Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17502 LG4 36623592 36626568 probable serine/threonine-protein kinase PIX7
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 36624091 intron_variant
G/A 36624128 intron_variant
T/A 36624204 intron_variant
A/T 36624205 intron_variant
A/G 36624832 intron_variant
T/A 36624838 intron_variant
T/C 36625074 intron_variant
C/T 36625075 intron_variant
C/A 36625221 missense_variant&splice_region_variant p.Pro233Thr
G/A 36625319 synonymous_variant p.Ser265Ser
C/T 36625443 synonymous_variant p.Tyr278Tyr
A/G 36625639 intron_variant
T/A 36625823 intron_variant
T/A 36626334 missense_variant p.Cys409Ser
T/A 36626372 missense_variant p.His421Gln
T/A 36626376 missense_variant p.Tyr423Asn
G/A 36626461 missense_variant p.Ser451Asn
T/C 36626520 missense_variant p.Trp471Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17502.1
MGFGSNAVQAGSLDVDKSKGRKNKEGGVKERKWGFRFSIFGSCIPSKSKVDSTKVSGTSAPNNGENVKSAVTESEENKSASDRITKETVAPPESSTTTSDAESNPSTPIFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLVGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHQEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKKRPNGEHNLVEWARPVLGDRRMFYRIIDPRLEGHFSVKGVQKAVQLAAQCLSRDPKSRPLMSEVVQALKPLPSLKDMAISSYHFQIARVDRTMSMPNHKNGIRTQIVSVSRKGQPVRTLSSSNVPHGSPYIRYTKSPKPTG*


CDS Sequence:
>Vu_17502.1
ATGGGGTTTGGGAGCAATGCAGTTCAAGCAGGGAGTTTGGATGTGGACAAGTCAAAGGGCAGGAAGAACAAGGAAGGTGGTGTGAAGGAGAGAAAATGGGGGTTTAGATTTAGCATCTTTGGGAGTTGCATACCTTCAAAATCAAAAGTTGATAGCACAAAAGTTAGTGGCACTAGTGCCCCTAATAATGGTGAAAATGTCAAGTCAGCGGTAACTGAATCAGAGGAAAACAAATCTGCATCTGATAGAATCACAAAGGAAACGGTTGCTCCTCCGGAGTCCTCTACCACAACAAGTGATGCAGAAAGTAACCCTTCCACTCCAATATTCAGTGAGGAGTTGAAGGTTGCTTCTTGCCTGAGAAAATTCACATTCAACGGACTTAAGGTGGCCACAAGGAATTTTAGACCAGAGAGTCTTCTTGGTGAAGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTGAAACCAGGTACCGGGCTTACGGTTGCGGTCAAGACCCTCAACCACAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAGTTAAATTATCTTGGTGATCTTGTCCATCCAAATCTTGTTAAACTGGTTGGTTTCTGCATTGAAGATGACCAAAGATTACTGGTTTATGAGTTTATGCCCAGAGGCAGTTTGGAAAACCACCTCTTTAGAAGACCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAGGGTCTTGCTTTTCTCCACCAAGAGGCTCAAAGACCCATAATATATCGTGATTTCAAAACATCTAATATACTATTAGATGCGGAATACAATGCCAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCTGAAGGCGAAAAGACACATGTGTCAACAAGAGTTATGGGAACTTATGGTTATGCAGCCCCCGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTACTACTTGAAATGCTCACCGGCCGGCGATCAATTGACAAGAAGAGACCAAACGGGGAACACAATCTGGTGGAGTGGGCAAGACCTGTTCTTGGAGACCGGAGGATGTTCTACCGGATAATCGACCCCCGCCTGGAAGGCCACTTCTCGGTTAAAGGGGTACAGAAAGCTGTGCAGCTTGCTGCTCAATGCCTTAGCCGTGATCCAAAATCCAGACCCTTGATGAGTGAAGTTGTTCAAGCTTTGAAGCCTTTACCAAGCCTCAAGGACATGGCTATCTCATCTTATCACTTCCAGATTGCGCGAGTCGACCGAACCATGTCGATGCCGAATCATAAAAATGGCATCAGAACACAGATAGTATCTGTGTCAAGGAAGGGTCAACCTGTAAGGACATTGTCTAGTTCAAATGTTCCACATGGTTCTCCATACATTCGATATACCAAGTCTCCAAAACCTACTGGGTAA


Promoter Sequence:
>Vu_17502::LG4:36621592-36623592(+)
CAAAGATGTGCAACGATGAGTTATGGTTATAATGTTGAGATCTCACACATTGGAAAAGGAGCAAAGGAGGAGATGTCTCATTGACACTGGCAAAGGCTACATTTATCGACGACAACATTGCCAACGTCTTGGCTGGGTAAAATAGGCCCTAGCATAGGTGGAGGAGGTGTTGCTTCTAGGTGGTTGGAGGTTTCTTATAGCACCATCTACTGTATCACCACCAAAGTCTTCCACCCATCACTCCACCTCTTCGTCACCAATAGTGCCAGAACAAATCACATCAACCTCTATGAGTTTTACCGTCGCAACATCTCGGTTGTTTTCGTTTATGGGTGGCCTTTTTTGCTACAAATGCAAAAAACCTTAATCAACTCCTGAAGAAACTTTATTTTTTTCTTAAAGTGTTAATAAAAGTTGGTGTGAATTTTATGAAATATATAATTTTTATTCAAAATAATGAACTTCAACACGTGACGACCACATATCGCTATATGTGACAACTTATGTGAAATGTCATTTGTCATGTGGGATAAAATTTAATGCTATTGAAAATGATGTACTAAAATCATTGCTTTTGAAACAAACCGAATCAAAGTTTCAAATATGATCTATTTATAAATTTTTGTGATGATCGATGGAATAAAAATATAATTAATCTTAACTAACTTGAGAAAGATTGACTTTATATTTTATAGAAAAAAAAAGAAAAAAATAACAATAAGAGATGGAGAAAGGTGAAAGAAGGAAAAAAAATCAGAAGTAAAATATCTAAATTCTAACATATGAGATTGTTGCAAATGACATTAATTATTGGAGAGATCAAATTAATTTTATTTGAAAAATAAAAACTTAAATAAATAAAATATATAAAAACATAAATAAATAAAATATATAAATAACTCAAACTTAAAAGTTAAATCTATTTTTTTATATATTATTATACTTAATCATTTCAACCTAACAAACAACAAAATGTAATTATTAACTTCATCACAAATAGCACCCACATACCAAAAATGAATACATTTGATTTGTACTTTCTTACACCATAATATTTTAAATATTTTAAGTTGAAAGTTATATCCTAAATTACTCATCAAATTCATGCCTTTCAAGTTCTAGCTCCCTATGTGGCCTGAAAAATTTACTTCAACCAACCTTGATATTCTAATTAAATGAAATTATATCACACATTTTTTAATACTCAATTTAGAAGAAACCAGAAAAAGAAAAAAAAGAAAAGAAAAAAGAATAGTTGGAAGAGCATGTATGAAGCAAAATGAGGATAGCCTAAGGATGACCCTTTGCATAATGATTTTCCACAAGGAAAAAACAACGTTATCTGTGGAATAATTTAGAGAGCAAAGTGAAAGTCATATGTCGTAGGTTCCAATTTACCAAGTGGCACTGCTCTGTGCTGTTTTCAAAAAGCAAAAAGAAAAATGCCTGTTACTTTCTCTCTCTTGCCCGCACTGCCCCACTTCCCCACTTTTCACGTTTTCAAGCCTGCCCGACCTGCCCGCTGTGGAAAACCTTTCCCTCTGTCACAAGCACTCTCCCGCTTTCCTCTTCATTCTTCAACACAACACCAACTCCCTCCCTCTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTCTTTGCTTTGGATTTTAGACTCACTTCACAACTTGGTTTTTGTCTGTGACTTTGTTTTTGTGCTGTGTTGGTCTCAGTCATTCATCTGTGTTCATGTGTTTGTTCATCTTTTACAACATTTAATGCCATGCAATTGTTTTTTTCGCTAGCTCCATATTGTTCAATCAGTAGTTTCTAGCTTTGTGTCTAACATGTTTTTGAGAGATTAGTCTCTGACTTTTGACCCAGAGATATATCTTGAGTTCACCCAAAGGAAAGTTGTTCAATTATTTCTAGCTTGAAGTTGAAGTGGCTTTGTGTAACAATTTTGAGACTTTGGTGCATGGAGAGTTGTTTGTGAGAGTTTTTGGAAGA


Gene Sequence:
>Vu_17502(+)
ATGGGGTTTGGGAGCAATGCAGTTCAAGCAGGGAGTTTGGATGTGGACAAGTCAAAGGGCAGGAAGAACAAGGAAGGTGGTGTGAAGGAGAGAAAATGGGGGTTTAGATTTAGCATCTTTGGGAGTTGCATACCTTCAAAATCAAAAGTTGATAGCACAAAAGTTAGTGGCACTAGTGCCCCTAATAATGGTAATTTTCTTTCCTCATTAATTTCCTTAGTTTCATGAAAATATGTTCTATTTGTCATTTGTCATTAATTTTAGGTGGCCAACATTGGCTGTGTGTCTTTACTTTTTGGGTTGTACGATCTGCCCACCAAACCCTTTTTGTGAGTGTGAATCTGTTTTGAGAAACTAATGAATTCTGATTTCTGACAATAACACTGATTTGAGTTATTATTGTGCATTTTTGTTGAGTATGTCGAAGATCTAACAAATTCATTTAGAAATAATTAAAGGCTTTCAAAGACAGATTCTTTTCTGCATTACCTTTTGACCACAGCATGTTTTTTCTGTAACCACTGTCTGCACTTGATGTTGGGAAAAAGAGCCAAGAAATGTATTTTGTAAATGATATCTAATTGTTCTGACAATTGTGAGATAAGACTTTGTTATTGTTGTACCCTGAGAATGATTATCCAATGATTCAATCATATAAGAAGTTATAAAAGTTGACCGGCTCATGGTTTATATTCTGACTGACACGAACAACTTTGCATTGATTGCATTTACTATATTGGTCTTATACAAGTGTAGTGAAATTGCAATGAAGTTGTTTAAAGTCAAGAATGGTATGATGAAATCATGTGTAATAGTGTTCATTTGCTCTTATTTTTAGGTGAAAATGTCAAGTCAGCGGTAACTGAATCAGAGGAAAACAAATCTGCATCTGATAGAATCACAAAGGAAACGGTTGCTCCTCCGGAGTCCTCTACCACAACAAGTGATGCAGAAAGTAACCCTTCCACTCCAATATTCAGTGAGGAGTTGAAGGTTGCTTCTTGCCTGAGAAAATTCACATTCAACGGACTTAAGGTGGCCACAAGGAATTTTAGACCAGAGAGTCTTCTTGGTGAAGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTGAAACCAGGTACCGGGCTTACGGTTGCGGTCAAGACCCTCAACCACAATGGACATCAGGGTCACAAAGAGTGGCTTGTATGGAACTTATATATCCTTCTCAACTTCTACATTTTCATTCATGTTGTTGTTATAGCTCATATGATGCTAACATTCTCAATTTGTCTTTGCTTCTTCTCAGGCTGAGTTAAATTATCTTGGTGATCTTGTCCATCCAAATCTTGTTAAACTGGTTGGTTTCTGCATTGAAGATGACCAAAGATTACTGGTTTATGAGTTTATGCCCAGAGGCAGTTTGGAAAACCACCTCTTTAGAAGTAAACTACTAACCCTTTTTATTTCTCTGGTAAATCTTTTCTATTTCTATAGCATGCATATAGAAAACAAAAGCTAAAGTAAAATGGTTCTCTTCTCATAATGCATTTGTTCTTTCTGATAGGCATGTGCTCTGTGCATGATTGTTTTTCTGGTAACAACCATTTGTTTTGTTGAAGGACCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAGGGTCTTGCTTTTCTCCACCAAGAGGCTCAAAGACCCATAATATATCGTGATTTCAAAACATCTAATATACTATTAGATGCGGTATGTAAGTCAACTGGTCAAGAAAGTATTTATTGTTTCATATTCATTCTCCAACACAGAAAATAAAAGCAAAAATGTTCGCAGGAATACAATGCCAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCTGAAGGCGAAAAGACACATGTGTCAACAAGAGTTATGGGAACTTATGGTTATGCAGCCCCCGAGTATGTGATGACTGGTGAGTTTTGAGCCTTCCCTATTCCTTTTCAATTGGTAACATTTCTTAAACTCAGTACTTTCACTGTATAACTTACTATGAAGATAGCTTATGTTGTCTAGAATTTGCACTTGCACTCTAAAAGCTTTTCTGTTTTATAAGTTCTTGGACTATCATGATTCCTTTATGGATAAAACCCTCAGTTTGATCCTTCAAAGTTATAGTCAAGGCCACATTACATGAAAATATCATTGAAATGCAAGATGTTCAATCCAAACCATGTAGAAGAAAAAAGGGGAAGGGGTCACCAATGATCTTTAAAAGTTTCATATTAAGTTATTGAATTATTTTTTCAAAATGTGTGATCTTTATCTTAAACTCAAGAAGTACCATGATGAAATAGAAAGCAAGATAGTTACCTCAGGTCTTGCCTACTGCTCTAACTGAAAAATTGTTACCCAATGATTGTATTTACATGTTTTGTGCATAGATGTATACTTACGGTCCAATTCTTATTAGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTACTACTTGAAATGCTCACCGGCCGGCGATCAATTGACAAGAAGAGACCAAACGGGGAACACAATCTGGTGGAGTGGGCAAGACCTGTTCTTGGAGACCGGAGGATGTTCTACCGGATAATCGACCCCCGCCTGGAAGGCCACTTCTCGGTTAAAGGGGTACAGAAAGCTGTGCAGCTTGCTGCTCAATGCCTTAGCCGTGATCCAAAATCCAGACCCTTGATGAGTGAAGTTGTTCAAGCTTTGAAGCCTTTACCAAGCCTCAAGGACATGGCTATCTCATCTTATCACTTCCAGATTGCGCGAGTCGACCGAACCATGTCGATGCCGAATCATAAAAATGGCATCAGAACACAGATAGTATCTGTGTCAAGGAAGGGTCAACCTGTAAGGACATTGTCTAGTTCAAATGTTCCACATGGTTCTCCATACATTCGATATACCAAGTCTCCAAAACCTACTGGGTAA