Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17537 LG4 37061050 37062514 PREDICTED: transcription factor MYB30
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 37061066 5_prime_UTR_variant
C/G 37061112 5_prime_UTR_variant
G/T 37061159 5_prime_UTR_variant
C/T 37061240 synonymous_variant p.Tyr27Tyr
T/A 37061596 intron_variant
C/G 37061656 missense_variant p.Ala92Gly
C/T 37061667 missense_variant p.Pro96Ser
T/C 37061798 synonymous_variant p.Ser139Ser
A/T 37061838 missense_variant p.Met153Leu
A/G 37061879 synonymous_variant p.Lys166Lys
C/G 37061921 synonymous_variant p.Ser180Ser
T/C 37061930 synonymous_variant p.Asn183Asn
C/G 37061939 synonymous_variant p.Ala186Ala
C/G 37061969 synonymous_variant p.Pro196Pro
G/A 37062143 synonymous_variant p.Leu254Leu
T/A 37062406 3_prime_UTR_variant
C/A 37062410 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17537.1
MGRPPCCDKGVKKGPWTPEEDIILVSYIQDHGPGNWKAVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLNKLEASGSEGSSGHGGVSVSQPMSRGQWERRLQTDIHMAKKALSEALSPKKTSSTFLAELNSNLSNDNSTASFYNSTKPTPSISYASSADNIARLLKGWMKSTPKRAATQNSIINLACAGADTASSEGTTKGSSTSVELSETFETLFGYESLESSNSEFSPSLSPEGTLFQDESKPDITGIDVPFSLLEKWLLDDSGCQEKLSF*


CDS Sequence:
>Vu_17537.1
ATGGGAAGGCCACCTTGTTGTGATAAAGGTGTGAAGAAAGGACCTTGGACTCCTGAAGAAGATATCATTTTGGTGTCTTACATACAGGACCATGGTCCTGGCAATTGGAAAGCTGTTCCTACCAATACTGGGTTGTCAAGGTGCAGCAAGAGTTGTAGACTTAGATGGACTAATTATCTGAGGCCAGGAATCAAAAGGGGTAACTTCACTGAACAAGAGGAGAAGATGATAATCCATCTTCAAGCACTTTTAGGGAACAGATGGGCTGCCATAGCTGCATACCTGCCACAAAGAACAGATAATGACATAAAGAACTACTGGAACACCTATCTGAAAAAGAAGCTGAACAAATTGGAAGCAAGTGGTTCTGAAGGAAGCTCGGGGCATGGTGGGGTTTCAGTTTCTCAGCCAATGTCTAGAGGGCAGTGGGAAAGAAGGCTACAAACGGATATTCACATGGCGAAGAAAGCTCTCAGTGAAGCTCTTTCACCAAAGAAAACATCATCTACTTTTTTAGCTGAGTTAAATTCAAACCTTTCCAATGATAATAGCACTGCCTCCTTCTACAACTCCACAAAACCAACACCCTCCATAAGCTATGCCTCTAGTGCTGACAACATAGCTCGTTTGTTGAAGGGGTGGATGAAAAGCACACCAAAACGTGCTGCCACTCAAAACTCCATTATCAACTTGGCTTGTGCAGGAGCTGACACTGCTTCCAGTGAAGGAACAACAAAGGGAAGCTCAACCAGTGTGGAGTTGTCTGAGACTTTTGAGACCTTGTTTGGTTATGAGTCTTTGGAGTCTTCAAATTCTGAGTTTTCACCTTCTCTTTCTCCTGAGGGCACTCTCTTCCAAGATGAGAGCAAGCCTGATATTACTGGAATAGACGTGCCTTTCTCTTTGCTTGAGAAATGGCTTCTGGATGATTCTGGTTGTCAAGAGAAACTTAGCTTCTAG


Promoter Sequence:
>Vu_17537::LG4:37059050-37061050(+)
ACCTAACCGACTGAATTTCACATGAAAATAGAAATTTAAATTGACTTTCATTCTTTGTAAGCAAAACCTTATTAAATGCATCAATAAATATTTTATTGGAATGATATTTCAAATTTAACTCAATTCATCATCAAAATTACCCTTAGCATAGTGTTTTAAATGCACTTGGACATATTCATGTGCACCTCCTTCTATATAAAAAAAAGACAAACACTAACAATCACATACCATCTCTACCACCTATTTTTTAAGCACAATTTTTCCATTGAATTATTCTTTAAAAGAAAAAAATCTTGTTGGATATGGTAAAATATAAAGAAATTTAAAGCATTTAACTCTATTTAGCTTCATTATTTTCTTATTACTATTAGGTTTACATTCAAACATTATTTTCAATAAATATAAGTAAAAAATATATGTATAAATGAATAAAACTGAATAAACTTAATAATATATATTCCTAAATTTAAGTGAGAGTTCCAACAATGCTTATTTACAAGATAAATAAATAAATAATTTTTAAAATTGAATTTTAGAATAAAAGAGTATTTAAAAACATGTTGTTGATGTTAATTTACTATTTACACAAGAATGCTTAATGTTAAAAGGTGTGCTGCTATGGTTGCTTACTCTTTCAAATGTCTTTCATAATTTATCATGAATATAACAAAATAAAACCAATTTGACTTGTATTTGGTTTTCCATCACAAACTTGTTTCAACCAATTGTCTACCATCACCATTTATGATCATGTATGTGAACTGTATCAAGGAAAGTTAAATGGATGTAATTTCATTGGCGAAACACCAACTATATCTTACTTTTGAGTATCTTAATATATAATAGTATAAAAGTAATTTTAAGAGAATTAATTATTATATAATATTTATATTTTTAATTTAACAAGAGCAAACTTATAATATTTAGAATAAATAAAAATATAATTCACTTGACTATTACCAACCTAATAAGACTCTCTTCTTACACATTATAGTTTAATATATTTAAAACACCAACACCTATCATAATAAATGATGTTATTCATCATTTGAAAAATCTGGACACATAAAATTTCTTTAGTATAAATGAACTAATTCTATCAACAAGAGAAATTTACCACACCTAATTATAAAACAACAAATGAACTAATACTACATATTATCATCCAAACAAAAATGACCCATTTTAAATAACCAATTAGACATATCCAAAACATTTTTTTTTTCACTTTTCACAGTTATATATAGTATGTATGCACACCAGTCTAAATCACTTTCAAAGAAAAAATTTACTTGAATTAATTTTTTTTTCTTTTTTTAAAACTACCATCACTACAATTTGATACATATACAAAAGATATTTAGTTGAAAACAAAATCTCAATCAAATAAAATTACATTTTGAGTGATAATATATAGTAGCATTAAATAATTTGAAAAACATTGAAATTTAGTATTTGAGACTAATTAAGTAGAGTCTTTTATATCTATATGTATATTAAACATTGGAAGGAGAATTAGATGATTAATGTGAAAAAAGAGGTAAATTATTGATAAGTAATTGAAAGAGAAAGGAGATGGTGAATTGATTGAGAATTGACAAGTGTTGTTGAGAAGCAAACAAAAGAAGTGCATATAATATAATAGTATTAGCAGAAGAGGTATGTGAAAGCTCTTGAGTTTGCAAGAGTCACCACCTTTATCTAATTAACATTAATGTTTGGTTTGATGGGGTTAGAGACTTGAAAAAGTAGTAGAGAACCATTGAATGCTCCCACGCGGTTTTGAGAGGCACAAAGAGAGCCATTGCTCCAAACCTCAGCTGACTTTGCCCTTCTTTCTTCCCTATAACAGTTAATGCTTTTGCTGTCAACTTTTGACTATTTGCCTTCACTTCTTTTTCTTTTTTTCTCTCTCTCTCTTCAGTCAGCGACCCTTCACACACTCTTCTTCCCTTTCTTTTCACTATTTATACACCCTTCATTTTGACTCTTGCCTTGGC


Gene Sequence:
>Vu_17537(+)
CTCATTGCAATTGCAAGCAAGAGGAAATCCAAGAAACACAAGAGATCTAGCTATACTATATACTAAAAGTATAGTGAAGTAAAAGAAAAAGATACACACAACAAGGCAAGATGGGAAGGCCACCTTGTTGTGATAAAGGTGTGAAGAAAGGACCTTGGACTCCTGAAGAAGATATCATTTTGGTGTCTTACATACAGGACCATGGTCCTGGCAATTGGAAAGCTGTTCCTACCAATACTGGTTGGTGAATTTTCCACTTTCAGATCTTAATTTGCTGGCTTTTTGGATGATTCTTCTGTCATGGTTTTAGCAAGTCAGGGAAATTTTTTTGATTCTGGTGATCTGAATGGTACTTTCTTTTTGTGTTTAACTTTCAGGGTTGTCAAGGTGCAGCAAGAGTTGTAGACTTAGATGGACTAATTATCTGAGGCCAGGAATCAAAAGGGGTAACTTCACTGAACAAGAGGAGAAGATGATAATCCATCTTCAAGCACTTTTAGGGAACAGGTAAATTCATCTTACAGCTTCTGCTTAGTTATTGAAATCTGTTAATTACCATATTGTAACCTAAACCTCATTGATTATGATGTAGATGGGCTGCCATAGCTGCATACCTGCCACAAAGAACAGATAATGACATAAAGAACTACTGGAACACCTATCTGAAAAAGAAGCTGAACAAATTGGAAGCAAGTGGTTCTGAAGGAAGCTCGGGGCATGGTGGGGTTTCAGTTTCTCAGCCAATGTCTAGAGGGCAGTGGGAAAGAAGGCTACAAACGGATATTCACATGGCGAAGAAAGCTCTCAGTGAAGCTCTTTCACCAAAGAAAACATCATCTACTTTTTTAGCTGAGTTAAATTCAAACCTTTCCAATGATAATAGCACTGCCTCCTTCTACAACTCCACAAAACCAACACCCTCCATAAGCTATGCCTCTAGTGCTGACAACATAGCTCGTTTGTTGAAGGGGTGGATGAAAAGCACACCAAAACGTGCTGCCACTCAAAACTCCATTATCAACTTGGCTTGTGCAGGAGCTGACACTGCTTCCAGTGAAGGAACAACAAAGGGAAGCTCAACCAGTGTGGAGTTGTCTGAGACTTTTGAGACCTTGTTTGGTTATGAGTCTTTGGAGTCTTCAAATTCTGAGTTTTCACCTTCTCTTTCTCCTGAGGGCACTCTCTTCCAAGATGAGAGCAAGCCTGATATTACTGGAATAGACGTGCCTTTCTCTTTGCTTGAGAAATGGCTTCTGGATGATTCTGGTTGTCAAGAGAAACTTAGCTTCTAGATTTAGTTATAGTTCAATTTGTTGCTTTTTCTTAGTTATAGCAGACTAAACCTGAATCTCACTTTGGCCTTCAACCCCTTTTGGTCCTAGAAGTGTATATTCCAATCCAATATTAACATTATTATATTATTATATCCTATAGTTAGATGTCTTAATGCTAAAGTTTGTTCTCT