C 37165130 missense_variant p.Lys594Glu
A/C 37165183 missense_variant p.Val576Gly
T/C 37165200 synonymous_variant p.Lys570Lys
G/C 37165212 missense_variant p.Ile566Met
T/C 37165292 missense_variant p.Asn540Asp
A/C 37165305 synonymous_variant p.Ser535Ser
A/C 37165307 missense_variant p.Ser535Ala
C/T 37165310 missense_variant p.Val534Ile
C/T 37165319 missense_variant p.Gly531Arg
T/C 37165377 synonymous_variant p.Lys511Lys
A/T 37165401 splice_region_variant&intron_variant
T/C 37165447 intron_variant
G/A 37165463 intron_variant
T/G 37165557 missense_variant p.Gln480Pro
A/G 37165562 synonymous_variant p.Ile478Ile
C/A 37165566 missense_variant p.Gly477Val
A/C,* 37165695 missense_variant p.Ile434Arg
A/T 37165748 synonymous_variant p.Leu416Leu
C/A 37165759 missense_variant p.Val413Leu
C/T 37165887 missense_variant p.Arg370Gln
G/C 37165918 missense_variant p.Gln360Glu
C/G 37165957 missense_variant p.Glu347Gln
A/T 37166169 stop_gained p.Leu276*
A/T 37166170 missense_variant p.Leu276Ile
C/G 37166387 missense_variant p.Ala237Pro
A/G 37166420 stop_lost p.Ter226Glnext*?
G/C 37166427 missense_variant p.Cys223Trp
T/A 37166566 stop_gained p.Arg207*
C/T 37166629 missense_variant p.Asp186Asn
A/G 37166645 synonymous_variant p.Ile180Ile
T/A 37166661 splice_acceptor_variant&intron_variant
G/T 37166768 intron_variant
T/A 37166791 intron_variant
C/T 37166806 intron_variant
C/T 37166843 intron_variant
C/T 37166851 intron_variant
T/C 37166856 intron_variant
A/G 37166871 intron_variant
A/T 37166912 intron_variant
G/T 37166987 intron_variant
T/C 37167138 intron_variant
T/C 37167172 intron_variant
C/A 37167329 intron_variant
C/T 37167349 intron_variant
A/C 37167449 intron_variant
A/T 37167509 intron_variant
G/A 37167517 intron_variant
G/C 37167569 intron_variant
T/C 37167590 intron_variant
A/G 37167595 intron_variant
A/T 37167611 intron_variant
T/A 37167677 intron_variant
T/C,A 37167680 intron_variant
A/T 37167681 intron_variant
T/A 37167691 intron_variant
T/G 37167695 intron_variant
C/T 37167713 intron_variant
C/G 37167716 intron_variant
C/A 37167718 intron_variant
C/A 37167721 intron_variant
A/G 37167728 intron_variant
A/G 37167740 intron_variant
T/G 37167742 intron_variant
T/C 37167842 intron_variant
G/A 37167843 intron_variant
T/A 37168101 intron_variant
T/A 37168157 intron_variant
G/A 37168158 intron_variant
C/T 37168169 intron_variant
T/C 37168231 synonymous_variant p.Gln165Gln
C/A 37168283 missense_variant p.Trp148Leu
T/A 37168289 missense_variant p.Glu146Val
C/T 37168342 synonymous_variant p.Glu128Glu
G/A 37168381 synonymous_variant p.His115His
A/T 37168428 missense_variant p.Leu100Met
C/T 37168429 synonymous_variant p.Leu99Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17544.1
MAAISCSYAFSHDVFLSFRGSDTRHGFVGNLYKALDDKGIHTFIDDEKLQRGEEITPALMKAIEESRIAITVLSHNYASSSFCLDELVHIIACAKEKGLLVLPVFYDLNPSDVRHQKGSYAEALTRHEERFKDKKESFSHNMERLEKWKMALHHVASLSGYHFKQGYPFYQTFTQGTSEIEIIHLDFPLLDKEEMVEWNRKAFKKMRNLKTLIIKSDFHSKKLAMCKLPQSCFTSHELKFMGMRFLNLDKSKSLTQIPDVSGLPNLEKLSFQHCQNLTAIHNSIGFLCKLKILSAFGCTKLVSFPPIKLTALEKLNLSRCYSLENFPEILGKMENIRELQLEYTAIKEFPYSFQNLTRLQQLQLSNCGVVRLPSSIAVMPELTDLIGWKWKGWQWLKQEEDEEKEGSSIVSSNVEYLWASECNLCDDFFSIGFMIFAHVKDLDLSKNNFTMLPECIKEFQFLRKLNVSDCKLLQEIRGIPQSLKHFLATNCKSLTPSSTSMFLNQELHEAGKTQFYLPGERVPEWFDHQSNGPSVSFWFRNRFPEKVLCLVIGPVNDSGMFRPMVVINGNKCFLGSVYFMMGMDHTYIFDLLTIKFEDNLYGVPLENEWNHAEVKYVGLEETSILKQSGIHVFKQESGLEAVWFSDPYGKRKLEDDLNSFESQNQQLLKKHRFVDMEAYT*


CDS Sequence:
>Vu_17544.1
ATGGCTGCAATATCATGTTCCTATGCCTTCTCCCATGATGTGTTCCTCAGCTTTAGAGGCTCAGACACACGCCATGGTTTTGTTGGGAATCTTTACAAAGCTCTTGATGACAAGGGAATCCATACTTTCATTGATGATGAGAAGCTTCAGAGAGGAGAGGAAATAACACCTGCACTTATGAAGGCAATTGAAGAGTCTAGGATTGCCATCACTGTGCTCTCTCACAACTATGCTTCTTCATCATTTTGTTTAGATGAACTTGTTCATATCATTGCTTGTGCTAAGGAGAAAGGCTTGTTGGTTTTGCCTGTTTTTTATGACTTAAATCCTTCTGATGTAAGACACCAGAAAGGTAGTTATGCAGAAGCATTGACAAGGCATGAGGAAAGGTTCAAAGACAAGAAGGAAAGTTTCAGCCATAACATGGAGAGGTTGGAGAAATGGAAGATGGCTTTGCATCATGTGGCTAGCTTGTCTGGCTATCATTTCAAACAAGGGTACCCCTTTTACCAAACTTTTACTCAAGGAACTAGTGAAATTGAAATCATACATTTGGATTTTCCCCTACTTGACAAAGAAGAAATGGTAGAATGGAACAGAAAGGCCTTCAAGAAGATGAGAAACCTCAAAACACTAATTATTAAAAGTGATTTTCATTCAAAGAAACTTGCCATGTGTAAATTACCTCAGAGTTGCTTTACATCACATGAGCTGAAGTTCATGGGTATGAGATTTTTAAATTTGGACAAAAGCAAATCTTTAACACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAGAAACTTTCATTTCAACATTGTCAGAATTTAACTGCAATTCACAATTCCATTGGCTTTCTATGTAAACTCAAAATATTGAGTGCTTTTGGCTGCACCAAACTCGTGAGTTTTCCACCTATCAAGTTGACTGCTCTTGAAAAGCTCAATCTCTCACGTTGTTACAGTCTTGAAAACTTTCCAGAAATATTAGGAAAGATGGAAAACATAAGGGAACTTCAGTTAGAGTACACAGCCATAAAAGAATTTCCATATTCTTTTCAAAATCTTACACGGCTTCAACAGTTACAACTATCAAACTGTGGAGTTGTTCGATTACCGAGTAGCATTGCTGTGATGCCAGAACTGACTGATCTTATTGGTTGGAAATGGAAAGGGTGGCAATGGCTGAAACAGGAAGAGGATGAAGAAAAAGAGGGATCATCTATAGTATCTTCAAATGTAGAATATCTTTGGGCCTCAGAATGCAACCTGTGTGATGATTTCTTTTCAATCGGTTTCATGATATTTGCTCATGTGAAAGACTTAGACTTATCAAAGAACAATTTCACAATGCTACCTGAATGCATCAAAGAGTTTCAATTTTTAAGGAAGCTTAATGTGAGTGATTGCAAGCTTCTTCAGGAAATTAGAGGGATTCCACAAAGCTTGAAACATTTCTTAGCAACAAATTGTAAATCCTTGACTCCCTCAAGTACAAGCATGTTCCTAAATCAGGAACTACATGAGGCTGGAAAAACTCAGTTTTATTTACCAGGAGAAAGGGTTCCAGAATGGTTTGATCACCAAAGTAATGGACCTTCAGTTTCTTTCTGGTTTCGTAATAGGTTTCCTGAGAAGGTTCTTTGTCTTGTTATTGGACCTGTGAATGACTCTGGAATGTTTAGGCCTATGGTAGTCATCAATGGCAATAAATGTTTTCTTGGTAGTGTCTATTTCATGATGGGAATGGATCATACATATATTTTTGATCTTCTAACAATAAAGTTTGAAGATAACTTATATGGAGTTCCTTTAGAAAATGAATGGAACCATGCTGAAGTTAAATACGTAGGTCTGGAAGAGACATCAATCCTTAAACAAAGTGGAATTCATGTTTTCAAACAAGAAAGTGGCCTGGAGGCTGTTTGGTTTTCTGATCCTTATGGCAAGAGAAAATTAGAAGATGATCTCAATAGTTTTGAATCACAAAATCAACAACTGCTAAAAAAGCATAGGTTTGTGGACATGGAAGCTTATACATGA


Promoter Sequence:
>Vu_17544::LG4:37168725-37170725(-)
TTTGAAAGTACTTCATGGAGTCTAATGAAAACAAAAAACGTATTTTTGACAGTTTTTTTTTAAGAAATGTTTTCGATTAAATCAGAAATAGGGGATAAAAAGGAAATCGATTGTTTTTTTTTTTTTAATTTAAATGACTAGAATAAATGTGATTTGAATTAAATCTGAAAATCTTCTCTGGATTTGGTGAGTGAAAGCAATAAAGAGGGTGGGTGGGTAGTATGTAAAAGAGTTAAGAGGAGATAAAATTATTTTGAATACAAAGGGGTAAATAAAAGTAAAAAGGCTATTTTAGTAAAAGAAACAAAAGAGAAGTGTATATAGCAAAGATTGAGTATGCAAATAGCAAGAGCTAAGGAAAAAAAGAAAAATCAACCCAACTAATTATTCACTTAAATAATTTGTATAACTCTCACCTAATTAATTAATTTTAAATCTTTCTTATACTTTAATATAGCTTTAATTAACTGTCCCACACATATGATCCGATCCCTAATTTTTTTTATCTAAGCTTTTAATTCTTATTATATATATTTTTTAAAATTTTATTGTAATTTACTCACAAATTCTTAATTATTTTGTTTACTAATATTCTTCTTAATTAATTACAATTACCCTTTTTAAACTATTTTACTGGAAATAATATAATATCGATGCAATTCTTAAATTTATCAATTAATATAATAACAAGAAAAAAGATAAAACATCAATTTATGTAATTTTTTAGAAAAAGATGACGCTACACCGTGTTTGAATTTCAGTTGATTCAAACTTTTGAACTATACCAATATGTTTGATATATATATATATATATATACTTTTTTTTTTAATTCAGAAACAAAATTCACCCTAAAAATTTATTAATTTAAAATATAATAAATAGTTTTTTTCTACTTTATTAAATTTAATTCAACTTAATTTTTAACCTAAATTAAAAAAAATAATAGCTTATTAGCGAACCCCAACTCTTAAAACTAAAGATAGAAAAATTACAATCAGTGGCATGTTTTTTATTTTCAATTATTTAAAATATTGCTATCAATTAGTTAGTCTTTTAGTTAATGTTGTTATCATTATTTTTCAGCTACATAGACAAAACAGAAAGTTAATCTTGATGAAAGAAATATTTTTATCAAAAATATATGATCCAATTTATTATTATTTAATTATAAAAAAATATAAAAAACATTTCATTTAGTATTTATGCATTACAATTTCATGTCATACTCCATTGACCTGTAAATTTATCATTTATAGTTGATATCTTGGTATATTTTAAGTTTTTCTCTCTAATTGAACCTTTCAATGTATAACTTAAGCAAACCAGCTCTTCAGAAAGTGATTGCAGTGAATAAAACAAGGAAACAATATCAAGAAAGGGAAGAGGAAGGTGACAAGTGAAAATTAAAGTTGTCTTTTCAATACAGTAAAATAGATTATAATTTATTTAGTAAAAATACATGGATAACACGAGAGTAAAAAATCAATTTAAATGTCTGCCATAAAAGAAAAATGTAAGAGTCAAGAAAAGAAAAATGTTTTTTTTTTAAATTGGTAAATATTATTCATTATAAAAAATAAAGACTAATATTATGCATAAAGAGTCATGTTTAAATTTCCAACAAATCTTAAATGTATTGGATATTTATTTTCTAATATATTTTATTATATATGTTGATATTGAAAAAACTGTTATGCTAATAAGTCTCAGATATTATATTATAAAATGAAGTTATGTTTTTGAGGCAATAAGAATTAAAATTGAAAGAAAGCCAAAAAGAAAATAATTGCTCATCTGATGTGAAGGTATCTATATGATTGCTTGTAGACCACAAGTTAAGAATTCATAGAAAGAGAAAAAAAGAGATATTTTTCCACAAAGTTCTTCTGCAATGAATGTTTGGTAGCACATCTATCTCACTTTTTTAATCTAAATTTTCACCTATGGATTTTGATTTCAGAGAAACAAAACCATCTTAAACCGACCAAGTTTTCTTCTC


Gene Sequence:
>Vu_17544(-)
ATGGCTGCAATATCATGTTCCTATGCCTTCTCCCATGATGTGTTCCTCAGCTTTAGAGGCTCAGACACACGCCATGGTTTTGTTGGGAATCTTTACAAAGCTCTTGATGACAAGGGAATCCATACTTTCATTGATGATGAGAAGCTTCAGAGAGGAGAGGAAATAACACCTGCACTTATGAAGGCAATTGAAGAGTCTAGGATTGCCATCACTGTGCTCTCTCACAACTATGCTTCTTCATCATTTTGTTTAGATGAACTTGTTCATATCATTGCTTGTGCTAAGGAGAAAGGCTTGTTGGTTTTGCCTGTTTTTTATGACTTAAATCCTTCTGATGTAAGACACCAGAAAGGTAGTTATGCAGAAGCATTGACAAGGCATGAGGAAAGGTTCAAAGACAAGAAGGAAAGTTTCAGCCATAACATGGAGAGGTTGGAGAAATGGAAGATGGCTTTGCATCATGTGGCTAGCTTGTCTGGCTATCATTTCAAACAAGGGTACCCCTTTTACCAAACTTTTACTCAAGTTTTGTTTGATTCAGTTACACTTGTCTAATGATTTAGTCAACAGAAAATAGATGTTTGCTAAACATAATGGTTAATGATAGTGAAAAACTCTTTATACAACTAGTGCATAAACTATTTCATCTTTAATCTAACTTCATTGGAACATTTCTGTCAAACAGATATGAATATGAATATGAGTTTATCAGAAGGATTGTTGAGTTGGTCTCTAGCAAGATTAATCGAACTCCTTTACATGTTGCGGATTACCCGGTTGGATTAGAGGCACAAATGGTAGAAGTGATGAAGCTTTTGGATGTTGGAACTGATGATGGTGTTCACATGGTTGGGATCCATGGAATTGGTGGAATAGGAAAAACAACACTTGCTCTTGCAATTTATAATTTGGTTTTTGACCATTTTGATGGTCTGTGTTTTCTTGAAAACGTGAGAGAAAACTCAGACAAACATGGATTACAAAATCTCCAAAGCATTCTTCTTGCAGAGTTGGTTAAAGAAAAGAGAATAAACATAGCAAGTGTACAAGAAGGAATTTCAATGATACAACATAGGCTGCAACGAAAGAAGGTTCTCTTGATAGTAGATGATGTTGACAAGCATGAGCAGTTGCAAGCTATTGTTGGAAGATCTGACTGGTTTGGTTCAGGCAGCAGAATCATCATAACGACTCGAGATGAACAGCTGCTAGCATCTCATGAGGTTAAAAGAATGTATGAGGTGAAGGAATTGAACAAGAAGGATGCTCTTCAATTTCTTACATGGAAAGCTTTTAGAACTGATGAAGCTGATCCAAGTTATGAGGAGGTCTTGAAACGTGTGGTAGCTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTTTGGAAAAGGTATAGAAGAATGGAAATCTGCGATCAAACAATATGAAAGAATTCCTAATAACCAAATCCTGAAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAGAAGAATGTTTTTCTTGACATTGCTTGTTGCTTCAAGGGATATAAATTGGAAGAGGTCCAAGATATACTTCATGCACATTATGGTGATTGCATGAAATATCATATTGGGGTGCTAGTTGATAAATCTCTCTTAAAGTTTAATATGCAATGTATGATGGTGACCATGCATGACTTGGTAGAGGACATGGGTAAAGAAATTGTACGAAAGGAGTCACCAAAAGATCCAGGCAAACGTAGCAGATTATGGTTGCATGAGGATATAATACAAGTTTTAGAAGACAACACAGTGAGTGAGATTTTGTTTATCTATTCAGACAATTGTATGCTATGTCATAGTTGTTTGTTTGTTTTTCCTTTATAATATGCATGTTTGATATCTTGCATATATACGAATGAGGCTGAATTCCTTGCATTGACAAGTAAAAATGTTTTCTCTCTAAACTAACACAAAATATACTGTATGTAATTATCATAAAAAGTCTACAAACTTTATCATATTGTCAATGTGTTCTGATTAAATTCTTGGTGGTTGATATGTGCCCTTTTGCATTAACAGGGAACTAGTGAAATTGAAATCATACATTTGGATTTTCCCCTACTTGACAAAGAAGAAATGGTAGAATGGAACAGAAAGGCCTTCAAGAAGATGAGAAACCTCAAAACACTAATTATTAAAAGTGGTAACTTTTCTGCAGGTCCCAAATATCTTCCAAATAGTCTAAGAGTATTAGAATGGTGGAGATATCCTTCACATGATTTACCATCAGATTTTCATTCAAAGAAACTTGCCATGTGTAAATTACCTCAGAGTTGCTTTACATCACATGAGCTGGTTAGCTTATTGAAGGCAAGTTTAACTAGTTCACTTTTCTCATCATGCAATGAATTTACATTAGGATTGTGCATCTGATTCTCTTTTCTTGTTATGCAGAAGTTCATGGGTATGAGATTTTTAAATTTGGACAAAAGCAAATCTTTAACACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAGAAACTTTCATTTCAACATTGTCAGAATTTAACTGCAATTCACAATTCCATTGGCTTTCTATGTAAACTCAAAATATTGAGTGCTTTTGGCTGCACCAAACTCGTGAGTTTTCCACCTATCAAGTTGACTGCTCTTGAAAAGCTCAATCTCTCACGTTGTTACAGTCTTGAAAACTTTCCAGAAATATTAGGAAAGATGGAAAACATAAGGGAACTTCAGTTAGAGTACACAGCCATAAAAGAATTTCCATATTCTTTTCAAAATCTTACACGGCTTCAACAGTTACAACTATCAAACTGTGGAGTTGTTCGATTACCGAGTAGCATTGCTGTGATGCCAGAACTGACTGATCTTATTGGTTGGAAATGGAAAGGGTGGCAATGGCTGAAACAGGAAGAGGATGAAGAAAAAGAGGGATCATCTATAGTATCTTCAAATGTAGAATATCTTTGGGCCTCAGAATGCAACCTGTGTGATGATTTCTTTTCAATCGGTTTCATGATATTTGCTCATGTGAAAGACTTAGACTTATCAAAGAACAATTTCACAATGCTACCTGAATGCATCAAAGAGTTTCAATTTTTAAGGAAGCTTAATGTGAGTGATTGCAAGCTTCTTCAGGAAATTAGAGGGATTCCACAAAGCTTGAAACATTTCTTAGCAACAAATTGTAAATCCTTGACTCCCTCAAGTACAAGCATGTTCCTAAATCAGGTTTGGTTTTGTTTCTAATGCACTTGACTTAGTACTATATAGTGTACTTAATGTCGGAAAACTTATGAGTTCTTTGTGACTATCAGGAACTACATGAGGCTGGAAAAACTCAGTTTTATTTACCAGGAGAAAGGGTTCCAGAATGGTTTGATCACCAAAGTAATGGACCTTCAGTTTCTTTCTGGTTTCGTAATAGGTTTCCTGAGAAGGTTCTTTGTCTTGTTATTGGACCTGTGAATGACTCTGGAATGTTTAGGCCTATGGTAGTCATCAATGGCAATAAATGTTTTCTTGGTAGTGTCTATTTCATGATGGGAATGGATCATACATATATTTTTGATCTTCTAACAATAAAGTTTGAAGATAACTTATATGGAGTTCCTTTAGAAAATGAATGGAACCATGCTGAAGTTAAATACGTAGGTCTGGAAGAGACATCAATCCTTAAACAAAGTGGAATTCATGTTTTCAAACAAGAAAGTGGCCTGGAGGCTGTTTGGTTTTCTGATCCTTATGGCAAGAGAAAATTAGAAGATGATCTCAATAGTTTTGAATCACAAAATCAACAACTGCTAAAAAAGCATAGGTTTGTGGACATGGAAGCTTATACATGA