Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17338 LG4 34448410 34452156 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 34448597 missense_variant p.Ile566Thr
A/T 34448635 synonymous_variant p.Val553Val
T/A 34448703 missense_variant p.Arg531Trp
T/A 34448766 missense_variant p.Asn510Tyr
A/G 34448769 missense_variant p.Ser509Pro
G/A 34449129 downstream_gene_variant
G/T 34449138 downstream_gene_variant
T/C 34449161 downstream_gene_variant
A/G 34449195 downstream_gene_variant
T/C 34449214 downstream_gene_variant
G/A 34449228 downstream_gene_variant
G/A 34449235 downstream_gene_variant
A/C 34449267 downstream_gene_variant
A/C 34449270 downstream_gene_variant
G/T 34449271 downstream_gene_variant
A/G 34449275 downstream_gene_variant
C/T 34449376 downstream_gene_variant
C/G 34449648 downstream_gene_variant
C/G 34450042 downstream_gene_variant
T/A 34450054 downstream_gene_variant
A/G 34450058 downstream_gene_variant
G/T 34450377 downstream_gene_variant
G/A 34450440 downstream_gene_variant
A/G 34450443 downstream_gene_variant
C/T 34450450 downstream_gene_variant
G/C 34450461 downstream_gene_variant
C/G 34450526 missense_variant p.Val363Leu
A/T 34450541 stop_lost p.Ter358Argext*?
G/A 34450595 missense_variant p.Arg340Trp
T/C 34450606 missense_variant p.Glu336Gly
A/T 34450877 downstream_gene_variant
C/T 34450968 downstream_gene_variant
T/G 34450973 downstream_gene_variant
G/A 34451032 downstream_gene_variant
T/C 34451038 downstream_gene_variant
A/G 34451065 downstream_gene_variant
C/G 34451164 downstream_gene_variant
T/A 34451218 downstream_gene_variant
T/A 34451226 downstream_gene_variant
T/A 34451234 downstream_gene_variant
C/G 34451570 missense_variant p.Gly196Ala
A/G 34451599 synonymous_variant p.Asn186Asn
C/G 34452020 missense_variant p.Gly46Ala
G/T 34452085 synonymous_variant p.Thr24Thr
C/A 34452124 missense_variant p.Lys11Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17338.1
MAFKCHSNQCKIAAFDVVILAVATLLCFSHSAVSDPRISEVGLYCGTHRASPSGNYVPVFTKEMGRLQELVSKNNWGTHSEEPSSTSPIYGLAQCFQDLSNIDCLQCFAASRTKLPRCVPSVSGHIYLDGCFLRYDNYSFYSEDTDPLRDTVNCTTQYGGVAGEAEVVFGKSVGKVVENVVRVAVNEGRGFAVGEGEGVYALAQCWKTVGEKGCGDCLKKAGNEVRGCLPKKEGRALNSGCYLRYSTVKFYNQGGEHGDGDEKDFIEIPSYLKNSSLNYKYETLEKATDYFSTPRKIGQGGAGSVFKGTLPNGKDVAVKRLIFNNRQWVDDFFNEVNLISGINHKNLVKLLGCSIEGPESLIVYEYLPNKSLDHFIFEKDKTRILKWKQRFEIIVGIAEGLAYLHGGSEIRIIHRDIKSSNVLLDENLNPKIADFGLARCFGADKTHLSTGIAGTLGYMAPEYLTQGQLTDKADVYSFGVLVLETASGRKNNVFREDSGSLLQTIWKLYQSNRLAEAVDPCLGDEFPEREASRVFQIGLLCTQASASLRPSMAQVACMLSNSNLDVPIPKQPPFLNSRLLSQTAPLGFSIDNSSSNTFQKIGVSYSPSQSSSSCSLIRPSKSEETILEA*


CDS Sequence:
>Vu_17338.1
ATGGCTTTCAAATGTCACAGCAACCAGTGCAAGATTGCAGCTTTTGATGTTGTTATCTTGGCAGTGGCCACCCTCTTGTGTTTCTCACATTCAGCAGTGTCTGATCCAAGAATCTCTGAAGTGGGGTTGTACTGTGGCACTCACAGAGCATCACCAAGTGGTAACTATGTCCCTGTTTTCACCAAAGAAATGGGAAGGCTTCAAGAGCTTGTGAGCAAAAACAACTGGGGCACTCATTCTGAGGAACCGTCATCAACCTCTCCGATCTATGGTTTGGCACAGTGCTTCCAAGATCTTTCCAATATTGATTGTCTTCAGTGCTTTGCAGCCAGTCGCACCAAGCTTCCTCGCTGCGTGCCTTCCGTTTCTGGTCACATTTACCTTGATGGTTGCTTCCTTCGCTATGATAACTACAGTTTCTACTCTGAGGACACTGACCCTTTGAGGGATACAGTGAACTGCACCACACAGTATGGTGGTGTGGCTGGTGAGGCTGAGGTGGTGTTTGGCAAGAGTGTTGGGAAAGTGGTTGAGAATGTGGTGAGGGTGGCAGTGAATGAGGGAAGAGGGTTTGCAGTGGGAGAAGGTGAGGGAGTTTATGCTTTGGCACAGTGCTGGAAAACTGTTGGAGAAAAAGGGTGTGGTGATTGCTTGAAGAAAGCTGGAAATGAGGTTAGAGGGTGTTTGCCTAAGAAGGAAGGGAGGGCCTTGAATTCTGGCTGTTATTTGAGATATTCCACTGTTAAGTTCTACAATCAAGGAGGTGAACATGGTGATGGAGATGAAAAGGACTTCATTGAGATTCCCTCTTATTTGAAGAATTCTAGCTTGAATTACAAATATGAAACTCTTGAGAAGGCCACGGATTATTTTAGCACTCCAAGAAAAATAGGCCAAGGAGGAGCTGGTTCTGTGTTCAAAGGGACTCTCCCAAACGGGAAAGATGTTGCTGTTAAGAGATTGATCTTCAATAATAGACAATGGGTGGATGATTTCTTCAATGAAGTGAATTTAATCAGCGGAATAAATCACAAGAACCTTGTCAAGCTATTGGGTTGCAGCATTGAAGGCCCTGAGAGCCTCATTGTGTATGAATACCTACCTAACAAGAGCTTAGACCATTTCATTTTTGAAAAGGACAAAACAAGGATTCTAAAATGGAAGCAGAGGTTTGAAATAATTGTTGGAATTGCAGAAGGGCTTGCATATCTTCATGGAGGCTCTGAAATAAGAATAATCCATAGAGACATCAAAAGTAGCAATGTTCTTCTTGATGAGAATCTCAACCCCAAGATTGCAGATTTTGGTCTTGCAAGGTGTTTTGGTGCTGATAAAACACATCTAAGCACAGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTATCTTACTCAAGGACAACTTACAGATAAAGCAGATGTTTATAGTTTTGGAGTGCTTGTTCTAGAGACTGCAAGTGGCAGGAAGAACAATGTCTTCCGTGAGGATTCTGGTTCTCTTTTGCAAACAATTTGGAAACTTTACCAATCAAACAGATTGGCTGAAGCTGTAGATCCATGCTTGGGAGATGAGTTTCCTGAAAGAGAAGCATCAAGGGTGTTTCAAATTGGATTACTGTGCACACAAGCTTCTGCTTCCCTTAGGCCATCCATGGCTCAAGTTGCTTGCATGTTAAGCAATTCAAATTTGGATGTGCCTATACCAAAACAACCTCCATTTTTGAACTCTAGATTACTCAGTCAAACAGCTCCTTTAGGTTTTAGCATAGATAACTCCTCATCAAACACATTTCAAAAGATTGGCGTGTCTTATAGCCCCTCTCAGTCTTCTAGTTCATGCAGCTTAATTAGACCATCCAAAAGTGAAGAAACAATTTTGGAAGCTTGA


Promoter Sequence:
>Vu_17338::LG4:34452156-34454156(-)
AAAAGTAGATAAACTAAAGCTAAACTTAATTTATTTTAGTGAAACCAAAAATTAAATTTGGTTAAAAAAATTTAATAATTTTATTCTTATTTTCATATTATTCAAACTTGTCATGTATGACTTTGTTCTGCTTCAATTCTTATTAAGAAATCTACGTATATTCTACTCAAGTCCACTCACATTCTTCATTGAAACAATTTCTTCTTTTAGGGTCAACTTTTAACCAATAAAATTATATAAATTGTGAGAAATATTTATTGAGTAATTCAAATCCAAAATTAGCCCAAAAGAAAAGGTCTATTTAGCAATTAGTCAAACATCCAATCACATTTTAAGGAGTAAAATGGAAATATGTTATTTTTATTCTTAAAATCTTGTCTATTCAAACATTCTAGAAAGCATGTTAACTTGCTCCATAAGAATATAATTCTCAAAAGTTGTAAAAATTGCATGTTGACATACAAAACAAAATACTAAAAATAAATAGTTGACAAAAAAGATTGACCTCAGTTGCAATAAAGATGATCATAATAAAGTTGATTAATTAGTTAAGTCAGTAGCATTAAATTTTTTTAAAATTGAATTATTTTCCGAAAAACATCATTAAATAATTTATACTAATAATAGAATTTTTGTTTTTTAAACTATATTCTTTAATATGTAGTGAAAAAGACCATTTATAATTTATGAATAAAATTAATTAAAGACACTTCAGATTAATTAATATAAGCACCAATTAAAAAAATTAAAATAAGACAGCCAAAAAACAAAAAAAAATTATGTTTTATATTTAAAAGGAGAAAACACGTTTGTATTAGATAATTATCATGGTTCGTCACCAATGATTTCTGTTTAGTTCCAAAGTGTATTGAAGAGTCAAATCAATATCTTAAAAAAAGTGCAATATTCCCTTTGACAACTCCATAAAAGCTATTACACGATTTTTCTCCCTTTTTCTAGAAGGAAAACTAAATTAAATTTGTCAGTAGTACTTGACTTTAATTTAAATAAATTAGTAAATAAAAATCATAATTTACTATTCATCTATATGCTTTTAAAGTTATTTTTTAATAAGATAATTTTTCTATCAAATTAAAAACATAATTTTGTCATTTCTATATAAAAAAATAATCATACAATATCTCAAATGAAAAATAATCACATAATTATGTAAATTTACAAATGGTCTTATTTTATTTACCACAAACTATAAAATCTCTTTTTCTTGACCCTGTATATATATAGGCAAAATTTAGTTGAAAGGGAGAAAATTTTACAGTCATATTACTAATTAAATATTAAAAAATTGCATAATTTTTTTAAAAAATAAATATTTCGTAATTATTGATTACAATTTGTTAAAAATAGCAAAAATTTTATGGATTTTACTTATTGTTTGAACAATTTTATATAATTCCCAGTAAATTTACCAAAAAATTGTCAGAAAATCTAAAACCTTGGATACTATTAGAAACCATTATTAATAATGAATGTTTGATGTGCTTGGTTTGAACATTCCACAAGTGACTATGCTGTCACAGTGATTATGTTAGAAACTGAAGCAAACGATGACAGTAACACAAGAACAATGAAAATTCAAAGGTGCCAAAAACACGCAAACTTTCTCTCTCTGTCTCTGTCTCTCTCGTTGCCTTTTCTTTCACTCAAAATCAGAAAACACACAACAAGAAGAAGACTCAACAATTTCTTGCAGAACATCAACAAGAAAGCTTTGTAAAAACAATCAATAGCTGCAACTTGAAGATTTTTTAAGTCTGAGTGATCAATCACAACCATATTTGTGACTGTATCAATCAAAGATAAGGACAAAACTACGCAAATGTGACAGCATCAGTAGTATTTGTCTATAATTTTCAGCAATATCAAAGATTAGACACATGTGACTGTATTATTATTAGTCTTGTTTTCTGCAATATAAAGAATCAGTAGGAAATCAAGAACATAACCAAACCGGTTTGAAGGATTTGATAACAAGCATC


Gene Sequence:
>Vu_17338(-)
ATGGCTTTCAAATGTCACAGCAACCAGTGCAAGATTGCAGCTTTTGATGTTGTTATCTTGGCAGTGGCCACCCTCTTGTGTTTCTCACATTCAGCAGTGTCTGATCCAAGAATCTCTGAAGTGGGGTTGTACTGTGGCACTCACAGAGCATCACCAAGTGGTAACTATGTCCCTGTTTTCACCAAAGAAATGGGAAGGCTTCAAGAGCTTGTGAGCAAAAACAACTGGGGCACTCATTCTGAGGAACCGTCATCAACCTCTCCGATCTATGGTTTGGCACAGTGCTTCCAAGATCTTTCCAATATTGATTGTCTTCAGTGCTTTGCAGCCAGTCGCACCAAGCTTCCTCGCTGCGTGCCTTCCGTTTCTGGTCACATTTACCTTGATGGTTGCTTCCTTCGCTATGATAACTACAGTTTCTACTCTGAGGACACTGACCCTTTGAGGGATACAGTGAACTGCACCACACAGTATGGTGGTGTGGCTGGTGAGGCTGAGGTGGTGTTTGGCAAGAGTGTTGGGAAAGTGGTTGAGAATGTGGTGAGGGTGGCAGTGAATGAGGGAAGAGGGTTTGCAGTGGGAGAAGGTGAGGGAGTTTATGCTTTGGCACAGTGCTGGAAAACTGTTGGAGAAAAAGGGTGTGGTGATTGCTTGAAGAAAGCTGGAAATGAGGTTAGAGGGTGTTTGCCTAAGAAGGAAGGGAGGGCCTTGAATTCTGGCTGTTATTTGAGATATTCCACTGTTAAGTTCTACAATCAAGGAGGTGAACATGGTGATGGAGATGGTAAGAGTGTTGTATTGTACTAGTTTGAAGTTTTCATATCAAAATCTTCTATCATGCACTTTCAATACTTCCACTGCTTATAGAATACATGATAAGGGAAAGAAGATGGAGTTGAATTTGTTATTCTATCATTGTGACAGAAATGCAGCATTTCAGACACTACCATAACAGTTCCTAGATTTAATTCATAGATGACAGATTCATGTTAGTCATTTATTTTACACACATGTTGATGCCATTGTCCATGTTCTCATTTTTCAGATTCTTCTAGAAAAAGAACCATCATTACAGCAGTCTCAGTCTTGGCTGCAGTTGTTGTAGTTCTCTCTCTCTTAGTCTCCTATGTGGCCTTCACCAAAAAGAGAAAAAGTAAAGTTCTGTAGAACACTATTGTCTTAAAAATTGCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCATTTCTCTATTTAGAATGATTGTCTGTTAATTTTTCTGATGCTGGATTTCATATTCTCCTGATCCAATCAGAAAAGGACTTCATTGAGATTCCCTCTTATTTGAAGAATTCTAGCTTGAATTACAAATATGAAACTCTTGAGAAGGCCACGGATTATTTTAGCACTCCAAGAAAAATAGGCCAAGGAGGAGCTGGTTCTGTGTTCAAAGGGACTCTCCCAAACGGGAAAGATGTTGCTGTTAAGAGATTGATCTTCAATAATAGACAATGGGTGGATGATTTCTTCAATGAAGTGAATTTAATCAGCGGAATAAATCACAAGAACCTTGTCAAGCTATTGGGTTGCAGCATTGAAGGCCCTGAGAGCCTCATTGTGTATGAATACCTACCTAACAAGAGCTTAGACCATTTCATTTTTGGTACCCTTTCTCTCTATTAATCAAAATATTGTGCTATGTTTTCAATTAGTTTCTTACTTGAGTTAAATATCTGGTTAATTTGTTGGGAATCCGTGAATCCAAGTCCTACATTCGATAGAAATGCTAAATTAGAACATTATATAAAAGTGAAAGACCCATTAATCCATTGTCTTAAGGTTTTTAAGGTTTTTGGTAGAGAGTAATGTCAATTCCTTACGTGTGAGTGGGGTGAGATTTCATACAAAGTTCATCCTTTTTTCTCCTCAAATTAAAATCTCTTTTTTAATCCCTTATTTATGAAAGTGTCATATACATGGTGTTTTGTTTTTCATAAGAATTAGTCCGTTTTTTGATTTCATAAGATCAACCTCTTTGATGCAAATAGTGAAGGAAGGGCAAGAGAAAATCAAATTCTTATGTGCAGTTTCAGTAAGGTGATAGACTAATTTGCTTTGCAGAAAAGGACAAAACAAGGATTCTAAAATGGAAGCAGAGGTTTGAAATAATTGTTGGAATTGCAGAAGGGCTTGCATATCTTCATGGAGGCTCTGAAATAAGAATAATCCATAGAGACATCAAAAGTAGCAATGTTCTTCTTGATGAGAATCTCAACCCCAAGATTGCAGATTTTGGTCTTGCAAGGTGTTTTGGTGCTGATAAAACACATCTAAGCACAGGAATTGCTGGAACACTGTGAGTCTTTGAGTTTAACACATCACATCATGCATGAAAGGTTCAAACCTACATTTTCAAATGTGCATATCACTTCATGATATGTAATGTATTGTAATAGGAAAACACTGTTATCGTATAAAGAAACCATTCAAGAAAAAAGCATGAGCTGATAATTGAAACTGTGTAGTTTTTATGCATTTTGTTAACAGGTTTCTTGGTTTTAAGTGACACCAGTTCTTTTTTTCTGTCCATTTCATGGAGCAGAGGTTACATGGCTCCTGAGTATCTTACTCAAGGACAACTTACAGATAAAGCAGATGTTTATAGTTTTGGAGTGCTTGTTCTAGAGACTGCAAGTGGCAGGAAGAACAATGTCTTCCGTGAGGATTCTGGTTCTCTTTTGCAAACAGTAAGATTAGTGCCTAAACTGCGTAAAGATTAATTAAACCCTTGTTGAATGAACTAGTGTTTGTAATCTTAATGCTAATGTATAAAGTTGTTTCTGTTAGAATTTCAAGTGCTAGTCTAAGTTTCACCTTGTATAGAAATGAAAAAGTATATAAAGGTGAAGACCTATTGCCTTAAGGTTTTGAACATAGAATGGTGTCGATTTCTTATGTGGTTGGACTCAAATCTTATTGGTATCATATCTTTTGAGTGAACCTCCTCCTCGATAAACCCAACAGTTTCTATGATTAAAAACAAATATGATTAACTTTCATATGAACTTCTTGAAATAAATGAAAGTAATTAACTGATACATCATAAGTTATTTTTATAAGCTCTCTCAAGGACTTAGAATTTGCTCACATAAACTTCTCAGAAAAGAAAAGAAAACAAATTAACTTATCTGTTTTTTTTCTTCTAAATATTCTTCTGGGAAAGTTAATCAGAACACAGAAAAGTGCTTATGTTCTATGATAAGTGCAAATAGAGTATGAAAGTGTTGTTGTTCCAACTGCATATAAATAGTTCATTGTTTGTGATTACTGATGTAGAATGATTGTTGTTCTGCACCAGATTTGGAAACTTTACCAATCAAACAGATTGGCTGAAGCTGTAGATCCATGCTTGGGAGATGAGTTTCCTGAAAGAGAAGCATCAAGGGTGTTTCAAATTGGATTACTGTGCACACAAGCTTCTGCTTCCCTTAGGCCATCCATGGCTCAAGTTGCTTGCATGTTAAGCAATTCAAATTTGGATGTGCCTATACCAAAACAACCTCCATTTTTGAACTCTAGATTACTCAGTCAAACAGCTCCTTTAGGTTTTAGCATAGATAACTCCTCATCAAACACATTTCAAAAGATTGGCGTGTCTTATAGCCCCTCTCAGTCTTCTAGTTCATGCAGCTTAATTAGACCATCCAAAAGTGAAGAAACAATTTTGGAAGCTTGA